BLASTX nr result

ID: Dioscorea21_contig00002464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002464
         (1704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY96403.1| hypothetical protein OsI_18300 [Oryza sativa Indi...   323   7e-86
sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CCCH domain-co...   323   7e-86
ref|XP_003569054.1| PREDICTED: zinc finger CCCH domain-containin...   312   2e-82
ref|XP_002439217.1| hypothetical protein SORBIDRAFT_09g002390 [S...   307   5e-81
gb|AFW82743.1| hypothetical protein ZEAMMB73_845546 [Zea mays]        294   4e-77

>gb|EAY96403.1| hypothetical protein OsI_18300 [Oryza sativa Indica Group]
          Length = 579

 Score =  323 bits (829), Expect = 7e-86
 Identities = 200/392 (51%), Positives = 230/392 (58%), Gaps = 63/392 (16%)
 Frame = -2

Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999
            AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG SCR GDACEYAHGVFECWLH
Sbjct: 204  AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLH 263

Query: 998  PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPST------XXXXXXXXXXXXSLDMAT 837
            PAQYRTRLCKDE GC RR+CFFAHKP+ELR VNPS                    LDMA 
Sbjct: 264  PAQYRTRLCKDEVGCARRICFFAHKPDELRAVNPSAVSVGMQPTVSSPRSSPPNGLDMAA 323

Query: 836  AMLLMQQPSSPTT--NRLKSTLSARNXXXXXXXXXXXXXXXXXAS------SPRSSNW-- 687
            A   M  P+ P++  +RLK+ L AR                          SPR+S W  
Sbjct: 324  AAAAMMSPAWPSSPASRLKTALGARELDFDLEMLALDQYQQKLFDKVSGAPSPRAS-WGA 382

Query: 686  ---------PASRGSDYSEL-----------LQGLSLKQS----PYSSAS-------PSI 600
                     PA    DY++L           L  LSLKQ+     YSS +       P+ 
Sbjct: 383  AANGLATASPARAVPDYTDLLGSVDPAMLSQLHALSLKQAGDMPAYSSMADTTQMHMPTS 442

Query: 599  P---------GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSA 453
            P         G DHS+A AIM+SRAS+FAKRSQSFIDRG  A A +S ++P ++  APS 
Sbjct: 443  PMVGGANTAFGLDHSMAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTG-APSI 501

Query: 452  GFSGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGA---ATPAALDEPDLSWVQSLVKD 282
              S WGSP GKLDWG++G+EL+KLRKSASF FR   A   AT AA  EPD+SWV SLVKD
Sbjct: 502  -LSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQSAMPVATHAAAAEPDVSWVNSLVKD 560

Query: 281  APAQAGAPMQYGLETGSAEMLPSWAE-EQMVA 189
              A             + ++   W E EQMVA
Sbjct: 561  GHA-------------AGDIFAQWPEQEQMVA 579



 Score = 77.8 bits (190), Expect = 8e-12
 Identities = 43/104 (41%), Positives = 61/104 (58%)
 Frame = -1

Query: 1704 SAGRDRRMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCA 1525
            SA    R+G   RT   +AA+YGS  VL Y+++ + A +  R S  D AT LH+A AG A
Sbjct: 39   SASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPA-EAARASETDGATPLHMAAAGGA 97

Query: 1524 PGSIDAIKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTL 1393
              ++ A +LL++A A VDAL A G R  DL+P+  A    ++ L
Sbjct: 98   ANAVAATRLLLAAGASVDALSASGLRAGDLLPRATAAEKAIRLL 141


>sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 33;
            Short=OsC3H33 gi|51854363|gb|AAU10743.1| putative finger
            transcription factor [Oryza sativa Japonica Group]
            gi|215740698|dbj|BAG97354.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|217030947|gb|ACJ74074.1|
            zinc finger protein [Oryza sativa Japonica Group]
            gi|222630067|gb|EEE62199.1| hypothetical protein
            OsJ_16986 [Oryza sativa Japonica Group]
          Length = 601

 Score =  323 bits (829), Expect = 7e-86
 Identities = 200/392 (51%), Positives = 230/392 (58%), Gaps = 63/392 (16%)
 Frame = -2

Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999
            AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG SCR GDACEYAHGVFECWLH
Sbjct: 226  AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLH 285

Query: 998  PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPST------XXXXXXXXXXXXSLDMAT 837
            PAQYRTRLCKDE GC RR+CFFAHKP+ELR VNPS                    LDMA 
Sbjct: 286  PAQYRTRLCKDEVGCARRICFFAHKPDELRAVNPSAVSVGMQPTVSSPRSSPPNGLDMAA 345

Query: 836  AMLLMQQPSSPTT--NRLKSTLSARNXXXXXXXXXXXXXXXXXAS------SPRSSNW-- 687
            A   M  P+ P++  +RLK+ L AR                          SPR+S W  
Sbjct: 346  AAAAMMSPAWPSSPASRLKTALGARELDFDLEMLALDQYQQKLFDKVSGAPSPRAS-WGA 404

Query: 686  ---------PASRGSDYSEL-----------LQGLSLKQS----PYSSAS-------PSI 600
                     PA    DY++L           L  LSLKQ+     YSS +       P+ 
Sbjct: 405  AANGLATASPARAVPDYTDLLGSVDPAMLSQLHALSLKQAGDMPAYSSMADTTQMHMPTS 464

Query: 599  P---------GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSA 453
            P         G DHS+A AIM+SRAS+FAKRSQSFIDRG  A A +S ++P ++  APS 
Sbjct: 465  PMVGGANTAFGLDHSMAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTG-APSI 523

Query: 452  GFSGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGA---ATPAALDEPDLSWVQSLVKD 282
              S WGSP GKLDWG++G+EL+KLRKSASF FR   A   AT AA  EPD+SWV SLVKD
Sbjct: 524  -LSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQSAMPVATHAAAAEPDVSWVNSLVKD 582

Query: 281  APAQAGAPMQYGLETGSAEMLPSWAE-EQMVA 189
              A             + ++   W E EQMVA
Sbjct: 583  GHA-------------AGDIFAQWPEQEQMVA 601



 Score = 77.8 bits (190), Expect = 8e-12
 Identities = 43/104 (41%), Positives = 61/104 (58%)
 Frame = -1

Query: 1704 SAGRDRRMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCA 1525
            SA    R+G   RT   +AA+YGS  VL Y+++ + A +  R S  D AT LH+A AG A
Sbjct: 61   SASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPA-EAARASETDGATPLHMAAAGGA 119

Query: 1524 PGSIDAIKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTL 1393
              ++ A +LL++A A VDAL A G R  DL+P+  A    ++ L
Sbjct: 120  ANAVAATRLLLAAGASVDALSASGLRAGDLLPRATAAEKAIRLL 163


>ref|XP_003569054.1| PREDICTED: zinc finger CCCH domain-containing protein 33-like
            [Brachypodium distachyon]
          Length = 599

 Score =  312 bits (800), Expect = 2e-82
 Identities = 195/394 (49%), Positives = 222/394 (56%), Gaps = 65/394 (16%)
 Frame = -2

Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999
            AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG SCR GD CEYAHGVFECWLH
Sbjct: 221  AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDGCEYAHGVFECWLH 280

Query: 998  PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPS--TXXXXXXXXXXXXSLDMATAMLL 825
            PAQYRTRLCKDE GC RR+CFFAHK +ELR VNPS  +               M   ML 
Sbjct: 281  PAQYRTRLCKDEVGCARRICFFAHKRDELRAVNPSAVSVGMQPSSPRSSPPNGMDMGMLN 340

Query: 824  MQQPSSPTTNRLKSTLSA---RNXXXXXXXXXXXXXXXXXASSPRSSNWPASRGS----- 669
               PSSP ++RLK+                          A+SPR +NW A+ G      
Sbjct: 341  PAWPSSPASSRLKTARELDFDLEMLALDQYQQKLFDKVSNAASPR-ANWGAANGGLGSPH 399

Query: 668  -----------DYSEL-----------LQGLSLKQ----SPYSSA------SPSIP---- 597
                       DYS+L           L  LSLKQ    SPYSS        P+ P    
Sbjct: 400  AVAQAPPRNMPDYSDLLGSMDTAMLSQLHALSLKQAGDMSPYSSLPDTQLHMPTSPMVGA 459

