BLASTX nr result
ID: Dioscorea21_contig00002464
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00002464 (1704 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAY96403.1| hypothetical protein OsI_18300 [Oryza sativa Indi... 323 7e-86 sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 323 7e-86 ref|XP_003569054.1| PREDICTED: zinc finger CCCH domain-containin... 312 2e-82 ref|XP_002439217.1| hypothetical protein SORBIDRAFT_09g002390 [S... 307 5e-81 gb|AFW82743.1| hypothetical protein ZEAMMB73_845546 [Zea mays] 294 4e-77 >gb|EAY96403.1| hypothetical protein OsI_18300 [Oryza sativa Indica Group] Length = 579 Score = 323 bits (829), Expect = 7e-86 Identities = 200/392 (51%), Positives = 230/392 (58%), Gaps = 63/392 (16%) Frame = -2 Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999 AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG SCR GDACEYAHGVFECWLH Sbjct: 204 AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLH 263 Query: 998 PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPST------XXXXXXXXXXXXSLDMAT 837 PAQYRTRLCKDE GC RR+CFFAHKP+ELR VNPS LDMA Sbjct: 264 PAQYRTRLCKDEVGCARRICFFAHKPDELRAVNPSAVSVGMQPTVSSPRSSPPNGLDMAA 323 Query: 836 AMLLMQQPSSPTT--NRLKSTLSARNXXXXXXXXXXXXXXXXXAS------SPRSSNW-- 687 A M P+ P++ +RLK+ L AR SPR+S W Sbjct: 324 AAAAMMSPAWPSSPASRLKTALGARELDFDLEMLALDQYQQKLFDKVSGAPSPRAS-WGA 382 Query: 686 ---------PASRGSDYSEL-----------LQGLSLKQS----PYSSAS-------PSI 600 PA DY++L L LSLKQ+ YSS + P+ Sbjct: 383 AANGLATASPARAVPDYTDLLGSVDPAMLSQLHALSLKQAGDMPAYSSMADTTQMHMPTS 442 Query: 599 P---------GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSA 453 P G DHS+A AIM+SRAS+FAKRSQSFIDRG A A +S ++P ++ APS Sbjct: 443 PMVGGANTAFGLDHSMAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTG-APSI 501 Query: 452 GFSGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGA---ATPAALDEPDLSWVQSLVKD 282 S WGSP GKLDWG++G+EL+KLRKSASF FR A AT AA EPD+SWV SLVKD Sbjct: 502 -LSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQSAMPVATHAAAAEPDVSWVNSLVKD 560 Query: 281 APAQAGAPMQYGLETGSAEMLPSWAE-EQMVA 189 A + ++ W E EQMVA Sbjct: 561 GHA-------------AGDIFAQWPEQEQMVA 579 Score = 77.8 bits (190), Expect = 8e-12 Identities = 43/104 (41%), Positives = 61/104 (58%) Frame = -1 Query: 1704 SAGRDRRMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCA 1525 SA R+G RT +AA+YGS VL Y+++ + A + R S D AT LH+A AG A Sbjct: 39 SASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPA-EAARASETDGATPLHMAAAGGA 97 Query: 1524 PGSIDAIKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTL 1393 ++ A +LL++A A VDAL A G R DL+P+ A ++ L Sbjct: 98 ANAVAATRLLLAAGASVDALSASGLRAGDLLPRATAAEKAIRLL 141 >sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 