BLASTX nr result

ID: Dioscorea21_contig00002354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002354
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   751   0.0  
emb|CBI29363.3| unnamed protein product [Vitis vinifera]              734   0.0  
ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   724   0.0  
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   724   0.0  
ref|XP_002455046.1| hypothetical protein SORBIDRAFT_03g003520 [S...   704   0.0  

>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
          Length = 635

 Score =  751 bits (1939), Expect = 0.0
 Identities = 389/512 (75%), Positives = 431/512 (84%), Gaps = 4/512 (0%)
 Frame = -1

Query: 1635 FEELGLEEEVMGAVRELGISVPTEIQCIGVPSVLEGKSVVLGSHTGSGKTLAYLLPLVQL 1456
            FEELGL EEVM AVRE GISVPTEIQCIGVP+VLEG+SVVLGSHTGSGKTLAY+LPLVQL
Sbjct: 121  FEELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQL 180

Query: 1455 LRRDEQLYGMLMKPKRPRAIVLCPTRELCEQVFRVAKSISHHARFRSTMISGGGRLRPQE 1276
            LRRDE L G+LMKP+RPRA+VLCPTREL EQVFRVAKSISHHARFRSTM+SGGGRLRPQE
Sbjct: 181  LRRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQE 240

Query: 1275 DSLSTPVDMVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKK 1096
            DSL+ P+DMVVGTPGRVLQHIEEGNMVYG+IKYLVLDEADTMFDRGFGPDIRKFLAPLK 
Sbjct: 241  DSLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKN 300

Query: 1095 RATKPDDHGFQTVLVTATMTKAVQNLVDEEFEGIIHLRTSSLHKKVASARHDFIKLSGSE 916
            RA+K DD GFQTVLVTATMTKAVQ L+DEEF+GI+HLRTS+LHKK+ASARHDFIKLSGSE
Sbjct: 301  RASKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSE 360

Query: 915  NKLESLLQVLEPSLSKGNRVMIFCNTLNSSRAVDHFLAENQIFTVNYHGEVPAEERVENL 736
            NKLE+LLQVLEPSL+KGN+VM+FCNTLNSSRAVDHFL ENQIFTVNYHGEVPAE+RVENL
Sbjct: 361  NKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENL 420

Query: 735  KKFKSEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTS 556
            KKFK+E+GDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTS
Sbjct: 421  KKFKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTS 480

Query: 555  LVSKKDLLLASRIEEAIKKNESLESLNVDNVRRDATTTPQTVSRGRNSRILKVTSPKNRA 376
            LV+KKDLLLA+RIEEAI+KNESLE+L  DN+RRD      +  + +N+ ++KV+  KN+ 
Sbjct: 481  LVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKT 540

Query: 375  SAKSSKVSQKPAKASVS--KPSATASVKRS-PSKTGKIVKVSKPVK-FSANTSRTAXXXX 208
              +S K S K A    S  K     S K S P+K+ K VK+ KP K  SA          
Sbjct: 541  KVESMKSSSKAASTQTSGRKTLGGKSGKVSPPTKSKKTVKILKPSKSSSAGGGSKRALSG 600

Query: 207  XXXXXXXXXXXXXXXXXXKLSVVGFRGRSSAA 112
                              KLSVVGFRGRSS++
Sbjct: 601  VMKRADSKRSSSVKSSTSKLSVVGFRGRSSSS 632


>emb|CBI29363.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  734 bits (1895), Expect = 0.0
 Identities = 380/502 (75%), Positives = 422/502 (84%), Gaps = 4/502 (0%)
 Frame = -1

Query: 1605 MGAVRELGISVPTEIQCIGVPSVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLYGM 1426
            M AVRE GISVPTEIQCIGVP+VLEG+SVVLGSHTGSGKTLAY+LPLVQLLRRDE L G+
Sbjct: 1    MAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLRRDEALSGV 60