Query: 596  ----GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAV--------AP 459
                G DHS+A AIM+SRAS+FAKRSQSFIDRG  A A +S ++P +           +P
Sbjct: 460  NTSFGLDHSMAKAIMSSRASAFAKRSQSFIDRGARAPAARSLMSPATMGEPSMLTDWGSP 519

Query: 458  SAGFSGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGA---ATPAALDEPDLSWVQSLV 288
            S     WGSPSGKLDWG++G+EL+K RKSASFGFR   A   A+ A   EPD+SWV SLV
Sbjct: 520  SGNNMDWGSPSGKLDWGVQGDELHKFRKSASFGFRAQSAMPVASQATQAEPDVSWVNSLV 579

Query: 287  KDAPAQAGAPMQYGLETGSAEMLPSWAE-EQMVA 189
            KD                S +    W E EQMVA
Sbjct: 580  KDG--------------HSGDHFAQWLEQEQMVA 599



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 49/110 (44%), Positives = 64/110 (58%)
 Frame = -1

Query: 1704 SAGRDRRMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCA 1525
            SA   RR+G   RTP  +AA+YGS  VL Y LS +   +  R S  D ATALH+A AG A
Sbjct: 54   SAAVGRRLGMESRTPAMVAALYGSTGVLAYALSAAPR-EACRASPTDGATALHMAAAGGA 112

Query: 1524 PGSIDAIKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTLETLVKA 1375
             G++ A  LL++A A  +AL A G R  DL+P+  A     K L  L+K+
Sbjct: 113  AGAVAATHLLLAAGASTEALSASGLRAGDLLPR--AAGPADKPLRVLLKS 160


>ref|XP_002439217.1| hypothetical protein SORBIDRAFT_09g002390 [Sorghum bicolor]
            gi|241944502|gb|EES17647.1| hypothetical protein
            SORBIDRAFT_09g002390 [Sorghum bicolor]
          Length = 611

 Score =  307 bits (787), Expect = 5e-81
 Identities = 193/387 (49%), Positives = 219/387 (56%), Gaps = 58/387 (14%)
 Frame = -2

Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999
            AYSHDWTECPF HP ENARRRDPR+Y YSCVPCPEFRKG +CR GD CEYAHGVFECWLH
Sbjct: 242  AYSHDWTECPFEHPDENARRRDPRRYSYSCVPCPEFRKGGACRKGDNCEYAHGVFECWLH 301

Query: 998  PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPST------XXXXXXXXXXXXSLDMAT 837
            PAQYRTRLCKDE GC RR+CFFAHKPEELR VNPS                    LDM  
Sbjct: 302  PAQYRTRLCKDEVGCARRICFFAHKPEELRAVNPSAVSVGMQPTVSSPRSSPPNGLDMGG 361

Query: 836  AMLLMQQPSSPTTNRLKSTLSARN---XXXXXXXXXXXXXXXXXASSPRSSNW------- 687
             ML    PSSP  +RLK+ L+ R                      SSPR+S W       
Sbjct: 362  GMLNPAWPSSP-ASRLKTALAGRELDFDLELLALDQYQQKLFDKVSSPRAS-WGSAGGIG 419

Query: 686  -------PASRGSDYSEL-----------LQGLSLKQS----PYSSAS------PSIP-- 597
                   PA    DY++L           L  LSLKQ+     YSS +      P+ P  
Sbjct: 420  SPLPAASPARTVPDYTDLLGSVDPAMLSQLHALSLKQAGDMPAYSSMADTQLHMPTSPMV 479

Query: 596  -------GFDHS-LATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSAGF 447
                   G DHS +A AIM+SRAS+FAKRSQSFIDRG  A A +S ++  S+  APS   
Sbjct: 480  GGPNTAFGLDHSAMAKAIMSSRASAFAKRSQSFIDRGGRAPATRSLMSQQSTTGAPSM-L 538

