BLASTX nr result

ID: Dioscorea21_contig00002461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002461
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX92969.1| MADS box protein 5, partial [Agave tequilana]          145   4e-33
gb|ACV74250.1| EXTRAPETALS [Petunia x hybrida] gi|267850663|gb|A...   141   6e-32
pir||H84613 probable MADS-box protein [imported] - Arabidopsis t...   140   1e-31
dbj|BAE98676.1| short vegegative phase protein [Arabidopsis thal...   140   1e-31
ref|NP_179840.2| MADS-box protein SVP [Arabidopsis thaliana] gi|...   140   1e-31

>gb|AEX92969.1| MADS box protein 5, partial [Agave tequilana]
          Length = 229

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/134 (54%), Positives = 100/134 (74%)
 Frame = -1

Query: 404 GLFKKAQELAILCDADVGLIVFSASGKLFEYASLSMCEILHMHGTQLGNTLKRGNQTFDS 225
           GLFKKA+EL+ILCDA+VGLI+FSA+GKLFE++S S  EI+  H       L     + D 
Sbjct: 26  GLFKKAEELSILCDAEVGLIIFSATGKLFEFSSSSTKEIIERHSMHSKKILSPEQPSLDL 85

Query: 224 LTRNSRYADLKKEYDDKNRRLRQMRGEDLQGLTIEELTNLERTIDVGLTRVMERKGRRII 45
             +NS YA L K+  + +R+LR+MRGEDLQGLTIEEL NLE+T++ GL+RV+ RK  +I+
Sbjct: 86  NLQNSNYARLSKQVVETSRQLRKMRGEDLQGLTIEELQNLEKTLETGLSRVLGRKSEQIM 145

Query: 44  EQLSSLRQKEMQLL 3
           EQ++ L+QK +QL+
Sbjct: 146 EQINGLQQKGLQLM 159


>gb|ACV74250.1| EXTRAPETALS [Petunia x hybrida] gi|267850663|gb|ACY82403.1|
           MADS-box protein 20 [Petunia x hybrida]
          Length = 233

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/135 (53%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
 Frame = -1

Query: 404 GLFKKAQELAILCDADVGLIVFSASGKLFEYASLSMCEILHMHGTQLGNTLKRGNQTFD- 228
           GLFKKA+EL++LCDADV LI+FS++GKLFEY+S SM EIL        N  K    + + 
Sbjct: 27  GLFKKAEELSVLCDADVALIIFSSTGKLFEYSSSSMKEILERRDLHSKNLEKLDQPSLEL 86

Query: 227 SLTRNSRYADLKKEYDDKNRRLRQMRGEDLQGLTIEELTNLERTIDVGLTRVMERKGRRI 48
            L  NS Y+ L +E  +K+ RLRQMRGE+LQGL+IEEL  LERT++ GL RV+ERKG +I
Sbjct: 87  QLVENSNYSRLSREISEKSHRLRQMRGEELQGLSIEELQQLERTLEAGLGRVIERKGDKI 146

Query: 47  IEQLSSLRQKEMQLL 3
           + +++ L+QK ++L+
Sbjct: 147 MREINQLQQKGLELM 161


>pir||H84613 probable MADS-box protein [imported] - Arabidopsis thaliana
           gi|4544457|gb|AAD22365.1| putative MADS-box protein
           [Arabidopsis thaliana] gi|225898126|dbj|BAH30395.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 210

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/135 (53%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = -1

Query: 404 GLFKKAQELAILCDADVGLIVFSASGKLFEYASLSMCEILHMHGTQLGNTLKRGNQTFD- 228
           GLFKKA+EL++LCDADV LI+FS++GKLFE+ S SM E+L  H  Q  N  K    + + 
Sbjct: 27  GLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLEL 86

Query: 227 SLTRNSRYADLKKEYDDKNRRLRQMRGEDLQGLTIEELTNLERTIDVGLTRVMERKGRRI 48
            L  NS +A + KE  DK+ RLRQMRGE+LQGL IEEL  LE+ ++ GLTRV+E K  +I
Sbjct: 87  QLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKI 146

Query: 47  IEQLSSLRQKEMQLL 3
           + ++S L++K MQL+
Sbjct: 147 MSEISELQKKGMQLM 161


>dbj|BAE98676.1| short vegegative phase protein [Arabidopsis thaliana]
          Length = 240

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/135 (53%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = -1

Query: 404 GLFKKAQELAILCDADVGLIVFSASGKLFEYASLSMCEILHMHGTQLGNTLKRGNQTFD- 228
           GLFKKA+EL++LCDADV LI+FS++GKLFE+ S SM E+L  H  Q  N  K    + + 
Sbjct: 27  GLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLEL 86

Query: 227 SLTRNSRYADLKKEYDDKNRRLRQMRGEDLQGLTIEELTNLERTIDVGLTRVMERKGRRI 48
            L  NS +A + KE  DK+ RLRQMRGE+LQGL IEEL  LE+ ++ GLTRV+E K  +I
Sbjct: 87  QLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKI 146

Query: 47  IEQLSSLRQKEMQLL 3
           + ++S L++K MQL+
Sbjct: 147 MSEISELQKKGMQLM 161


>ref|NP_179840.2| MADS-box protein SVP [Arabidopsis thaliana]
           gi|17433186|sp|Q9FVC1.1|SVP_ARATH RecName: Full=MADS-box
           protein SVP; AltName: Full=Protein SHORT VEGETATIVE
           PHASE gi|10944320|gb|AAG24508.1|AF211171_1 short
           vegetative phase protein [Arabidopsis thaliana]
           gi|156778053|gb|ABU95408.1| short vegetative phase
           [Arabidopsis thaliana] gi|193083241|gb|ACF09414.1|
           At2g22540 [Arabidopsis thaliana]
           gi|330252226|gb|AEC07320.1| MADS-box protein SVP
           [Arabidopsis thaliana]
          Length = 240

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/135 (53%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = -1

Query: 404 GLFKKAQELAILCDADVGLIVFSASGKLFEYASLSMCEILHMHGTQLGNTLKRGNQTFD- 228
           GLFKKA+EL++LCDADV LI+FS++GKLFE+ S SM E+L  H  Q  N  K    + + 
Sbjct: 27  GLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLEL 86

Query: 227 SLTRNSRYADLKKEYDDKNRRLRQMRGEDLQGLTIEELTNLERTIDVGLTRVMERKGRRI 48
            L  NS +A + KE  DK+ RLRQMRGE+LQGL IEEL  LE+ ++ GLTRV+E K  +I
Sbjct: 87  QLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKI 146

Query: 47  IEQLSSLRQKEMQLL 3
           + ++S L++K MQL+
Sbjct: 147 MSEISELQKKGMQLM 161


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