BLASTX nr result

ID: Dioscorea21_contig00002390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002390
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452186.1| hypothetical protein SORBIDRAFT_04g021330 [S...    63   2e-08
gb|ACR38361.1| unknown [Zea mays] gi|413937064|gb|AFW71615.1| pu...    63   3e-08
ref|NP_001131581.1| uncharacterized protein LOC100192925 [Zea ma...    63   3e-08
ref|XP_002274721.1| PREDICTED: uncharacterized protein LOC100267...    62   5e-08
emb|CAN81495.1| hypothetical protein VITISV_031969 [Vitis vinifera]    62   5e-08

>ref|XP_002452186.1| hypothetical protein SORBIDRAFT_04g021330 [Sorghum bicolor]
           gi|241932017|gb|EES05162.1| hypothetical protein
           SORBIDRAFT_04g021330 [Sorghum bicolor]
          Length = 421

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/57 (49%), Positives = 42/57 (73%)
 Frame = -3

Query: 178 STSDQDLFSHLYQHTLDIDTLIHFQNERLRLFVEELQRRHYRAVLIAVEQEVARRLK 8
           S S   + +HLY+H++++D L+  +NERLR  +EE +RRH RAV+ AVE+  ARRL+
Sbjct: 205 SQSQHGILAHLYRHSVEVDALVRIENERLRAGLEEARRRHVRAVVSAVERGAARRLR 261


>gb|ACR38361.1| unknown [Zea mays] gi|413937064|gb|AFW71615.1| putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 312

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -3

Query: 187 PTTSTSDQDLFSHLYQHTLDIDTLIHFQNERLRLFVEELQRRHYRAVLIAVEQEVARRLK 8
           P+ +   Q L SHLY+H ++ID L+  + ERLR  ++E +RRH+R V++A E+  ARRL+
Sbjct: 106 PSVAPVSQGLLSHLYRHGVEIDALVRIEKERLRAGLQEARRRHFRTVVLAAERAAARRLR 165


>ref|NP_001131581.1| uncharacterized protein LOC100192925 [Zea mays]
           gi|194691922|gb|ACF80045.1| unknown [Zea mays]
           gi|413937065|gb|AFW71616.1| putative RING zinc finger
           domain superfamily protein [Zea mays]
          Length = 328

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -3

Query: 187 PTTSTSDQDLFSHLYQHTLDIDTLIHFQNERLRLFVEELQRRHYRAVLIAVEQEVARRLK 8
           P+ +   Q L SHLY+H ++ID L+  + ERLR  ++E +RRH+R V++A E+  ARRL+
Sbjct: 122 PSVAPVSQGLLSHLYRHGVEIDALVRIEKERLRAGLQEARRRHFRTVVLAAERAAARRLR 181


>ref|XP_002274721.1| PREDICTED: uncharacterized protein LOC100267666 [Vitis vinifera]
          Length = 347

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/59 (47%), Positives = 43/59 (72%)
 Frame = -3

Query: 178 STSDQDLFSHLYQHTLDIDTLIHFQNERLRLFVEELQRRHYRAVLIAVEQEVARRLKEK 2
           S+  Q L+S+L  H LD+DT I  QN++LRL VEE +++H R++L  +EQ+  +RL+EK
Sbjct: 142 SSIPQQLYSYLCTHNLDLDTFIRHQNQKLRLIVEETRKKHCRSLLSIIEQQSLKRLEEK 200


>emb|CAN81495.1| hypothetical protein VITISV_031969 [Vitis vinifera]
          Length = 553

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/59 (47%), Positives = 43/59 (72%)
 Frame = -3

Query: 178 STSDQDLFSHLYQHTLDIDTLIHFQNERLRLFVEELQRRHYRAVLIAVEQEVARRLKEK 2
           S+  Q L+S+L  H LD+DT I  QN++LRL VEE +++H R++L  +EQ+  +RL+EK
Sbjct: 142 SSIPQQLYSYLCTHNLDLDTFIRHQNQKLRLIVEETRKKHCRSLLSIIEQQSLKRLEEK 200


Top