BLASTX nr result
ID: Dioscorea21_contig00002446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002446
(1885 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299802.1| predicted protein [Populus trichocarpa] gi|2... 367 e-102
emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera] 369 1e-99
ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containin... 368 3e-99
gb|EAY96403.1| hypothetical protein OsI_18300 [Oryza sativa Indi... 365 2e-98
sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 365 2e-98
>ref|XP_002299802.1| predicted protein [Populus trichocarpa] gi|222847060|gb|EEE84607.1|
predicted protein [Populus trichocarpa]
Length = 726
Score = 367 bits (943), Expect(2) = e-102
Identities = 204/407 (50%), Positives = 241/407 (59%), Gaps = 45/407 (11%)
Frame = -1
Query: 1885 EFRMYSFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKGSCRNGDA 1706
EFRMY+FK+KPCSRAYSHDWTECPFVHPGENARRRDPRKY YSCVPCPEFRKGSCR GDA
Sbjct: 256 EFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDA 315
Query: 1705 CEYAHGVFECWLHPAQYRTRLCKDETGCNRRVCFFAHKTEELRSV---------NPXXXX 1553
CEYAHG+FECWLHPAQYRTRLCKDETGC RRVCFFAHK EELR + +P
Sbjct: 316 CEYAHGIFECWLHPAQYRTRLCKDETGCTRRVCFFAHKPEELRPLYASTGSAVPSPRSYS 375
Query: 1552 XXXXXXXXXXSATSSLGVSSLDMATAMMLMQPXXXXXXXXXXXXAWLNQSGGGAVTPTLQ 1373
+ SLG SS+ M + P W NQS V P LQ
Sbjct: 376 ANGSIFDMSSISPLSLGSSSVLMPST---STPPMTPSGSSSPMGGWTNQS--NVVPPALQ 430
Query: 1372 LPSSRLKSTLSARDIQXXXXXXXXDGYQHK--VMDELSVASPRTSWST------------ 1235
LP SRLK+ ARD+ + ++ + +MDE+S S +SW+
Sbjct: 431 LPGSRLKAAFCARDMDLDMELLGLESHRRRQQLMDEISGLSSPSSWNNGLSTASAFTASG 490
Query: 1234 ------NTLAASRPSDYSDLYGSLDPSLLTQLQGLSMKQASGTQFQSP------------ 1109
N L RP++ D++GSLDPS+L QLQGLS+ S T QSP
Sbjct: 491 DRTGELNRLGGVRPTNLEDMFGSLDPSILPQLQGLSL-DGSTTHLQSPTGLQMRQNINQQ 549
Query: 1108 --YSGKLXXXXXXXXXXXXSGLDHS--LATAIMNSRASAFAKRSQSFIDRGAVARQSTLA 941
S G+DHS A A+++SR++AFAKRSQSF++R AV R +
Sbjct: 550 LRSSYPTSFSSSPVRTSPSFGMDHSGGAAAAVLSSRSAAFAKRSQSFVERNAVNRHPVFS 609
Query: 940 PTSTAVAPAMGFSDWGSPSGKLDWGVHGEELNKLRKSASFGIRSNGS 800
+ + P SDWGSP GKLDWG+ GEELNKLRKSASFG RS+GS
Sbjct: 610 SPAKVMPP--NLSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSDGS 654
Score = 31.6 bits (70), Expect(2) = e-102
Identities = 23/43 (53%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
Frame = -3
Query: 686 GSLSLEQQQKLY-GLNGGGEFHASEMLPAWAE------EPMVA 579
G L LEQQQ+ LN GG SEMLPAW E EP+VA
Sbjct: 688 GPLGLEQQQQQQCHLNIGG----SEMLPAWVEQLYIEQEPLVA 726
>emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera]
Length = 893
Score = 369 bits (948), Expect = 1e-99
Identities = 209/416 (50%), Positives = 248/416 (59%), Gaps = 54/416 (12%)
Frame = -1
Query: 1885 EFRMYSFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKGSCRNGDA 1706
EFRMY+FK+KPCSRAYSHDWTECPFVHPGENARRRDPRKY YSCVPCPEFRKGSCR GDA
Sbjct: 418 EFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDA 477
Query: 1705 CEYAHGVFECWLHPAQYRTRLCKDETGCNRRVCFFAHKTEELRSVNPXXXXXXXXXXXXX 1526
CEYAHG+FECWLHPAQYRTRLCKDETGC RRVCFFAHK EELR +
Sbjct: 478 CEYAHGIFECWLHPAQYRTRLCKDETGCTRRVCFFAHKPEELRPL------YASTGSAVP 531
