BLASTX nr result

ID: Dioscorea21_contig00002348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002348
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275973.1| PREDICTED: tubulin alpha chain [Vitis vinifera]   782   0.0  
gb|AGG37285.1| alpha-tubulin 3 [Salix arbutifolia]                    779   0.0  
ref|XP_002510010.1| tubulin alpha chain, putative [Ricinus commu...   778   0.0  
gb|ACJ60905.1| alpha tubulin [Betula pendula]                         778   0.0  
gb|ABX57816.1| alpha tubulin [Picea wilsonii]                         778   0.0  

>ref|XP_002275973.1| PREDICTED: tubulin alpha chain [Vitis vinifera]
          Length = 450

 Score =  782 bits (2019), Expect = 0.0
 Identities = 394/452 (87%), Positives = 397/452 (87%)
 Frame = +2

Query: 50   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSPGGGDDAFNTFFSETGAGK 229
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDK+PGGGDDAFNTFFSETGAGK
Sbjct: 1    MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTPGGGDDAFNTFFSETGAGK 60

Query: 230  HVPRAVFVDLEPTVIDEVRTGYYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 409
            HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 410  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 589
            RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121  RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 590  VVEPYNSVLSTHSLLEHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLNR 769
            VVEPYNSVLSTHSLLEHT                                     TNLNR
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTY-----------TNLNR 229

Query: 770  LISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 949
            L+SQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA
Sbjct: 230  LVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 289

Query: 950  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 1129
            EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT
Sbjct: 290  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 349

Query: 1130 GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYV 1309
            GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYV
Sbjct: 350  GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYV 409

Query: 1310 GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 1405
            GEGMEEGEFSEAREDLAALEKDYEEVGAESAE
Sbjct: 410  GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 441


>gb|AGG37285.1| alpha-tubulin 3 [Salix arbutifolia]
          Length = 451

 Score =  779 bits (2011), Expect = 0.0
 Identities = 394/452 (87%), Positives = 396/452 (87%)
 Frame = +2

Query: 50   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSPGGGDDAFNTFFSETGAGK 229
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDK+ GGGDDAFNTFFSETGAGK
Sbjct: 1    MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 230  HVPRAVFVDLEPTVIDEVRTGYYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 409
            HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 410  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 589
            RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121  RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 590  VVEPYNSVLSTHSLLEHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLNR 769
            VVEPYNSVLSTHSLLEHT                                     TNLNR
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICKRSLDIERPTY-----------TNLNR 229

Query: 770  LISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 949
            LISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA
Sbjct: 230  LISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 289

Query: 950  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 1129
            EITNSAFEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT
Sbjct: 290  EITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 349

Query: 1130 GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYV 1309
            GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYV
Sbjct: 350  GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYV 409

Query: 1310 GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 1405
            GEGMEEGEFSEAREDLAALEKDYEEVGAESAE
Sbjct: 410  GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 441


>ref|XP_002510010.1| tubulin alpha chain, putative [Ricinus communis]
            gi|223550711|gb|EEF52197.1| tubulin alpha chain, putative
            [Ricinus communis]
          Length = 451

 Score =  778 bits (2010), Expect = 0.0
 Identities = 393/452 (86%), Positives = 396/452 (87%)
 Frame = +2

Query: 50   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSPGGGDDAFNTFFSETGAGK 229
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDK+ GGGDDAFNTFFSETGAGK
Sbjct: 1    MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 230  HVPRAVFVDLEPTVIDEVRTGYYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 409
            HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 410  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 589
            RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121  RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 590  VVEPYNSVLSTHSLLEHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLNR 769
            VVEPYNSVLSTHSLLEHT                                     TNLNR
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTY-----------TNLNR 229

Query: 770  LISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 949
            L+SQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA
Sbjct: 230  LVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 289

Query: 950  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 1129
            EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT
Sbjct: 290  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 349

Query: 1130 GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYV 1309
            GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYV
Sbjct: 350  GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYV 409

Query: 1310 GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 1405
            GEGMEEGEFSEAREDLAALEKDYEEVGAESAE
Sbjct: 410  GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 441


>gb|ACJ60905.1| alpha tubulin [Betula pendula]
          Length = 450

 Score =  778 bits (2010), Expect = 0.0
 Identities = 393/452 (86%), Positives = 396/452 (87%)
 Frame = +2

Query: 50   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSPGGGDDAFNTFFSETGAGK 229
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDK+ GGGDDAFNTFFSETGAGK
Sbjct: 1    MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 230  HVPRAVFVDLEPTVIDEVRTGYYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 409
            HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 410  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 589
            RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121  RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 590  VVEPYNSVLSTHSLLEHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLNR 769
            VVEPYNSVLSTHSLLEHT                                     TNLNR
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTY-----------TNLNR 229

Query: 770  LISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 949
            L+SQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA
Sbjct: 230  LVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 289

Query: 950  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 1129
            EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT
Sbjct: 290  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 349

Query: 1130 GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYV 1309
            GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYV
Sbjct: 350  GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYV 409

Query: 1310 GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 1405
            GEGMEEGEFSEAREDLAALEKDYEEVGAESAE
Sbjct: 410  GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 441


>gb|ABX57816.1| alpha tubulin [Picea wilsonii]
          Length = 451

 Score =  778 bits (2010), Expect = 0.0
 Identities = 393/452 (86%), Positives = 396/452 (87%)
 Frame = +2

Query: 50   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSPGGGDDAFNTFFSETGAGK 229
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDK+ GGGDDAFNTFFSETGAGK
Sbjct: 1    MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 230  HVPRAVFVDLEPTVIDEVRTGYYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 409
            HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 410  RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 589
            RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121  RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 590  VVEPYNSVLSTHSLLEHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLNR 769
            VVEPYNSVLSTHSLLEHT                                     TNLNR
Sbjct: 181  VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTY-----------TNLNR 229

Query: 770  LISQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 949
            L+SQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA
Sbjct: 230  LVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVA 289

Query: 950  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 1129
            EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT
Sbjct: 290  EITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPT 349

Query: 1130 GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYV 1309
            GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYV
Sbjct: 350  GFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYV 409

Query: 1310 GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 1405
            GEGMEEGEFSEAREDLAALEKDYEEVGAESAE
Sbjct: 410  GEGMEEGEFSEAREDLAALEKDYEEVGAESAE 441


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