BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002462
         (1526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]        547   e-153
ref|XP_002519282.1| tex protein-relatedtranscription accessory p...   524   e-146
ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop...   520   e-145
ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop...   516   e-144
ref|XP_002316061.1| predicted protein [Populus trichocarpa] gi|2...   509   e-142

>gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]
          Length = 415

 Score =  547 bits (1409), Expect = e-153
 Identities = 301/410 (73%), Positives = 315/410 (76%), Gaps = 6/410 (1%)
 Frame = +2

Query: 110  MAALLN-QFCGLRCXXXXXXXXXXXXXXXXXXTGKRVS----TVVSAYYALTSEQKERLK 274
            MA+ +N QF GLRC                     R S     V++  YALTS QKER K
Sbjct: 1    MASFVNHQFAGLRCPPLSSSPLSKPSSAASSKAPARPSFCSAAVIAGTYALTSAQKERQK 60

Query: 275  LKEVFEEAYERCRTAPMEGVSFTVEDFTAALDKYDFDSEIGTKVKGTVFMTDNGGAVVDI 454
            LKEVFEEAY+RCRTAPMEGV+FTVEDF +AL+KYDFDSEIGTKVKGTVFMTD  GA+VDI
Sbjct: 61   LKEVFEEAYDRCRTAPMEGVAFTVEDFHSALEKYDFDSEIGTKVKGTVFMTDMNGALVDI 120

Query: 455  IAKSSAYLPVQEACIHRIKHVSEAGIYPGLVEEFVIIGEKPSDDSLILSLRAIQYDLAWE 634
             AKSSAYLPVQEACIH+IKHVSEAGIYPGLVEEFVIIGE  +DDSLILSLR+IQYDLAWE
Sbjct: 121  TAKSSAYLPVQEACIHKIKHVSEAGIYPGLVEEFVIIGEMNADDSLILSLRSIQYDLAWE 180

Query: 635  RCRQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TAEELIDKELPLKFVE 811
            RCRQL                                       TAEELIDKELPLKFVE
Sbjct: 181  RCRQLQAEDVIVKGKVVGGNKGGVVAIVEGLRGFVPFSQISAKSTAEELIDKELPLKFVE 240

Query: 812  VDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHD 991
            VDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAF+DIGGINGLLHVSQISHD
Sbjct: 241  VDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFVDIGGINGLLHVSQISHD 300

Query: 992  RVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQT 1171
            RVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQ 
Sbjct: 301  RVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQI 360

Query: 1172 FRQRIAQAEAMARADMLRFQPEXXXXXXXXXXXXXXTPDLPAEGLDLSDI 1321
            FRQRIAQAEAMARADMLRFQPE              T DLPAEGLDLS+I
Sbjct: 361  FRQRIAQAEAMARADMLRFQPESGLTLNSEGILGPLTSDLPAEGLDLSEI 410


>ref|XP_002519282.1| tex protein-relatedtranscription accessory protein, putative [Ricinus
            communis] gi|223541597|gb|EEF43146.1| tex
            protein-relatedtranscription accessory protein, putative
            [Ricinus communis]
          Length = 412

 Score =  524 bits (1350), Expect = e-146
 Identities = 285/407 (70%), Positives = 308/407 (75%), Gaps = 3/407 (0%)
 Frame = +2

Query: 110  MAALLNQFCGLRCXXXXXXXXXXXXXXXXXXTGKRVST-VVSAYYALTSEQKERLKLKEV 286
            MA+L  QF GLRC                  +  R S  VVSA     ++ KER KLK++
Sbjct: 1    MASLAQQFTGLRCTALSNCRVTKKASSLLSSSRPRKSRFVVSAVAISNAQTKEREKLKQL 60

Query: 287  FEEAYERCRTAPMEGVSFTVEDFTAALDKYDFDSEIGTKVKGTVFMTDNGGAVVDIIAKS 466
            FE+AYERCRTAPMEGV+FT EDF +AL+KYDF+SEIGT VKGTVFMTD  GAVVDI AKS
Sbjct: 61   FEDAYERCRTAPMEGVAFTAEDFHSALEKYDFNSEIGTTVKGTVFMTDANGAVVDITAKS 120

