BLASTX nr result

ID: Dioscorea21_contig00002434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002434
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138174.1| PREDICTED: uncharacterized endoplasmic retic...    78   7e-13
ref|XP_002522464.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_002316127.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
gb|ABK94463.1| unknown [Populus trichocarpa]                           76   2e-12
ref|XP_004168446.1| PREDICTED: uncharacterized endoplasmic retic...    73   2e-11

>ref|XP_004138174.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Cucumis sativus]
           gi|449477233|ref|XP_004154967.1| PREDICTED:
           uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Cucumis sativus]
          Length = 198

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/68 (55%), Positives = 43/68 (63%)
 Frame = -1

Query: 206 GLFDLENNFAFYGAYHSNPTNVLIHMLFVWPIFYTSXXXXXXXXXXLHVPFGFGGGDVLL 27
           GLFDLE  FAFYGAYHSNP N+ IH+LFVWPIF+TS            +P    G D  L
Sbjct: 5   GLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKSPCGFDHGL 64

Query: 26  PLNFAFVF 3
            LNF F+F
Sbjct: 65  VLNFGFLF 72


>ref|XP_002522464.1| conserved hypothetical protein [Ricinus communis]
           gi|223538349|gb|EEF39956.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -1

Query: 206 GLFDLENNFAFYGAYHSNPTNVLIHMLFVWPIFYTSXXXXXXXXXXLHVPFG-FGGGDVL 30
           G FDLE +FAFYGAYHSNP NVLIHM+FVWPIF+T+           ++       GD++
Sbjct: 5   GFFDLEKHFAFYGAYHSNPVNVLIHMIFVWPIFFTALLILYFTPSVFNLKMSLLCHGDIV 64

Query: 29  LPLNFAFVF 3
           L  NF F+F
Sbjct: 65  LLFNFGFLF 73


>ref|XP_002316127.1| predicted protein [Populus trichocarpa] gi|222865167|gb|EEF02298.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
 Frame = -1

Query: 206 GLFDLENNFAFYGAYHSNPTNVLIHMLFVWPIFYTSXXXXXXXXXXLHVP----FGFGGG 39
           GLFDLE ++AFYGAYHSNP N+LIHM+FVWPIF+ S           ++P      FG  
Sbjct: 1   GLFDLEKHYAFYGAYHSNPINILIHMIFVWPIFFASSLILYFTPPLFNLPQVELSLFGSN 60

Query: 38  DVLLPLNFAF 9
           DV+L LN  F
Sbjct: 61  DVVLFLNIGF 70


>gb|ABK94463.1| unknown [Populus trichocarpa]
          Length = 203

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
 Frame = -1

Query: 206 GLFDLENNFAFYGAYHSNPTNVLIHMLFVWPIFYTSXXXXXXXXXXLHVP----FGFGGG 39
           GLFDLE ++AFYGAYHSNP N+LIHM+FVWPIF+ S           ++P      FG  
Sbjct: 5   GLFDLEKHYAFYGAYHSNPINILIHMIFVWPIFFASSLILYFTPPLFNLPQVELSLFGSN 64

Query: 38  DVLLPLNFAF 9
           DV+L LN  F
Sbjct: 65  DVVLFLNIGF 74


>ref|XP_004168446.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Cucumis sativus]
          Length = 199

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/69 (50%), Positives = 42/69 (60%)
 Frame = -1

Query: 209 KGLFDLENNFAFYGAYHSNPTNVLIHMLFVWPIFYTSXXXXXXXXXXLHVPFGFGGGDVL 30
           +G FDLE +FAFYGAYHSNP N+ IH+LFVWPIF+T              P    G +  
Sbjct: 4   RGFFDLERHFAFYGAYHSNPINIFIHILFVWPIFFTGLMLFYYTPSFYSFPKCPCGFNTG 63

Query: 29  LPLNFAFVF 3
           L LNF F+F
Sbjct: 64  LVLNFGFLF 72


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