Query: 1425 LMKPKRPRAIVLCPTRELCEQVFRVAKSISHHARFRSTMISGGGRLRPQEDSLSTPVDMV 1246
            LMKP+RPRA+VLCPTREL EQVFRVAKSISHHARFRSTM+SGGGRLRPQEDSL+ P+DMV
Sbjct: 61   LMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNIPIDMV 120

Query: 1245 VGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKKRATKPDDHGF 1066
            VGTPGRVLQHIEEGNMVYG+IKYLVLDEADTMFDRGFGPDIRKFLAPLK RA+K DD GF
Sbjct: 121  VGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKSDDQGF 180

Query: 1065 QTVLVTATMTKAVQNLVDEEFEGIIHLRTSSLHKKVASARHDFIKLSGSENKLESLLQVL 886
            QTVLVTATMTKAVQ L+DEEF+GI+HLRTS+LHKK+ASARHDFIKLSGSENKLE+LLQVL
Sbjct: 181  QTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVL 240

Query: 885  EPSLSKGNRVMIFCNTLNSSRAVDHFLAENQIFTVNYHGEVPAEERVENLKKFKSEEGDC 706
            EPSL+KGN+VM+FCNTLNSSRAVDHFL ENQIFTVNYHGEVPAE+RVENLKKFK+E+GDC
Sbjct: 241  EPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDC 300

Query: 705  PTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVSKKDLLLA 526
            PTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLV+KKDLLLA
Sbjct: 301  PTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLA 360

Query: 525  SRIEEAIKKNESLESLNVDNVRRDATTTPQTVSRGRNSRILKVTSPKNRASAKSSKVSQK 346
            +RIEEAI+KNESLE+L  DN+RRD      +  + +N+ ++KV+  KN+   +S K S K
Sbjct: 361  TRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKTKVESMKSSSK 420

Query: 345  PAKASVS--KPSATASVKRS-PSKTGKIVKVSKPVK-FSANTSRTAXXXXXXXXXXXXXX 178
             A    S  K     S K S P+K+ K VK+ KP K  SA                    
Sbjct: 421  AASTQTSGRKTLGGKSGKVSPPTKSKKTVKILKPSKSSSAGGGSKRALSGVMKRADSKRS 480

Query: 177  XXXXXXXXKLSVVGFRGRSSAA 112
                    KLSVVGFRGRSS++
Sbjct: 481  SSVKSSTSKLSVVGFRGRSSSS 502


>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
            sativus]
          Length = 634

 Score =  724 bits (1870), Expect = 0.0
 Identities = 373/507 (73%), Positives = 419/507 (82%), Gaps = 1/507 (0%)
 Frame = -1

Query: 1635 FEELGLEEEVMGAVRELGISVPTEIQCIGVPSVLEGKSVVLGSHTGSGKTLAYLLPLVQL 1456
            FEELGL EEVMGAVRE+GI VP+EIQCIG+P+VLEGKSV+LGSHTGSGKTLAYLLPLVQL
Sbjct: 122  FEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQL 181

Query: 1455 LRRDEQLYGMLMKPKRPRAIVLCPTRELCEQVFRVAKSISHHARFRSTMISGGGRLRPQE 1276
            LRRDE+L+G LMKP+RPRA+VLCPTREL EQVFRV+KSISHHARFRSTM+SGGGRLRPQE
Sbjct: 182  LRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE 241

Query: 1275 DSLSTPVDMVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKK 1096
            DSLS P+DMVVGTPGRVLQHIE GNMVYGDIKYLVLDEADTMFD GFGPDIRKF+ PLK 
Sbjct: 242  DSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKH 301

Query: 1095 RATKPDDHGFQTVLVTATMTKAVQNLVDEEFEGIIHLRTSSLHKKVASARHDFIKLSGSE 916
            RA+  DD GFQT+LVTATMTKAVQ L+DEEF+GI+HLRTS+LHKK+ASARHDFIKLSGSE
Sbjct: 302  RASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSE 361

