BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002314
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indi...   292   9e-77
tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family...   284   2e-74
gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza...   283   7e-74
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz...   275   2e-71
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza...   275   2e-71

>gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indica Group]
          Length = 1350

 Score =  292 bits (748), Expect = 9e-77
 Identities = 146/346 (42%), Positives = 218/346 (63%), Gaps = 5/346 (1%)
 Frame = -3

Query: 1026 MADGRLDEASSDFVHSVRFTFYTPEEVRRISVKKITKPDLFDAKDAPIVDGLYDPALGPL 847
            MAD R DEA+S+ V+S+ F+FY  +E++RISVK+ITK D  DAK+ P+  GL DPA+GP 
Sbjct: 94   MADVRPDEAASEEVNSIHFSFYNDDEIKRISVKQITKSDRVDAKNCPVPGGLLDPAMGPT 153

Query: 846  DKIDSCKTCGQLSVRCPGHYGHIDFGKPLYHPLLFANLKGLLQVTCFHCHRFRFKEERVE 667
            +  D+CK+CGQ S+RCPGH+GHI+  KPL++PLLF +LK LLQVTCFHCH+FR  +E+V+
Sbjct: 154  NDTDTCKSCGQQSIRCPGHFGHIELAKPLFNPLLFMSLKNLLQVTCFHCHKFRLNKEQVD 213

Query: 666  KYALQLQLIIKGNPIVAKNFDEQPVSTXXXXXXXXXXXXDSKNLTQQK----WTSLQQSE 499
            +Y  +L+L+++G+   AKN ++                   K+   ++    WTS+Q  E
Sbjct: 214  RYTNELELLVRGDIAHAKNLEDLGGKVLSKEDDETEATSGDKSARSERENKTWTSIQLKE 273

Query: 498  ALLVLSKFLAKNPKRCQNCKKRNPTITSPVFGWFNKTTSEEAIRANFIIDSNLGLASTEV 319
            AL + SK + K  K+C +C+K+NP I +P++GW  K T+  ++RAN I ++ L      V
Sbjct: 274  ALSIFSKLMKKRQKKCAHCEKKNPIIKNPIYGWLIKDTTSSSVRANAIANAKLS-GDGHV 332

Query: 318  DEPKCLLDQETQDEDSFSEGGVSLIDEELPVPAKKRRNTKLKSKELLPPDFTKLLESSGR 139
            ++ +              E GVS +DEEL  P    R +  +++ +      +++ SSG+
Sbjct: 333  NDSR--------------ETGVSGLDEELTSPGTLSRRSTNETRRISDDTIKEMVASSGK 378

Query: 138  KHLLPSEVEFILEALWEKEKFFCRLLCDIQEGGLN-SSSEKGHTMF 4
            KHLL +EVE IL+ LW+KE  FC LLCD Q+  L+ S   +G+ MF
Sbjct: 379  KHLLTTEVESILKDLWKKEARFCMLLCDFQQNTLSVSEKRRGYEMF 424


>tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 548

 Score =  284 bits (727), Expect = 2e-74
 Identities = 150/350 (42%), Positives = 217/350 (62%), Gaps = 9/350 (2%)
 Frame = -3

Query: 1026 MADGRLDEASSDFVHSVRFTFYTPEEVRRISVKKITKPDLFDAKDAPIVDGLYDPALGPL 847
            MADG+  +A+S+ V S+ F+FY+ +E++RIS+KKITK +  DAK+ P+  GL DPA+GP+
Sbjct: 1    MADGQHIQAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPI 60

Query: 846  DKIDSCKTCGQLSVRCPGHYGHIDFGKPLYHPLLFANLKGLLQVTCFHCHRFRFKEERVE 667
            + ID CK+CGQ SVRCPGH+GHI+  KPL++PLLF +LK LL VTCFHCH+FR  +E+V+
Sbjct: 61   NDIDICKSCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVD 120

Query: 666  KYALQLQLIIKGNPIVAKNF----DEQPVSTXXXXXXXXXXXXDSKNLTQQK-WTSLQQS 502
            +Y  +L+L++KG+ + AKN     +E  +S             +S ++  +K WTS+Q  
Sbjct: 121  RYVNELELLVKGDIVCAKNLEDSVEEAYLSKEDENMNKTTSGDNSSSVKDKKTWTSIQLK 180

