BLASTX nr result

ID: Dioscorea21_contig00002451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002451
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282329.1| PREDICTED: sodium-coupled neutral amino acid...   128   6e-28
emb|CAN67024.1| hypothetical protein VITISV_036511 [Vitis vinifera]   128   6e-28
ref|XP_002329300.1| amino acid transporter [Populus trichocarpa]...   112   4e-23
ref|XP_003552624.1| PREDICTED: sodium-coupled neutral amino acid...   110   9e-23
ref|XP_002534057.1| amino acid transporter, putative [Ricinus co...   109   3e-22

>ref|XP_002282329.1| PREDICTED: sodium-coupled neutral amino acid transporter 4 [Vitis
           vinifera]
          Length = 462

 Score =  128 bits (321), Expect = 6e-28
 Identities = 67/92 (72%), Positives = 78/92 (84%)
 Frame = +1

Query: 190 MTIDSISHVEKKSSSKRRHIPDEKAPLLPTKREEEEDGGFSEFNGASFAGAVFNLSTTIV 369
           MTI+SI+ V++KS   +R + DEKAPLLP+K EEE  GGF EFNGASF GAVFNLSTTIV
Sbjct: 1   MTIESIAPVKEKSRKNKRVVVDEKAPLLPSKHEEE--GGFEEFNGASFTGAVFNLSTTIV 58

Query: 370 GAGIMSLPATMKLLGLVPGIVMIIFVAFLTEA 465
           GAGIM+LPATMK++GL  GI MIIF+AFLTEA
Sbjct: 59  GAGIMALPATMKVMGLGVGIAMIIFMAFLTEA 90


>emb|CAN67024.1| hypothetical protein VITISV_036511 [Vitis vinifera]
          Length = 437

 Score =  128 bits (321), Expect = 6e-28
 Identities = 67/92 (72%), Positives = 78/92 (84%)
 Frame = +1

Query: 190 MTIDSISHVEKKSSSKRRHIPDEKAPLLPTKREEEEDGGFSEFNGASFAGAVFNLSTTIV 369
           MTI+SI+ V++KS   +R + DEKAPLLP+K EEE  GGF EFNGASF GAVFNLSTTIV
Sbjct: 1   MTIESIAPVKEKSRKNKRVVVDEKAPLLPSKHEEE--GGFEEFNGASFTGAVFNLSTTIV 58

Query: 370 GAGIMSLPATMKLLGLVPGIVMIIFVAFLTEA 465
           GAGIM+LPATMK++GL  GI MIIF+AFLTEA
Sbjct: 59  GAGIMALPATMKVMGLGVGIAMIIFMAFLTEA 90


>ref|XP_002329300.1| amino acid transporter [Populus trichocarpa]
           gi|222870754|gb|EEF07885.1| amino acid transporter
           [Populus trichocarpa]
          Length = 460

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/92 (66%), Positives = 72/92 (78%)
 Frame = +1

Query: 190 MTIDSISHVEKKSSSKRRHIPDEKAPLLPTKREEEEDGGFSEFNGASFAGAVFNLSTTIV 369
           MTI +I   +K+  S+R    DE APLLP +   +ED GF EFNGASF GAVFNLSTTIV
Sbjct: 1   MTIGNIPP-KKERKSRRTKPVDENAPLLPKR---QEDAGFDEFNGASFTGAVFNLSTTIV 56

Query: 370 GAGIMSLPATMKLLGLVPGIVMIIFVAFLTEA 465
           GAGIM+LPATMK+LGL+ G+ MIIF+AFLTEA
Sbjct: 57  GAGIMALPATMKVLGLILGVAMIIFMAFLTEA 88


>ref|XP_003552624.1| PREDICTED: sodium-coupled neutral amino acid transporter 3-like
           [Glycine max]
          Length = 465

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/92 (58%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = +1

Query: 190 MTIDSIS-HVEKKSSSKRRHIPDEKAPLLPTKREEEEDGGFSEFNGASFAGAVFNLSTTI 366
           MTI S++   E+K S K + + +E APLLP    +E D GF +FNGASF+GAVFNLSTTI
Sbjct: 1   MTISSLAPKAERKKSRKSKAVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTI 60

Query: 367 VGAGIMSLPATMKLLGLVPGIVMIIFVAFLTE 462
           +GAGIM+LPAT+K LG++PG++ II +A LTE
Sbjct: 61  IGAGIMALPATLKQLGMIPGLLAIIIMALLTE 92


>ref|XP_002534057.1| amino acid transporter, putative [Ricinus communis]
           gi|223525920|gb|EEF28328.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 461

 Score =  109 bits (272), Expect = 3e-22
 Identities = 61/93 (65%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
 Frame = +1

Query: 190 MTIDSISHVEKKSSSKRRHIP-DEKAPLLPTKREEEEDGGFSEFNGASFAGAVFNLSTTI 366
           MTI+S  H  KK    R+  P +EKAPLLP  + +EE  GF EF+GASF GAVFNLSTTI
Sbjct: 1   MTIES--HAPKKERKSRKTKPVNEKAPLLP--KRQEEHAGFDEFDGASFTGAVFNLSTTI 56

Query: 367 VGAGIMSLPATMKLLGLVPGIVMIIFVAFLTEA 465
           VGAGIM+LPATMK+LGL  G+ +IIF+AFLTEA
Sbjct: 57  VGAGIMALPATMKVLGLGLGVALIIFMAFLTEA 89


Top