33; Short=OsC3H33 gi|51854363|gb|AAU10743.1| putative finger transcription factor [Oryza sativa Japonica Group] gi|215740698|dbj|BAG97354.1| unnamed protein product [Oryza sativa Japonica Group] gi|217030947|gb|ACJ74074.1| zinc finger protein [Oryza sativa Japonica Group] gi|222630067|gb|EEE62199.1| hypothetical protein OsJ_16986 [Oryza sativa Japonica Group] Length = 601 Score = 323 bits (829), Expect = 7e-86 Identities = 200/392 (51%), Positives = 230/392 (58%), Gaps = 63/392 (16%) Frame = -2 Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999 AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG SCR GDACEYAHGVFECWLH Sbjct: 226 AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLH 285 Query: 998 PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPST------XXXXXXXXXXXXSLDMAT 837 PAQYRTRLCKDE GC RR+CFFAHKP+ELR VNPS LDMA Sbjct: 286 PAQYRTRLCKDEVGCARRICFFAHKPDELRAVNPSAVSVGMQPTVSSPRSSPPNGLDMAA 345 Query: 836 AMLLMQQPSSPTT--NRLKSTLSARNXXXXXXXXXXXXXXXXXAS------SPRSSNW-- 687 A M P+ P++ +RLK+ L AR SPR+S W Sbjct: 346 AAAAMMSPAWPSSPASRLKTALGARELDFDLEMLALDQYQQKLFDKVSGAPSPRAS-WGA 404 Query: 686 ---------PASRGSDYSEL-----------LQGLSLKQS----PYSSAS-------PSI 600 PA DY++L L LSLKQ+ YSS + P+ Sbjct: 405 AANGLATASPARAVPDYTDLLGSVDPAMLSQLHALSLKQAGDMPAYSSMADTTQMHMPTS 464 Query: 599 P---------GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSA 453 P G DHS+A AIM+SRAS+FAKRSQSFIDRG A A +S ++P ++ APS Sbjct: 465 PMVGGANTAFGLDHSMAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTG-APSI 523 Query: 452 GFSGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGA---ATPAALDEPDLSWVQSLVKD 282 S WGSP GKLDWG++G+EL+KLRKSASF FR A AT AA EPD+SWV SLVKD Sbjct: 524 -LSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQSAMPVATHAAAAEPDVSWVNSLVKD 582 Query: 281 APAQAGAPMQYGLETGSAEMLPSWAE-EQMVA 189 A + ++ W E EQMVA Sbjct: 583 GHA-------------AGDIFAQWPEQEQMVA 601 Score = 77.8 bits (190), Expect = 8e-12 Identities = 43/104 (41%), Positives = 61/104 (58%) Frame = -1 Query: 1704 SAGRDRRMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCA 1525 SA R+G RT +AA+YGS VL Y+++ + A + R S D AT LH+A AG A Sbjct: 61 SASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPA-EAARASETDGATPLHMAAAGGA 119 Query: 1524 PGSIDAIKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTL 1393 ++ A +LL++A A VDAL A G R DL+P+ A ++ L Sbjct: 120 ANAVAATRLLLAAGASVDALSASGLRAGDLLPRATAAEKAIRLL 163 >ref|XP_003569054.1| PREDICTED: zinc finger CCCH domain-containing protein 33-like [Brachypodium distachyon] Length = 599 Score = 312 bits (800), Expect = 2e-82 Identities = 195/394 (49%), Positives = 222/394 (56%), Gaps = 65/394 (16%) Frame = -2 Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999 AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG SCR GD CEYAHGVFECWLH Sbjct: 221 AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDGCEYAHGVFECWLH 280 Query: 998 PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPS--TXXXXXXXXXXXXSLDMATAMLL 825 PAQYRTRLCKDE GC RR+CFFAHK +ELR VNPS + M ML Sbjct: 281 PAQYRTRLCKDEVGCARRICFFAHKRDELRAVNPSAVSVGMQPSSPRSSPPNGMDMGMLN 340 Query: 824 MQQPSSPTTNRLKSTLSA---RNXXXXXXXXXXXXXXXXXASSPRSSNWPASRGS----- 669 PSSP ++RLK+ A+SPR +NW A+ G Sbjct: 341 PAWPSSPASSRLKTARELDFDLEMLALDQYQQKLFDKVSNAASPR-ANWGAANGGLGSPH 399 Query: 668 -----------DYSEL-----------LQGLSLKQ----SPYSSA------SPSIP---- 597 DYS+L L LSLKQ SPYSS P+ P Sbjct: 400 AVAQAPPRNMPDYSDLLGSMDTAMLSQLHALSLKQAGDMSPYSSLPDTQLHMPTSPMVGA 459 Query: 596 ----GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAV--------AP 459 G DHS+A AIM+SRAS+FAKRSQSFIDRG A A +S ++P + +P Sbjct: 460 NTSFGLDHSMAKAIMSSRASAFAKRSQSFIDRGARAPAARSLMSPATMGEPSMLTDWGSP 519 Query: 458 SAGFSGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGA---ATPAALDEPDLSWVQSLV 288 S WGSPSGKLDWG++G+EL+K RKSASFGFR A A+ A EPD+SWV SLV Sbjct: 520 SGNNMDWGSPSGKLDWGVQGDELHKFRKSASFGFRAQSAMPVASQATQAEPDVSWVNSLV 579 Query: 287 KDAPAQAGAPMQYGLETGSAEMLPSWAE-EQMVA 189 KD S + W E EQMVA Sbjct: 580 KDG--------------HSGDHFAQWLEQEQMVA 599 Score = 79.7 bits (195), Expect = 2e-12 Identities = 49/110 (44%), Positives = 64/110 (58%) Frame = -1 Query: 1704 SAGRDRRMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCA 1525 SA RR+G RTP +AA+YGS VL Y LS + + R S D ATALH+A AG A Sbjct: 54 SAAVGRRLGMESRTPAMVAALYGSTGVLAYALSAAPR-EACRASPTDGATALHMAAAGGA 112 Query: 1524 PGSIDAIKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTLETLVKA 1375 G++ A LL++A A +AL A G R DL+P+ A K L L+K+ Sbjct: 113 AGAVAATHLLLAAGASTEALSASGLRAGDLLPR--AAGPADKPLRVLLKS 160 >ref|XP_002439217.1| hypothetical protein SORBIDRAFT_09g002390 [Sorghum bicolor] gi|241944502|gb|EES17647.1| hypothetical protein SORBIDRAFT_09g002390 [Sorghum bicolor] Length = 611 Score = 307 bits (787), Expect = 5e-81 Identities = 193/387 (49%), Positives = 219/387 (56%), Gaps = 58/387 (14%) Frame = -2 Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999 AYSHDWTECPF HP ENARRRDPR+Y YSCVPCPEFRKG +CR GD CEYAHGVFECWLH Sbjct: 242 AYSHDWTECPFEHPDENARRRDPRRYSYSCVPCPEFRKGGACRKGDNCEYAHGVFECWLH 301 Query: 998 PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPST------XXXXXXXXXXXXSLDMAT 837 PAQYRTRLCKDE GC RR+CFFAHKPEELR VNPS LDM Sbjct: 302 PAQYRTRLCKDEVGCARRICFFAHKPEELRAVNPSAVSVGMQPTVSSPRSSPPNGLDMGG 361 Query: 836 AMLLMQQPSSPTTNRLKSTLSARN---XXXXXXXXXXXXXXXXXASSPRSSNW------- 687 ML PSSP +RLK+ L+ R SSPR+S W Sbjct: 362 GMLNPAWPSSP-ASRLKTALAGRELDFDLELLALDQYQQKLFDKVSSPRAS-WGSAGGIG 419 Query: 