Query: 467  SAYLPVQEACIHRIKHVSEAGIYPGLVEEFVIIGEKPSDDSLILSLRAIQYDLAWERCRQ 646
            SAYLPVQEACIH+IKHV EAGI PGL +EFVIIGE  +DDSLILSLRAIQYDL+WERCRQ
Sbjct: 121  SAYLPVQEACIHKIKHVEEAGIVPGLTQEFVIIGENEADDSLILSLRAIQYDLSWERCRQ 180

Query: 647  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TAEELIDKELPLKFVEVDE 820
            L                                        TAEEL++KELPLKFV+VDE
Sbjct: 181  LQAEDVIVKGKVVGANKGGVVAIVEGGLRGFVPFSQISSKSTAEELLEKELPLKFVDVDE 240

Query: 821  EQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 1000
            EQSRLVLSNRKAMADSQAQLGIGSVV+GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS
Sbjct: 241  EQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 300

Query: 1001 DISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQTFRQ 1180
            DI+TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKA+EMAQTFRQ
Sbjct: 301  DIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ 360

Query: 1181 RIAQAEAMARADMLRFQPEXXXXXXXXXXXXXXTPDLPAEGLDLSDI 1321
            RIAQAEAMARADMLRFQPE              T D+PAEGLDLSD+
Sbjct: 361  RIAQAEAMARADMLRFQPESGLSLSSDGILGPVTSDMPAEGLDLSDV 407


>ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis
            sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S
            ribosomal protein S1, chloroplastic-like [Cucumis
            sativus]
          Length = 413

 Score =  520 bits (1338), Expect = e-145
 Identities = 279/408 (68%), Positives = 306/408 (75%), Gaps = 4/408 (0%)
 Frame = +2

Query: 110  MAALLNQFCGLRCXXXXXXXXXXXXXXXXXXTGKRVSTVVSAYYA---LTSEQKERLKLK 280
            MA++  QF GLRC                     R   V +A  +    + + +ER KLK
Sbjct: 1    MASMAQQFTGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISGPIPSPQTRERFKLK 60

Query: 281  EVFEEAYERCRTAPMEGVSFTVEDFTAALDKYDFDSEIGTKVKGTVFMTDNGGAVVDIIA 460
            EVFEEAYERCR AP+EG+SFT+EDF AAL+KYDFDSE+GTKVKGTVF TDN GA+VDI A
Sbjct: 61   EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 461  KSSAYLPVQEACIHRIKHVSEAGIYPGLVEEFVIIGEKPSDDSLILSLRAIQYDLAWERC 640
            KSSAYLP+QEACIHRIKHV EAG++PGL EEFVIIGE  SDDSLILSLR+IQYDLAWERC
Sbjct: 121  KSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 641  RQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-AEELIDKELPLKFVEVD 817
            RQL                                      + AEEL+ KELPLKFVEVD
Sbjct: 181  RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFVEVD 240

Query: 818  EEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRV 997
            EEQSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDR+
Sbjct: 241  EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 998  SDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQTFR 1177
            SDI+TVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKA+EMAQTFR
Sbjct: 301  SDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 1178 QRIAQAEAMARADMLRFQPEXXXXXXXXXXXXXXTPDLPAEGLDLSDI 1321
            QRIAQAEA+ARADMLRFQPE              TP+LP EGLDL+D+
Sbjct: 361  QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDV 408


>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
            gi|296083203|emb|CBI22839.3| unnamed protein product
            [Vitis vinifera]
          Length = 410

 Score =  516 bits (1329), Expect = e-144
 Identities = 282/405 (69%), Positives = 302/405 (74%), Gaps = 1/405 (0%)
 Frame = +2

Query: 110  MAALLNQFCGLRCXXXXXXXXXXXXXXXXXXTGKRVSTVVSAYYALTSEQKERLKLKEVF 289
            MA L  QF GLRC                      V  +VSA     ++ KERLKLKE+F
Sbjct: 1    MACLAQQFTGLRCPPISSSRLSKPFSPKQPQKPSFVR-IVSAVAISNAQTKERLKLKEMF 59

