BLASTX nr result

ID: Dioscorea21_contig00002402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002402
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26931.3| unnamed protein product [Vitis vinifera]              263   6e-68
ref|NP_001041874.1| Os01g0121200 [Oryza sativa Japonica Group] g...   253   4e-65
ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258...   249   9e-64
dbj|BAD52455.1| unknown protein [Oryza sativa Japonica Group]         248   1e-63
ref|NP_001132646.1| protein binding protein [Zea mays] gi|194694...   248   2e-63

>emb|CBI26931.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  263 bits (671), Expect = 6e-68
 Identities = 128/219 (58%), Positives = 152/219 (69%)
 Frame = -3

Query: 943 GFSTGKLVECRICQDEDEDSNMESPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICLQQFK 764
           G S  KLVECRICQDEDEDSNME+PCSCCGSLKYAHR CVQRWCNEKG+T+CEIC QQFK
Sbjct: 63  GSSPRKLVECRICQDEDEDSNMETPCSCCGSLKYAHRSCVQRWCNEKGNTMCEICQQQFK 122

Query: 763 PGYTAPPQLFHYGGIPMNFRGNWEVSRRDINNHRFITMVPTAHXXXXXXXXXXXXXSTRN 584
           PGYTAPP LF + GIP+N RGNWE+SR ++NN RFI MV T               ++R+
Sbjct: 123 PGYTAPPPLFQFRGIPINLRGNWEISRGELNNPRFIAMVSTDRNFLDPDYNEFTTSTSRS 182

Query: 583 MMYCRTVAIVFMVLLVLRHTLPIILTGVEQYSXXXXXXXXXXTAGIVLPLYVMLKAVTTF 404
           MM CR+VAI+FMVLL+LRHTLP+++ G E+Y+          TAGI+LP+Y+ML+AVT  
Sbjct: 183 MMCCRSVAIIFMVLLILRHTLPVMINGAEEYTFPLFMLVLLRTAGIILPIYIMLRAVTAI 242

Query: 403 HRRRIQQAAQEPAIPTSNEATTRAQTSQTMPTEMHMIHV 287
            RR  QQ    P   T  E    A   QT     H+IHV
Sbjct: 243 QRRPRQQDPPTPYASTDEETEQPALQPQT-----HIIHV 276


>ref|NP_001041874.1| Os01g0121200 [Oryza sativa Japonica Group]
           gi|113531405|dbj|BAF03788.1| Os01g0121200 [Oryza sativa
           Japonica Group] gi|218187416|gb|EEC69843.1| hypothetical
           protein OsI_00172 [Oryza sativa Indica Group]
           gi|222617649|gb|EEE53781.1| hypothetical protein
           OsJ_00178 [Oryza sativa Japonica Group]
          Length = 269

 Score =  253 bits (647), Expect = 4e-65
 Identities = 122/218 (55%), Positives = 158/218 (72%), Gaps = 1/218 (0%)
 Frame = -3

Query: 955 NGD-EGFSTGKLVECRICQDEDEDSNMESPCSCCGSLKYAHRKCVQRWCNEKGDTVCEIC 779
           +GD +G S  K+VECRICQ+ED D++ME+PC+CCGSLKYAHRKC+QRWCNEKGDTVCEIC
Sbjct: 41  DGDGDGGSARKMVECRICQEEDWDTSMEAPCACCGSLKYAHRKCIQRWCNEKGDTVCEIC 100

Query: 778 LQQFKPGYTAPPQLFHYGGIPMNFRGNWEVSRRDINNHRFITMVPTAHXXXXXXXXXXXX 599
           LQQFKPGYTAP QLFHYG IPMNFRGNWE++R+D+++ + ITMVP+              
Sbjct: 101 LQQFKPGYTAPQQLFHYGSIPMNFRGNWEIARQDLHDSQIITMVPSERDFMDGYEDYLPI 160

Query: 598 XSTRNMMYCRTVAIVFMVLLVLRHTLPIILTGVEQYSXXXXXXXXXXTAGIVLPLYVMLK 419
            +  + + CRTVAI+FM LLVLRHTLP+++ G  +YS          TAGI+ P+ VM++
Sbjct: 161 RTRSSTLCCRTVAIIFMSLLVLRHTLPLMIGGDGEYSLALFSLLVLRTAGILFPILVMVR 220

Query: 418 AVTTFHRRRIQQAAQEPAIPTSNEATTRAQTSQTMPTE 305
           A+ TFHRRR QQ  +E  + TS+++      S T P +
Sbjct: 221 ALATFHRRRRQQERREMYM-TSSDSEEEEDYSDTDPAQ 257


>ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258737 [Vitis vinifera]
           gi|296087202|emb|CBI33576.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  249 bits (635), Expect = 9e-64
 Identities = 121/201 (60%), Positives = 141/201 (70%)
 Frame = -3

Query: 949 DEGFSTGKLVECRICQDEDEDSNMESPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICLQQ 770
           D G S   LV+CRIC DEDEDSNME PCSC GSLKYAHR CVQRWCNEKG+T CEIC QQ
Sbjct: 51  DIGPSQRILVQCRICHDEDEDSNMEVPCSCAGSLKYAHRGCVQRWCNEKGNTTCEICHQQ 110