686 -------PASRGSDYSEL-----------LQGLSLKQS----PYSSAS------PSIP-- 597 PA DY++L L LSLKQ+ YSS + P+ P Sbjct: 420 SPLPAASPARTVPDYTDLLGSVDPAMLSQLHALSLKQAGDMPAYSSMADTQLHMPTSPMV 479 Query: 596 -------GFDHS-LATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSAGF 447 G DHS +A AIM+SRAS+FAKRSQSFIDRG A A +S ++ S+ APS Sbjct: 480 GGPNTAFGLDHSAMAKAIMSSRASAFAKRSQSFIDRGGRAPATRSLMSQQSTTGAPSM-L 538 Query: 446 SGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGAATPAALDEPDLSWVQSLVKDAPAQA 267 S WGSP GKLDWG++G+EL+K RKSASF FR A EPD+SWV SLVKD A Sbjct: 539 SDWGSPDGKLDWGVQGDELHKFRKSASFAFRGQSPAPVPTPAEPDVSWVNSLVKDGHA-- 596 Query: 266 GAPMQYGLETGSAEMLPSWAE-EQMVA 189 ++ W E EQMVA Sbjct: 597 ------------GDIFAQWPEQEQMVA 611 Score = 78.2 bits (191), Expect = 6e-12 Identities = 46/104 (44%), Positives = 61/104 (58%) Frame = -1 Query: 1686 RMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCAPGSIDA 1507 R+ RTP +AA+YGS SVL Y+LS + A + R S D AT LHLA AG A G++ A Sbjct: 70 RLRLEARTPAMVAALYGSASVLAYVLSSAPA-EAARASPTDGATPLHLAAAGGAAGAVAA 128 Query: 1506 IKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTLETLVKA 1375 LL++A A DAL G R DL+P+ A + L L+K+ Sbjct: 129 THLLLAAGASADALAFSGLRAGDLLPRANAAADRDRALRVLLKS 172 >gb|AFW82743.1| hypothetical protein ZEAMMB73_845546 [Zea mays] Length = 372 Score = 294 bits (753), Expect = 4e-77 Identities = 178/382 (46%), Positives = 211/382 (55%), Gaps = 53/382 (13%) Frame = -2 Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999 AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG +CR GD CEYAHGVFECWLH Sbjct: 12 AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGACRKGDGCEYAHGVFECWLH 71 Query: 998 PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPSTXXXXXXXXXXXXS---LDMATAML 828 PAQYRTRLCKDE GC RR+CFFAHK EELR VNPS + + Sbjct: 72 PAQYRTRLCKDEVGCARRICFFAHKREELRAVNPSAVSVGMQMQPTVSPPPPSGLGDMLS 131 Query: 827 LMQQPSSPTTNRLKSTLSARNXXXXXXXXXXXXXXXXXASSPRSSNW-----------PA 681 PSSP + K+ L SSPR+ NW PA Sbjct: 132 PAAWPSSPASRLNKAALGGGRDLDLDQYQHMLFDTV---SSPRA-NWGSAGGIGSPLPPA 187 Query: 680 SRGSDYSELL------------QGLSLKQS---------------PY-SSASPSIP---- 597 DY++LL LSLKQ+ P+ ++ SP + Sbjct: 188 RAVPDYADLLGSVDAASMLSQLHALSLKQAGGDMPAYGSMVADTQPHMATTSPMVGLGSS 247 Query: 596 ---GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSAGFSGWGS 432 G DHS+A AI++SRAS+FAKRSQSF+DRG A A +S ++ ++A S W S Sbjct: 248 TAFGLDHSMAKAILSSRASAFAKRSQSFVDRGGRAPAARSLMSQQAAAAGAPPVLSDWAS 307 Query: 431 PSGKLDWGIEGEELNKLRKSASFGFRNNGAATPAALDEPDLSWVQSLVKDAPAQAGAPMQ 252 P G+LDWG++G+EL+K RKSASF FR PA EPD+SWV SLVKD A Sbjct: 308 PDGRLDWGVQGDELHKFRKSASFAFRARSPPPPA---EPDVSWVSSLVKDGHA------- 357 Query: 251 YGLETGSAEMLPSWAE-EQMVA 189 ++ W E EQMVA Sbjct: 358 -------GDIFAQWPELEQMVA 372