BLASTX nr result

ID: Dioscorea21_contig00002392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002392
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317354.1| predicted protein [Populus trichocarpa] gi|1...   126   2e-27
gb|ABK20987.1| unknown [Picea sitchensis]                             125   5e-27
ref|NP_001234110.1| V-type proton ATPase subunit e-like precurso...   124   6e-27
gb|ABZ88805.1| ATP synthase subunit H protein [Hevea brasiliensis]    124   8e-27
ref|XP_002300343.1| predicted protein [Populus trichocarpa] gi|1...   123   2e-26

>ref|XP_002317354.1| predicted protein [Populus trichocarpa] gi|118481681|gb|ABK92781.1|
           unknown [Populus trichocarpa]
           gi|222860419|gb|EEE97966.1| predicted protein [Populus
           trichocarpa]
          Length = 70

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/70 (82%), Positives = 65/70 (92%)
 Frame = -2

Query: 390 MGFLVITLIFVLTGVLASILVRLCFNRGPSTNLLHLTLVITATVCCWLMWAIVYLAQMKP 211
           MGFLV TLIFV+ G++AS+  R+C NRGPSTNLLHLTLV+TATVCCW+MWAIVYLAQMKP
Sbjct: 1   MGFLVTTLIFVVVGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKP 60

Query: 210 LIVPILSEGE 181
           LIVPILSEGE
Sbjct: 61  LIVPILSEGE 70


>gb|ABK20987.1| unknown [Picea sitchensis]
          Length = 70

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/70 (78%), Positives = 66/70 (94%)
 Frame = -2

Query: 390 MGFLVITLIFVLTGVLASILVRLCFNRGPSTNLLHLTLVITATVCCWLMWAIVYLAQMKP 211
           MGFLV TLIF+L+G+LAS+LVRLC+N+GPS NLLH TLV TATVCCW+MWAIVYLAQ+KP
Sbjct: 1   MGFLVTTLIFILSGILASLLVRLCYNKGPSANLLHFTLVTTATVCCWMMWAIVYLAQLKP 60

Query: 210 LIVPILSEGE 181
           L+VPIL+EG+
Sbjct: 61  LVVPILNEGD 70


>ref|NP_001234110.1| V-type proton ATPase subunit e-like precursor [Solanum
           lycopersicum] gi|62751089|dbj|BAD95792.1| similar to ATP
           synthase subunit H protein [Solanum lycopersicum]
          Length = 70

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = -2

Query: 390 MGFLVITLIFVLTGVLASILVRLCFNRGPSTNLLHLTLVITATVCCWLMWAIVYLAQMKP 211
           MGFLV TLIFV  GV+AS+  R+C NRGPSTNLLHLTL+ITATVCCW+MWAIVYLAQ+KP
Sbjct: 1   MGFLVTTLIFVAIGVIASLCARICCNRGPSTNLLHLTLIITATVCCWMMWAIVYLAQLKP 60

Query: 210 LIVPILSEGE 181
           LIVP+LSEGE
Sbjct: 61  LIVPVLSEGE 70


>gb|ABZ88805.1| ATP synthase subunit H protein [Hevea brasiliensis]
          Length = 70

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = -2

Query: 390 MGFLVITLIFVLTGVLASILVRLCFNRGPSTNLLHLTLVITATVCCWLMWAIVYLAQMKP 211
           MGFLVITLIFV+ G++AS+  R+C NRGPS NL HLTLVITATVCCW+MWAIVYLAQMKP
Sbjct: 1   MGFLVITLIFVVIGIIASLCTRICCNRGPSANLFHLTLVITATVCCWMMWAIVYLAQMKP 60

Query: 210 LIVPILSEGE 181
           LIVPIL+EGE
Sbjct: 61  LIVPILNEGE 70


>ref|XP_002300343.1| predicted protein [Populus trichocarpa] gi|118482559|gb|ABK93200.1|
           unknown [Populus trichocarpa]
           gi|118489389|gb|ABK96499.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222847601|gb|EEE85148.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/70 (80%), Positives = 63/70 (90%)
 Frame = -2

Query: 390 MGFLVITLIFVLTGVLASILVRLCFNRGPSTNLLHLTLVITATVCCWLMWAIVYLAQMKP 211
           MGF V TLIF + G++AS+  R+C NRGPSTNLLHLTLV+TATVCCW+MWAIVYLAQMKP
Sbjct: 1   MGFFVTTLIFAVIGIIASLCTRICCNRGPSTNLLHLTLVLTATVCCWMMWAIVYLAQMKP 60

Query: 210 LIVPILSEGE 181
           LIVPILSEGE
Sbjct: 61  LIVPILSEGE 70


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