Query: 769 FKPGYTAPPQLFHYGGIPMNFRGNWEVSRRDINNHRFITMVPTAHXXXXXXXXXXXXXST 590
           F+P YTAPP LFHYGGIPMNFRGNWEVSRRD N+ RFI MV +               ++
Sbjct: 111 FRPNYTAPPPLFHYGGIPMNFRGNWEVSRRDANHPRFIAMVASDRNFLDTDIDEYPAPNS 170

Query: 589 RNMMYCRTVAIVFMVLLVLRHTLPIILTGVEQYSXXXXXXXXXXTAGIVLPLYVMLKAVT 410
           R+++ CR VAI+FM+LLVLRHTLPII++G  +YS            GI+LP+Y+M+KA T
Sbjct: 171 RSVICCRIVAIIFMILLVLRHTLPIIISGAGEYSFTLFTLLMLRAIGILLPVYIMVKACT 230

Query: 409 TFHRRRIQQAAQEPAIPTSNE 347
            F RRR QQ A+       NE
Sbjct: 231 AFQRRRHQQDARNLPSDEENE 251


>dbj|BAD52455.1| unknown protein [Oryza sativa Japonica Group]
          Length = 218

 Score =  248 bits (634), Expect = 1e-63
 Identities = 117/207 (56%), Positives = 151/207 (72%)
 Frame = -3

Query: 925 LVECRICQDEDEDSNMESPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICLQQFKPGYTAP 746
           +VECRICQ+ED D++ME+PC+CCGSLKYAHRKC+QRWCNEKGDTVCEICLQQFKPGYTAP
Sbjct: 1   MVECRICQEEDWDTSMEAPCACCGSLKYAHRKCIQRWCNEKGDTVCEICLQQFKPGYTAP 60

Query: 745 PQLFHYGGIPMNFRGNWEVSRRDINNHRFITMVPTAHXXXXXXXXXXXXXSTRNMMYCRT 566
            QLFHYG IPMNFRGNWE++R+D+++ + ITMVP+               +  + + CRT
Sbjct: 61  QQLFHYGSIPMNFRGNWEIARQDLHDSQIITMVPSERDFMDGYEDYLPIRTRSSTLCCRT 120

Query: 565 VAIVFMVLLVLRHTLPIILTGVEQYSXXXXXXXXXXTAGIVLPLYVMLKAVTTFHRRRIQ 386
           VAI+FM LLVLRHTLP+++ G  +YS          TAGI+ P+ VM++A+ TFHRRR Q
Sbjct: 121 VAIIFMSLLVLRHTLPLMIGGDGEYSLALFSLLVLRTAGILFPILVMVRALATFHRRRRQ 180

Query: 385 QAAQEPAIPTSNEATTRAQTSQTMPTE 305
           Q  +E  + TS+++      S T P +
Sbjct: 181 QERREMYM-TSSDSEEEEDYSDTDPAQ 206


>ref|NP_001132646.1| protein binding protein [Zea mays] gi|194694986|gb|ACF81577.1|
           unknown [Zea mays] gi|195645080|gb|ACG42008.1| protein
           binding protein [Zea mays] gi|413947241|gb|AFW79890.1|
           protein binding protein [Zea mays]
          Length = 271

 Score =  248 bits (632), Expect = 2e-63
 Identities = 119/225 (52%), Positives = 157/225 (69%), Gaps = 5/225 (2%)
 Frame = -3

Query: 943 GFSTGKLVECRICQDEDEDSNMESPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICLQQFK 764
           G S  K+VECRICQ+ED D+ ME+PC+CCGSLKYAHRKC+QRWCNEKGDT+CEICLQQF+
Sbjct: 47  GGSATKVVECRICQEEDWDTCMEAPCACCGSLKYAHRKCIQRWCNEKGDTMCEICLQQFR 106

Query: 763 PGYTAPPQLFHYGGIPMNFRGNWEVSRRDINNHRFITMVPTAHXXXXXXXXXXXXXSTRN 584
           PGYT+P QLFHYG IPMNFRGNWE++R+D+N+ + ITM+PT               +  +
Sbjct: 107 PGYTSPQQLFHYGSIPMNFRGNWEIARQDLNDSQIITMMPTERDFMDNYDDYFPIRTRSS 166

Query: 583 MMYCRTVAIVFMVLLVLRHTLPIILTGVEQYSXXXXXXXXXXTAGIVLPLYVMLKAVTTF 404
            + CRT+AI+FM LLVLRHTLP+++    +YS          TAGI+ P+ VM++A+ +F
Sbjct: 167 TLCCRTIAIIFMSLLVLRHTLPLVIGDNGEYSLALFSLLVLRTAGILFPILVMVRALASF 226

Query: 403 HRRRIQQAAQEPAIPTS-----NEATTRAQTSQTMPTEMHMIHVH 284
           H RR QQ +QE  I +S      E  T A ++QT  ++   I V+
Sbjct: 227 HHRRRQQESQEAYISSSESEEEEEEYTVANSAQTNYSQPRFIPVY 271


Top