Query: 446  SGWGSPSGKLDWGIEGEELNKLRKSASFGFRNNGAATPAALDEPDLSWVQSLVKDAPAQA 267
            S WGSP GKLDWG++G+EL+K RKSASF FR    A      EPD+SWV SLVKD  A  
Sbjct: 539  SDWGSPDGKLDWGVQGDELHKFRKSASFAFRGQSPAPVPTPAEPDVSWVNSLVKDGHA-- 596

Query: 266  GAPMQYGLETGSAEMLPSWAE-EQMVA 189
                         ++   W E EQMVA
Sbjct: 597  ------------GDIFAQWPEQEQMVA 611



 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 46/104 (44%), Positives = 61/104 (58%)
 Frame = -1

Query: 1686 RMGFNLRTPLQIAAVYGSISVLNYILSDSTAVDVNRRSGDDAATALHLAVAGCAPGSIDA 1507
            R+    RTP  +AA+YGS SVL Y+LS + A +  R S  D AT LHLA AG A G++ A
Sbjct: 70   RLRLEARTPAMVAALYGSASVLAYVLSSAPA-EAARASPTDGATPLHLAAAGGAAGAVAA 128

Query: 1506 IKLLVSANADVDALDAGGNRPADLIPKLIALNSVVKTLETLVKA 1375
              LL++A A  DAL   G R  DL+P+  A     + L  L+K+
Sbjct: 129  THLLLAAGASADALAFSGLRAGDLLPRANAAADRDRALRVLLKS 172


>gb|AFW82743.1| hypothetical protein ZEAMMB73_845546 [Zea mays]
          Length = 372

 Score =  294 bits (753), Expect = 4e-77
 Identities = 178/382 (46%), Positives = 211/382 (55%), Gaps = 53/382 (13%)
 Frame = -2

Query: 1175 AYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKG-SCRSGDACEYAHGVFECWLH 999
            AYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRKG +CR GD CEYAHGVFECWLH
Sbjct: 12   AYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGACRKGDGCEYAHGVFECWLH 71

Query: 998  PAQYRTRLCKDETGCNRRVCFFAHKPEELRMVNPSTXXXXXXXXXXXXS---LDMATAML 828
            PAQYRTRLCKDE GC RR+CFFAHK EELR VNPS                   +   + 
Sbjct: 72   PAQYRTRLCKDEVGCARRICFFAHKREELRAVNPSAVSVGMQMQPTVSPPPPSGLGDMLS 131

Query: 827  LMQQPSSPTTNRLKSTLSARNXXXXXXXXXXXXXXXXXASSPRSSNW-----------PA 681
                PSSP +   K+ L                      SSPR+ NW           PA
Sbjct: 132  PAAWPSSPASRLNKAALGGGRDLDLDQYQHMLFDTV---SSPRA-NWGSAGGIGSPLPPA 187

Query: 680  SRGSDYSELL------------QGLSLKQS---------------PY-SSASPSIP---- 597
                DY++LL              LSLKQ+               P+ ++ SP +     
Sbjct: 188  RAVPDYADLLGSVDAASMLSQLHALSLKQAGGDMPAYGSMVADTQPHMATTSPMVGLGSS 247

Query: 596  ---GFDHSLATAIMNSRASSFAKRSQSFIDRG--AVARQSTLAPTSSAVAPSAGFSGWGS 432
               G DHS+A AI++SRAS+FAKRSQSF+DRG  A A +S ++  ++A       S W S
Sbjct: 248  TAFGLDHSMAKAILSSRASAFAKRSQSFVDRGGRAPAARSLMSQQAAAAGAPPVLSDWAS 307

Query: 431  PSGKLDWGIEGEELNKLRKSASFGFRNNGAATPAALDEPDLSWVQSLVKDAPAQAGAPMQ 252
            P G+LDWG++G+EL+K RKSASF FR      PA   EPD+SWV SLVKD  A       
Sbjct: 308  PDGRLDWGVQGDELHKFRKSASFAFRARSPPPPA---EPDVSWVSSLVKDGHA------- 357

Query: 251  YGLETGSAEMLPSWAE-EQMVA 189
                    ++   W E EQMVA
Sbjct: 358  -------GDIFAQWPELEQMVA 372


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