Query: 290  EEAYERCRTAPMEGVSFTVEDFTAALDKYDFDSEIGTKVKGTVFMTDNGGAVVDIIAKSS 469
            E+AYERCRTAP EGVSF+ +DF +ALDKYDF+SEIGTKVKGTVF TD  GA+VDI AKSS
Sbjct: 60   EDAYERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSS 119

Query: 470  AYLPVQEACIHRIKHVSEAGIYPGLVEEFVIIGEKPSDDSLILSLRAIQYDLAWERCRQL 649
            AYLPV EACIH+IKHV EAGI PG+ EEFVIIGE  +DDSLILSLR+IQYDLAWERCRQL
Sbjct: 120  AYLPVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLAWERCRQL 179

Query: 650  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-AEELIDKELPLKFVEVDEEQ 826
                                                  T AEEL+DKELP+KFVEVDEEQ
Sbjct: 180  QAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKELPVKFVEVDEEQ 239

Query: 827  SRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 1006
            SRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
Sbjct: 240  SRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 299

Query: 1007 STVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQTFRQRI 1186
            +TVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKA+EMAQTFRQRI
Sbjct: 300  ATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 359

Query: 1187 AQAEAMARADMLRFQPEXXXXXXXXXXXXXXTPDLPAEGLDLSDI 1321
            AQAEAMARADMLRFQPE              + DLPAEGLDLSD+
Sbjct: 360  AQAEAMARADMLRFQPESGLTLNSDGILGPVSADLPAEGLDLSDV 404


>ref|XP_002316061.1| predicted protein [Populus trichocarpa] gi|222865101|gb|EEF02232.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score =  509 bits (1312), Expect = e-142
 Identities = 280/406 (68%), Positives = 303/406 (74%), Gaps = 2/406 (0%)
 Frame = +2

Query: 110  MAALLNQFCGLRCXXXXXXXXXXXXXXXXXXTGKRVSTVVSAYYALTSEQ-KERLKLKEV 286
            MA+L  QF GL C                       S V +   A+++ Q KER KLKE+
Sbjct: 1    MASLAQQFAGLICPPLSSSRLTERAATFSKPKRAANSVVTAKAVAISNVQTKERHKLKEL 60

Query: 287  FEEAYERCRTAPMEGVSFTVEDFTAALDKYDFDSEIGTKVKGTVFMTDNGGAVVDIIAKS 466
            FEEAYERCRTAP+EGVSFT+EDF AALD YD++SEIGT+VKGTVFMTDN GA VDI AKS
Sbjct: 61   FEEAYERCRTAPLEGVSFTLEDFHAALDTYDYNSEIGTRVKGTVFMTDNNGAFVDITAKS 120

Query: 467  SAYLPVQEACIHRIKHVSEAGIYPGLVEEFVIIGEKPSDDSLILSLRAIQYDLAWERCRQ 646
            SAYLPVQEA IH+IK V EAGI PG+ EEFVIIGE  +DDSLILSLR+IQY+LAWERCRQ
Sbjct: 121  SAYLPVQEASIHKIKRVEEAGIVPGMREEFVIIGENEADDSLILSLRSIQYELAWERCRQ 180

Query: 647  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-AEELIDKELPLKFVEVDEE 823
            L                                      + AEEL+DKE+PLKFV+VDEE
Sbjct: 181  LQAEDAIVKGKVVGGNRGGVVAVVEGLQGFVPFSQISSKSSAEELLDKEVPLKFVDVDEE 240

Query: 824  QSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD 1003
            QSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD
Sbjct: 241  QSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD 300

Query: 1004 ISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQTFRQR 1183
            ISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKA+EMA+TFRQR
Sbjct: 301  ISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMARTFRQR 360

Query: 1184 IAQAEAMARADMLRFQPEXXXXXXXXXXXXXXTPDLPAEGLDLSDI 1321
            IAQAEAMARADMLRFQPE                DLPAEGLDLSD+
Sbjct: 361  IAQAEAMARADMLRFQPESGLPLSSGGILGPNISDLPAEGLDLSDV 406