Query: 1525 XSATSSLGVSSLDMA--------TAMMLMQP------XXXXXXXXXXXXAWLNQSGGGAV 1388
+ S+G SSLDM+ ++ +LM P W NQ +
Sbjct: 532 SPRSFSVGASSLDMSPISPLALGSSSVLMPPTSTPPMTPSGVSSPMGGTMWQNQP--NII 589
Query: 1387 TPTLQLPSSRLKSTLSARDIQXXXXXXXXDGY---QHKVMDELSVASPRTSWST------ 1235
P LQL SRLKS+LSARD+ + + Q ++MDE++ S +SW++
Sbjct: 590 PPNLQLSGSRLKSSLSARDMDLDVELLGLESHRRRQQQLMDEMAGLSSPSSWNSGLNTSA 649
Query: 1234 -------------NTLAASRPSDYSDLYGSLDPSLLTQLQGLSMKQASGTQFQSP----- 1109
N L +P++ D++GSLDP++L QLQGLSM A+ Q QSP
Sbjct: 650 AFAASSGDLIGELNRLGGMKPTNLEDIFGSLDPTILPQLQGLSM-DAAAPQLQSPTGIQM 708
Query: 1108 -----------YSGKLXXXXXXXXXXXXSGLDHSLATAIMNSRASAFAKRSQSFIDRGAV 962
Y L S A++NSRA+AFAKRSQSFI+R A
Sbjct: 709 RQNINQQLRSSYPASLSSSPVRGSASFGMDPSGSATAAVLNSRAAAFAKRSQSFIERSAA 768
Query: 961 ARQS--TLAPTSTAVAPAMGFSDWGSPSGKLDWGVHGEELNKLRKSASFGIRSNGS 800
R S + + +S AV P+ SDWGSP GKLDWG+ GEELNKLRKSASFG RSNGS
Sbjct: 769 NRHSGFSSSASSAAVVPS-PLSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSNGS 823
>ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containing protein 66-like isoform
1 [Vitis vinifera]
Length = 693
Score = 368 bits (944), Expect = 3e-99
Identities = 209/414 (50%), Positives = 246/414 (59%), Gaps = 52/414 (12%)
Frame = -1
Query: 1885 EFRMYSFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRKGSCRNGDA 1706
EFRMY+FK+KPCSRAYSHDWTECPFVHPGENARRRDPRKY YSCVPCPEFRKGSCR GDA
Sbjct: 220 EFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDA 279
Query: 1705 CEYAHGVFECWLHPAQYRTRLCKDETGCNRRVCFFAHKTEELRSVNPXXXXXXXXXXXXX 1526
CEYAHG+FECWLHPAQYRTRLCKDETGC RRVCFFAHK EELR +
Sbjct: 280 CEYAHGIFECWLHPAQYRTRLCKDETGCTRRVCFFAHKPEELRPL------YASTGSAVP 333
Query: 1525 XSATSSLGVSSLDMA--------TAMMLMQP------XXXXXXXXXXXXAWLNQSGGGAV 1388
+ S+G SSLDM+ ++ +LM P W NQ +
Sbjct: 334 SPRSFSVGASSLDMSPISPLALGSSSVLMPPTSTPPMTPSGVSSPMGGTMWQNQP--NII 391
Query: 1387 TPTLQLPSSRLKSTLSARDIQ-XXXXXXXXDGYQHKVMDELSVASPRTSWST-------- 1235
P LQL SRLKS+LSARD+ Q ++MDE++ S +SW++
Sbjct: 392 PPNLQLSGSRLKSSLSARDMDLDVLGLESHRRRQQQLMDEMAGLSSPSSWNSGLNTSAAF 451
Query: 1234 -----------NTLAASRPSDYSDLYGSLDPSLLTQLQGLSMKQASGTQFQSP------- 1109
N L +P++ D++GSLDP++L QLQGLSM A+ Q QSP
Sbjct: 452 AASSGDLIGELNRLGGMKPTNLEDIFGSLDPTILPQLQGLSM-DAAAPQLQSPTGIQMRQ 510
Query: 1108 ---------YSGKLXXXXXXXXXXXXSGLDHSLATAIMNSRASAFAKRSQSFIDRGAVAR 956
Y L S A++NSRA+AFAKRSQSFI+R A R
Sbjct: 511 NINQQLRSSYPASLSSSPVRGSASFGMDPSGSATAAVLNSRAAAFAKRSQSFIERSAANR 570
Query: 955 QS--TLAPTSTAVAPAMGFSDWGSPSGKLDWGVHGEELNKLRKSASFGIRSNGS 800
S + + +S AV P+ SDWGSP GKLDWG+ GEELNKLRKSASFG RSNGS
Sbjct: 571 HSGFSSSASSAAVVPS-PLSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSNGS 623
>gb|EAY96403.1| hypothetical protein OsI_18300 [Oryza sativa Indica Group]
Length = 579
Score = 365 bits (938), Expect = 2e-98
Identities = 206/382 (53%), Positives = 243/382 (63%), Gaps = 20/382 (5%)
Frame = -1
Query: 1885 EFRMYSFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRK-GSCRNGD 1709
EFRMYSFK+KPCSRAYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRK GSCR GD
Sbjct: 190 EFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGD 249