Query: 501  EALLVLSKFLAKNPKRCQNCKKRNPTITSPVFGWFNKTTSEEAIRANFIIDSNLGLASTE 322
            E L + SK + K  K+C  C  ++PTI+SP+FGW  K T   A+R N I D  L      
Sbjct: 181  EVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVKDTKASAVRTNAIADFKL------ 234

Query: 321  VDEPKCLLDQETQDEDSFSEGGVSLIDEELPVPAKKRRNTKLKSKELLPPDFTKLLESSG 142
                     +   D  +  E GVS ++EE   P    +++  + + L      +L+ SSG
Sbjct: 235  ---------KGDGDIHNSGETGVSGLEEESSSPGMVSKDSINEVRGLSDDTIKELVASSG 285

Query: 141  RKHLLPSEVEFILEALWEKEKFFCRLLCDIQEGGLNSSSE----KGHTMF 4
            +KHLLP+EVE IL+ LW+ E  FC LLCD Q+   N SSE    +G+ MF
Sbjct: 286  KKHLLPTEVESILKDLWKNEARFCMLLCDFQK---NMSSEPEKRRGYEMF 332


>gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza brachyantha]
          Length = 1138

 Score =  283 bits (723), Expect = 7e-74
 Identities = 143/341 (41%), Positives = 206/341 (60%), Gaps = 5/341 (1%)
 Frame = -3

Query: 1011 LDEASSDFVHSVRFTFYTPEEVRRISVKKITKPDLFDAKDAPIVDGLYDPALGPLDKIDS 832
            L +A+S+ V S+ F+FY  +E++RISVK+ITKPD  DAK+ P+  GL DPA+GP    D+
Sbjct: 5    LVQAASEEVESIHFSFYNDDEIKRISVKQITKPDRLDAKNCPVPGGLLDPAMGPTSDTDT 64

Query: 831  CKTCGQLSVRCPGHYGHIDFGKPLYHPLLFANLKGLLQVTCFHCHRFRFKEERVEKYALQ 652
            CK+CGQ SVRCPGH+GHI+  KPL++PLLF +LK LL +TCFHCH+FR   E+V++Y  +
Sbjct: 65   CKSCGQHSVRCPGHFGHIELAKPLFNPLLFLSLKNLLHMTCFHCHKFRLNREQVDRYTDE 124

Query: 651  LQLIIKGNPIVAKNFDEQPVSTXXXXXXXXXXXXDSKNLTQQK----WTSLQQSEALLVL 484
            L+L++KG+   AKN ++                   K+   +     WTS+Q  E L + 
Sbjct: 125  LELLVKGDIAHAKNLEDSGGKVLLEEDDKTEATSGDKSTCSESENKTWTSIQLKEVLSIF 184

Query: 483  SKFLAKNPKRCQNCKKRNPTITSPVFGWFNKTTSEEAIRANFIIDSNLGLASTEVDEPKC 304
            + F+ K  K+C +C K+NP I+ P++GW  K     A+RAN I D+              
Sbjct: 185  ANFMKKRQKKCTHCNKKNPKISHPIYGWLIKDADISAVRANAIADAK------------- 231

Query: 303  LLDQETQDEDSFSEGGVSLIDEELPVPAKKRRNTKLKSKELLPPDFTKLLESSGRKHLLP 124
             L  + +  DS  E GVS +DEEL  P    R +  +++ +      +++ SSG+KHLL 
Sbjct: 232  -LSGDVRFHDS-RETGVSGLDEELTSPGTSSRGSTNETRRISDDTIKEMVASSGKKHLLA 289

Query: 123  SEVEFILEALWEKEKFFCRLLCDIQEGGLNSSSEK-GHTMF 4
            +EVE IL+ LW+ E  FC LLCD Q+  LN S +K G+ MF
Sbjct: 290  TEVESILKDLWKNEARFCMLLCDFQQNTLNVSEKKRGYEMF 330


>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
            Group]
          Length = 1748

 Score =  275 bits (702), Expect = 2e-71
 Identities = 140/349 (40%), Positives = 213/349 (61%), Gaps = 13/349 (3%)
 Frame = -3

