BLASTX nr result

ID: Dioscorea21_contig00002469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002469
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317273.1| hypothetical protein POPTRDRAFT_834003 [Popu...    73   3e-11
ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Popu...    72   6e-11
gb|ABK95035.1| unknown [Populus trichocarpa]                           71   8e-11
ref|XP_002518571.1| Oxygen-evolving enhancer protein 3, chloropl...    69   5e-10
gb|AAV74404.1| chloroplast oxygen-evolving enhancer protein [Man...    69   5e-10

>ref|XP_002317273.1| hypothetical protein POPTRDRAFT_834003 [Populus trichocarpa]
           gi|222860338|gb|EEE97885.1| hypothetical protein
           POPTRDRAFT_834003 [Populus trichocarpa]
          Length = 234

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   GKLFDTISDLDHAAKIKSTAEAEKYYAKTVSALDDVLKKLG 124
           GKLFDTIS+LDHAAKIKST EAEKYYA+TVSAL+DVL KLG
Sbjct: 194 GKLFDTISNLDHAAKIKSTPEAEKYYAQTVSALNDVLAKLG 234


>ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Populus trichocarpa]
           gi|118486762|gb|ABK95216.1| unknown [Populus
           trichocarpa] gi|222848607|gb|EEE86154.1| hypothetical
           protein POPTRDRAFT_831063 [Populus trichocarpa]
          Length = 234

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   GKLFDTISDLDHAAKIKSTAEAEKYYAKTVSALDDVLKKLG 124
           GKLFDTIS+LDHAAKIKST EAEKYYA+TVS+L+DVL KLG
Sbjct: 194 GKLFDTISNLDHAAKIKSTPEAEKYYAQTVSSLNDVLAKLG 234


>gb|ABK95035.1| unknown [Populus trichocarpa]
          Length = 234

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +2

Query: 2   GKLFDTISDLDHAAKIKSTAEAEKYYAKTVSALDDVLKKLG 124
           GKLFDTI +LDHAAKIKST EAEKYYA+TVSAL+DVL KLG
Sbjct: 194 GKLFDTIGNLDHAAKIKSTPEAEKYYAQTVSALNDVLAKLG 234


>ref|XP_002518571.1| Oxygen-evolving enhancer protein 3, chloroplast precursor, putative
           [Ricinus communis] gi|223542416|gb|EEF43958.1|
           Oxygen-evolving enhancer protein 3, chloroplast
           precursor, putative [Ricinus communis]
          Length = 233

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 2   GKLFDTISDLDHAAKIKSTAEAEKYYAKTVSALDDVLKKLG 124
           GKLFD IS+LDHAAKIKST EAEKYYA+TVS L+D+L K+G
Sbjct: 193 GKLFDNISELDHAAKIKSTPEAEKYYAQTVSTLNDILAKIG 233


>gb|AAV74404.1| chloroplast oxygen-evolving enhancer protein [Manihot esculenta]
          Length = 227

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +2

Query: 2   GKLFDTISDLDHAAKIKSTAEAEKYYAKTVSALDDVLKKLG 124
           GKLF +ISDLDHAAKIKST EAEKYYA+TVS L+DVL KLG
Sbjct: 187 GKLFQSISDLDHAAKIKSTPEAEKYYAQTVSNLNDVLAKLG 227


Top