Query: 1708 ACEYAHGVFECWLHPAQYRTRLCKDETGCNRRVCFFAHKTEELRSVNPXXXXXXXXXXXX 1529
ACEYAHGVFECWLHPAQYRTRLCKDE GC RR+CFFAHK +ELR+VNP
Sbjct: 250 ACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDELRAVNPSAVSVGMQPTVS 309
Query: 1528 XXSATSSLGVSSLDMATAMMLMQPXXXXXXXXXXXXAWLNQSGGGAVTPTLQLPSSRLKS 1349
++ G+ A AMM AW + P+SRLK+
Sbjct: 310 SPRSSPPNGLDMAAAAAAMM--------------SPAWPSS------------PASRLKT 343
Query: 1348 TLSARDIQXXXXXXXXDGYQHKVMDELSVA-SPRTSW--STNTLAASRPS----DYSDLY 1190
L AR++ D YQ K+ D++S A SPR SW + N LA + P+ DY+DL
Sbjct: 344 ALGARELDFDLEMLALDQYQQKLFDKVSGAPSPRASWGAAANGLATASPARAVPDYTDLL 403
Query: 1189 GSLDPSLLTQLQGLSMKQASG----------TQFQSPYSGKLXXXXXXXXXXXXSGLDHS 1040
GS+DP++L+QL LS+KQA TQ P S + GLDHS
Sbjct: 404 GSVDPAMLSQLHALSLKQAGDMPAYSSMADTTQMHMPTSPMV------GGANTAFGLDHS 457
Query: 1039 LATAIMNSRASAFAKRSQSFIDRG--AVARQSTLAPTSTAVAPAMGFSDWGSPSGKLDWG 866
+A AIM+SRASAFAKRSQSFIDRG A A +S ++P +T AP++ SDWGSP GKLDWG
Sbjct: 458 MAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTG-APSI-LSDWGSPDGKLDWG 515
Query: 865 VHGEELNKLRKSASFGIRSNGS 800
V G+EL+KLRKSASF R +
Sbjct: 516 VQGDELHKLRKSASFAFRGQSA 537
>sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 33;
Short=OsC3H33 gi|51854363|gb|AAU10743.1| putative finger
transcription factor [Oryza sativa Japonica Group]
gi|215740698|dbj|BAG97354.1| unnamed protein product
[Oryza sativa Japonica Group] gi|217030947|gb|ACJ74074.1|
zinc finger protein [Oryza sativa Japonica Group]
gi|222630067|gb|EEE62199.1| hypothetical protein
OsJ_16986 [Oryza sativa Japonica Group]
Length = 601
Score = 365 bits (938), Expect = 2e-98
Identities = 206/382 (53%), Positives = 243/382 (63%), Gaps = 20/382 (5%)
Frame = -1
Query: 1885 EFRMYSFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYLYSCVPCPEFRK-GSCRNGD 1709
EFRMYSFK+KPCSRAYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRK GSCR GD
Sbjct: 212 EFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGD 271
Query: 1708 ACEYAHGVFECWLHPAQYRTRLCKDETGCNRRVCFFAHKTEELRSVNPXXXXXXXXXXXX 1529
ACEYAHGVFECWLHPAQYRTRLCKDE GC RR+CFFAHK +ELR+VNP
Sbjct: 272 ACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDELRAVNPSAVSVGMQPTVS 331
Query: 1528 XXSATSSLGVSSLDMATAMMLMQPXXXXXXXXXXXXAWLNQSGGGAVTPTLQLPSSRLKS 1349
++ G+ A AMM AW + P+SRLK+
Sbjct: 332 SPRSSPPNGLDMAAAAAAMM--------------SPAWPSS------------PASRLKT 365
Query: 1348 TLSARDIQXXXXXXXXDGYQHKVMDELSVA-SPRTSW--STNTLAASRPS----DYSDLY 1190
L AR++ D YQ K+ D++S A SPR SW + N LA + P+ DY+DL
Sbjct: 366 ALGARELDFDLEMLALDQYQQKLFDKVSGAPSPRASWGAAANGLATASPARAVPDYTDLL 425
Query: 1189 GSLDPSLLTQLQGLSMKQASG----------TQFQSPYSGKLXXXXXXXXXXXXSGLDHS 1040
GS+DP++L+QL LS+KQA TQ P S + GLDHS
Sbjct: 426 GSVDPAMLSQLHALSLKQAGDMPAYSSMADTTQMHMPTSPMV------GGANTAFGLDHS 479
Query: 1039 LATAIMNSRASAFAKRSQSFIDRG--AVARQSTLAPTSTAVAPAMGFSDWGSPSGKLDWG 866
+A AIM+SRASAFAKRSQSFIDRG A A +S ++P +T AP++ SDWGSP GKLDWG
Sbjct: 480 MAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTG-APSI-LSDWGSPDGKLDWG 537
Query: 865 VHGEELNKLRKSASFGIRSNGS 800
V G+EL+KLRKSASF R +
Sbjct: 538 VQGDELHKLRKSASFAFRGQSA 559