BLASTX nr result

ID: Dioscorea21_contig00002325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002325
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chlorop...   347   4e-93
gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]           346   7e-93
ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chlorop...   342   1e-91
gb|ABK96601.1| unknown [Populus trichocarpa x Populus deltoides]      342   1e-91
ref|XP_002302562.1| predicted protein [Populus trichocarpa] gi|1...   342   1e-91

>ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chloroplastic [Vitis vinifera]
           gi|297745362|emb|CBI40442.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  347 bits (890), Expect = 4e-93
 Identities = 164/215 (76%), Positives = 195/215 (90%)
 Frame = +3

Query: 192 VVLVDRSDSEKVNRLKSVFLEKVIPILKEEFSYTNIHEVPKIEKVVVNCGMGDAEQNSKG 371
           +VLV++S++ K NRLK+ +LEK++P+LKEEFSY N+HEVPKIEK+V+NCG+GDA QN+KG
Sbjct: 48  IVLVEKSEAVKTNRLKTTYLEKIVPLLKEEFSYQNMHEVPKIEKIVLNCGIGDASQNAKG 107

Query: 372 LEAAIKDLAVITGQRPVKTRAKNSIAAFKLREGTTVGIAVTLRGNVMYSFLDRLINLGLP 551
           LEAA+ +LA+I GQRPVKTRA+ SIA FKLREG  VGIAVTLRGN+MYSFLDRLINLGLP
Sbjct: 108 LEAAMNELALIAGQRPVKTRARASIATFKLREGQPVGIAVTLRGNMMYSFLDRLINLGLP 167

Query: 552 RTRDFQGLNPNSFDGHGNYSIGMRDQSVFPEIRYEAIGKQRGMDVCITTTAKTDKEAQRL 731
           RTRDFQG+NPNSFDGHGNYSIGM+DQSVFPEIR++ +G+ RGMDVCITTTAKTDKE Q+L
Sbjct: 168 RTRDFQGVNPNSFDGHGNYSIGMKDQSVFPEIRFDILGRARGMDVCITTTAKTDKEGQQL 227

Query: 732 LSLLGMPFREGGGPTVLIRRKKKKAAHFDQKGKGR 836
           L+L+GMPFREGGG TV+ R+KK KA HFD K KGR
Sbjct: 228 LALMGMPFREGGGSTVVQRKKKLKAHHFDSKSKGR 262


>gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]
          Length = 221

 Score =  346 bits (888), Expect = 7e-93
 Identities = 160/217 (73%), Positives = 196/217 (90%)
 Frame = +3

Query: 186 TGVVLVDRSDSEKVNRLKSVFLEKVIPILKEEFSYTNIHEVPKIEKVVVNCGMGDAEQNS 365
           +G++LV+ ++SEK+NRLK+ +L+K++P+LKEEFSYTNIH+VPK+EK+VVNCG+GDA QN+
Sbjct: 2   SGIILVEETESEKLNRLKTTYLQKIVPLLKEEFSYTNIHQVPKVEKIVVNCGIGDAAQNA 61

Query: 366 KGLEAAIKDLAVITGQRPVKTRAKNSIAAFKLREGTTVGIAVTLRGNVMYSFLDRLINLG 545
           KGL+AA+ DLA ITGQRPVKTRAK +IA FKLREG  +G+AVTLRGNVMYSFLDRLINLG
Sbjct: 62  KGLDAAMGDLANITGQRPVKTRAKKAIATFKLREGQPIGLAVTLRGNVMYSFLDRLINLG 121

Query: 546 LPRTRDFQGLNPNSFDGHGNYSIGMRDQSVFPEIRYEAIGKQRGMDVCITTTAKTDKEAQ 725
           LPRTRDFQG+N NSFDGHGN+SIG ++Q VFPEIRY+A+GK RGMDVCITTTAKTDKE  
Sbjct: 122 LPRTRDFQGVNSNSFDGHGNFSIGFKEQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGY 181

Query: 726 RLLSLLGMPFREGGGPTVLIRRKKKKAAHFDQKGKGR 836
           RLL+L+GMPFREGGGP+ ++R+KK K+ HFD K K R
Sbjct: 182 RLLALMGMPFREGGGPSTVVRKKKLKSHHFDSKSKTR 218


>ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine
           max]
          Length = 267

 Score =  342 bits (877), Expect = 1e-91
 Identities = 160/225 (71%), Positives = 196/225 (87%)
 Frame = +3

Query: 162 VAAPTTSSTGVVLVDRSDSEKVNRLKSVFLEKVIPILKEEFSYTNIHEVPKIEKVVVNCG 341
           V +   S++GVVLV++S++EK NRLK+ + EK+IP+L EEFSYTN H+VPKIEK+VVNCG
Sbjct: 40  VVSVKASASGVVLVEKSEAEKANRLKTAYTEKIIPLLMEEFSYTNKHQVPKIEKIVVNCG 99