Query: 915  NKLESLLQVLEPSLSKGNRVMIFCNTLNSSRAVDHFLAENQIFTVNYHGEVPAEERVENL 736
            NKLE+LLQVLEPSL+KGNRVM+FCNTLNSSRAVDHFL ENQI TVNYHGEVPA++RVENL
Sbjct: 362  NKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENL 421

Query: 735  KKFKSEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTS 556
            KKFKS++ DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTS
Sbjct: 422  KKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS 481

Query: 555  LVSKKDLLLASRIEEAIKKNESLESLNVDNVRRDATTTPQTVSRGRNSRILKVTSPKNRA 376
            LV KKD +LA+RIEEAI+KNESLESL  D+V RD      T  + +N++++K ++   R+
Sbjct: 482  LVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKAST--GRS 539

Query: 375  SAKSSKVSQKPAKASVSKPSATASVKRSPSKTGKIVKVSKPVKFSANTSR-TAXXXXXXX 199
             AKS+  + K +          AS      K G  V VSKPVK S N  R  +       
Sbjct: 540  GAKSATSAPKSSSVHSKGEPGKASYSERTRKPG--VSVSKPVKSSRNIPRKPSSETKKQV 597

Query: 198  XXXXXXXXXXXXXXXKLSVVGFRGRSS 118
                           KL+VVGFRGRS+
Sbjct: 598  ASRKRPGSAIKSSGQKLNVVGFRGRSN 624


>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
            sativus]
          Length = 634

 Score =  724 bits (1870), Expect = 0.0
 Identities = 373/507 (73%), Positives = 419/507 (82%), Gaps = 1/507 (0%)
 Frame = -1

Query: 1635 FEELGLEEEVMGAVRELGISVPTEIQCIGVPSVLEGKSVVLGSHTGSGKTLAYLLPLVQL 1456
            FEELGL EEVMGAVRE+GI VP+EIQCIG+P+VLEGKSV+LGSHTGSGKTLAYLLPLVQL
Sbjct: 122  FEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQL 181

Query: 1455 LRRDEQLYGMLMKPKRPRAIVLCPTRELCEQVFRVAKSISHHARFRSTMISGGGRLRPQE 1276
            LRRDE+L+G LMKP+RPRA+VLCPTREL EQVFRV+KSISHHARFRSTM+SGGGRLRPQE
Sbjct: 182  LRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE 241

Query: 1275 DSLSTPVDMVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKK 1096
            DSLS P+DMVVGTPGRVLQHIE GNMVYGDIKYLVLDEADTMFD GFGPDIRKF+ PLK 
Sbjct: 242  DSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKH 301

Query: 1095 RATKPDDHGFQTVLVTATMTKAVQNLVDEEFEGIIHLRTSSLHKKVASARHDFIKLSGSE 916
            RA+  DD GFQT+LVTATMTKAVQ L+DEEF+GI+HLRTS+LHKK+ASARHDFIKLSGSE
Sbjct: 302  RASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSE 361

Query: 915  NKLESLLQVLEPSLSKGNRVMIFCNTLNSSRAVDHFLAENQIFTVNYHGEVPAEERVENL 736
            NKLE+LLQVLEPSL+KGNRVM+FCNTLNSSRAVDHFL ENQI TVNYHGEVPA++RVENL
Sbjct: 362  NKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENL 421

Query: 735  KKFKSEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTS 556
            KKFKS++ DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTS
Sbjct: 422  KKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS 481

Query: 555  LVSKKDLLLASRIEEAIKKNESLESLNVDNVRRDATTTPQTVSRGRNSRILKVTSPKNRA 376
            LV KKD +LA+RIEEAI+KNESLESL  D+V RD      T  + +N++++K ++   R+
Sbjct: 482  LVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKAST--GRS 539

Query: 375  SAKSSKVSQKPAKASVSKPSATASVKRSPSKTGKIVKVSKPVKFSANTSR-TAXXXXXXX 199
             AKS+  + K +          AS      K G  V VSKPVK S N  R  +       
Sbjct: 540  GAKSATSAPKSSSVHSKGEPGKASYSERTRKPG--VSVSKPVKSSRNIPRKPSSETKKQV 597

Query: 198  XXXXXXXXXXXXXXXKLSVVGFRGRSS 118
                           KL+VVGFRGRS+
Sbjct: 598  ASRKRPGSAIKSSGQKLNVVGFRGRSN 624


>ref|XP_002455046.1| hypothetical protein SORBIDRAFT_03g003520 [Sorghum bicolor]
            gi|241927021|gb|EES00166.1| hypothetical protein
            SORBIDRAFT_03g003520 [Sorghum bicolor]
          Length = 612

 Score =  704 bits (1817), Expect = 0.0
 Identities = 368/512 (71%), Positives = 421/512 (82%), Gaps = 6/512 (1%)
 Frame = -1

Query: 1635 FEELGLEEEVMGAVRELGISVPTEIQCIGVPSVLEGKSVVLGSHTGSGKTLAYLLPLVQL 1456
            FEELGL EEVM A+ E+GIS PTEIQC+GVP+VL G SVVLGSHTGSGKTLAYLLPLVQL
Sbjct: 96   FEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQL 155

Query: 1455 LRRDEQLYGMLMKPKRPRAIVLCPTRELCEQVFRVAKSISHHARFRSTMISGGGRLRPQE 1276
            LRRDE + G+ MKP+RPRA+VLCPTREL EQV+RVAKSISHHARFRSTM+SGG RLRPQE
Sbjct: 156  LRRDEAMLGISMKPRRPRAVVLCPTRELTEQVYRVAKSISHHARFRSTMVSGGTRLRPQE 215

Query: 1275 DSLSTPVDMVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKK 1096
            DSL+ PVDMVVGTPGR+L HI++GNMVYGDIKYLVLDEADTMFD+GFGPDIRKFLAPLK 
Sbjct: 216  DSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKN 275

Query: 1095 RATKPDDHGFQTVLVTATMTKAVQNLVDEEFEGIIHLRTSSLHKKVASARHDFIKLSGSE 916
            RA KP D GFQTVLVTATMTKAVQ L+DEEFEGI+HLRTSS  K+V++ARHDFIKLSG+E
Sbjct: 276  RAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTSSFQKRVSTARHDFIKLSGAE 335

Query: 915  NKLESLLQVLEPSLSKGNRVMIFCNTLNSSRAVDHFLAENQIFTVNYHGEVPAEERVENL 736
            NKLE+LLQVLEPSL+KGN+VM+FCNTLNSSRAVDHFL ENQI TVNYHGEVPAEERVENL
Sbjct: 336  NKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENL 395

Query: 735  KKFKSEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTS 556
             KF++EEGDCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTS
Sbjct: 396  NKFRNEEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS 455

Query: 555  LVSKKDLLLASRIEEAIKKNESLESLNVDNVRRDATTTPQTVS-RGRNSRILKVTSPKNR 379
            +V+KKD+ LA+RIEEA+KKNESLE+L  +NVRR A  +PQ+VS +GR SR++K ++    
Sbjct: 456  IVAKKDVALATRIEEAMKKNESLEALTTNNVRRAA--SPQSVSTKGRPSRLVKTSNALKV 513

Query: 378  ASAKSSKVSQKPAKASVSKPSATASVKRSPSKT-GKIVKVSKPVKFS----ANTSRTAXX 214
             + K  +     +K+S +    T++ +RSP K+  K  K + P K      + +S  A  
Sbjct: 514  VNQKGRRGVALSSKSSRTPKDTTSTRRRSPLKSQAKTTKSAAPRKAKPLKPSQSSTKASK 573

Query: 213  XXXXXXXXXXXXXXXXXXXXKLSVVGFRGRSS 118
                                KLSVVGFRGRSS
Sbjct: 574  SKAKPEGRRSKSDALNKLGTKLSVVGFRGRSS 605


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