Query: 342 MGDAEQNSKGLEAAIKDLAVITGQRPVKTRAKNSIAAFKLREGTTVGIAVTLRGNVMYSF 521
           +GDA QN+KGL+AAI DLA+ITGQRP+KTRA+ S+A FK+REG  +GIAVTLRGN+MYSF
Sbjct: 100 IGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATFKIREGQPLGIAVTLRGNMMYSF 159

Query: 522 LDRLINLGLPRTRDFQGLNPNSFDGHGNYSIGMRDQSVFPEIRYEAIGKQRGMDVCITTT 701
           LDR+INLGLPRTRDFQG+NPNSFDGHGNYSIG++DQ VFPEIR + +GK RGMD+CI TT
Sbjct: 160 LDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVGKPRGMDICIVTT 219

Query: 702 AKTDKEAQRLLSLLGMPFREGGGPTVLIRRKKKKAAHFDQKGKGR 836
           A TD+EAQ+LL+L+GMPFREG GP   IR+KK K+ HFD K KGR
Sbjct: 220 ANTDQEAQKLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGR 264


>gb|ABK96601.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 267

 Score =  342 bits (877), Expect = 1e-91
 Identities = 166/219 (75%), Positives = 194/219 (88%), Gaps = 4/219 (1%)
 Frame = +3

Query: 192 VVLVDRSDSEKVNRLKSVFLEKVIPILKEEFSYTNIHEVPKIEKVVVNCGMGDAEQNSKG 371
           VVLVD+S++EK NRLK+ FLEK++P+L EEFSYTNIH+VPKI+KVVVNCG+GDA QN+KG
Sbjct: 46  VVLVDKSEAEKSNRLKTTFLEKIVPLLIEEFSYTNIHQVPKIQKVVVNCGIGDAAQNAKG 105

Query: 372 LEAAIKDLAVITGQRPVKTRAKNSIAAFKLREGTTVGIAVTLRGNVMYSFLDRLINLGLP 551
           L+AAI DLA+ITGQRPVKTRA+NS+A FK+REG  +GIAVTLRGN+MYSFLDRL+NLGLP
Sbjct: 106 LDAAINDLALITGQRPVKTRARNSVATFKIREGQPLGIAVTLRGNLMYSFLDRLVNLGLP 165

Query: 552 RTRDFQGLNPNSFDGHGNYSIGMRDQSVFPEIRYEAIGKQRGMDVCITTTAKTDKEAQRL 731
           RTRDFQG+  NSFDGHGNYSIG+RDQSVFPEIR++A+GK RGMDVCI TTA TD+EAQRL
Sbjct: 166 RTRDFQGVTANSFDGHGNYSIGIRDQSVFPEIRFDAVGKARGMDVCIATTANTDQEAQRL 225

Query: 732 LSLLGMPFRE----GGGPTVLIRRKKKKAAHFDQKGKGR 836
           L+L+GMPFRE    GGG T   R+KK KA HFD K KGR
Sbjct: 226 LALMGMPFREGGGGGGGATAQPRKKKLKAHHFDSKSKGR 264


>ref|XP_002302562.1| predicted protein [Populus trichocarpa] gi|118485785|gb|ABK94741.1|
           unknown [Populus trichocarpa]
           gi|222844288|gb|EEE81835.1| predicted protein [Populus
           trichocarpa]
          Length = 266

 Score =  342 bits (877), Expect = 1e-91
 Identities = 165/218 (75%), Positives = 194/218 (88%), Gaps = 3/218 (1%)
 Frame = +3

Query: 192 VVLVDRSDSEKVNRLKSVFLEKVIPILKEEFSYTNIHEVPKIEKVVVNCGMGDAEQNSKG 371
           VVLVD+S++EK NRLK+ FLEK++P+L EEFSYTNIH+VPKI+KVVVNCG+GDA QN+KG
Sbjct: 46  VVLVDKSEAEKSNRLKTTFLEKIVPLLIEEFSYTNIHQVPKIQKVVVNCGIGDAAQNAKG 105

Query: 372 LEAAIKDLAVITGQRPVKTRAKNSIAAFKLREGTTVGIAVTLRGNVMYSFLDRLINLGLP 551
           L+AAI DLA+ITGQRPVKTRA+NS+A FK+REG  +GIAVTLRGN+MYSFLDRL+NLGLP
Sbjct: 106 LDAAINDLALITGQRPVKTRARNSVATFKIREGQPLGIAVTLRGNLMYSFLDRLVNLGLP 165

Query: 552 RTRDFQGLNPNSFDGHGNYSIGMRDQSVFPEIRYEAIGKQRGMDVCITTTAKTDKEAQRL 731
           RTRDFQG+  NSFDGHGNYS+G+RDQSVFPEIR++A+GK RGMDVCI TTA TD+EAQRL
Sbjct: 166 RTRDFQGVTANSFDGHGNYSVGIRDQSVFPEIRFDAVGKARGMDVCIATTANTDQEAQRL 225

Query: 732 LSLLGMPFRE---GGGPTVLIRRKKKKAAHFDQKGKGR 836
           L+L+GMPFRE   GGG T   R+KK KA HFD K KGR
Sbjct: 226 LALMGMPFREGGGGGGATAQPRKKKLKAHHFDSKSKGR 263


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