Query: 1011 LDEASSDFVHSVRFTFYTPEEVRRISVKKITKPDLFDAKDAPIVDGLYDPALGPLDKIDS 832
            L +A+S+ V+S+ F+FY  +E++RISVK+ITK D  DAK+ P+  GL DPA+GP +  D+
Sbjct: 5    LAQAASEEVNSIHFSFYNDDEIKRISVKQITKSDRVDAKNCPVPGGLLDPAMGPTNDTDT 64

Query: 831  CKTCGQLSVRCPGHYGHIDFGKPLYHPLLFANLKGLLQVTCFHCHRFRFKEERVEKYA-- 658
            CK+CGQ S+RCPGH+GHI+  KPL++PLLF +LK LLQVTCFHCH+FR  +E+  ++   
Sbjct: 65   CKSCGQQSIRCPGHFGHIELAKPLFNPLLFMSLKNLLQVTCFHCHKFRLNKEQHSRFCRI 124

Query: 657  ------LQLQLIIKGNPIVAKNFDEQPVSTXXXXXXXXXXXXDSKNLTQQK----WTSLQ 508
                  L+L+L+++G+   AKN ++                   K+   ++    WTS+Q
Sbjct: 125  TKIFDFLELELLVRGDIAHAKNLEDLGGKVLSKEDDETEATSGDKSARSERENKTWTSIQ 184

Query: 507  QSEALLVLSKFLAKNPKRCQNCKKRNPTITSPVFGWFNKTTSEEAIRANFIIDSNLGLAS 328
              EAL + SK + K  K+C +C+K+NP I +P++GW  K T+  ++RAN I ++ L    
Sbjct: 185  LKEALSIFSKLMKKRQKKCAHCEKKNPIIKNPIYGWLIKDTTSSSVRANAIANAKLS-GD 243

Query: 327  TEVDEPKCLLDQETQDEDSFSEGGVSLIDEELPVPAKKRRNTKLKSKELLPPDFTKLLES 148
              V++ +              E GVS +DEEL  P    R +  +++ +      +++ S
Sbjct: 244  GHVNDSR--------------ETGVSGLDEELTSPGTLSRRSTNETRRISDDTIKEMVAS 289

Query: 147  SGRKHLLPSEVEFILEALWEKEKFFCRLLCDIQEGGLN-SSSEKGHTMF 4
            SG+KHLL +EVE IL+ LW+KE  FC LLCD Q+  L+ S   +G+ MF
Sbjct: 290  SGKKHLLTTEVESILKDLWKKEARFCMLLCDFQQNTLSVSEKRRGYEMF 338


>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
          Length = 1830

 Score =  275 bits (702), Expect = 2e-71
 Identities = 143/341 (41%), Positives = 205/341 (60%), Gaps = 5/341 (1%)
 Frame = -3

Query: 1011 LDEASSDFVHSVRFTFYTPEEVRRISVKKITKPDLFDAKDAPIVDGLYDPALGPLDKIDS 832
            L +A+S+ V S+ F+FY  +E+RRISVK+ITK D  DAK+ P+  GL DPA+GP +  D+
Sbjct: 5    LVQAASEEVDSIHFSFYNDDEIRRISVKQITKADRLDAKNCPVPGGLLDPAMGPTNDTDT 64

Query: 831  CKTCGQLSVRCPGHYGHIDFGKPLYHPLLFANLKGLLQVTCFHCHRFRFKEERVEKYALQ 652
            CK+CGQ SVRCPGH+GHI+  KPL++PLLF +LK LL VTCFHCH+FR    +V++Y  +
Sbjct: 65   CKSCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNRGQVDRYTNE 124

Query: 651  LQLIIKGNPIVAKNFDEQPVSTXXXXXXXXXXXXDSKNLTQQ----KWTSLQQSEALLVL 484
            L+L+++G+  +AKN ++                   K    +     WTS+Q  EAL + 
Sbjct: 125  LELLVRGDIALAKNLEDSGGKVFLAEDDETEATSGDKLACSEGENKTWTSIQLKEALSIF 184

Query: 483  SKFLAKNPKRCQNCKKRNPTITSPVFGWFNKTTSEEAIRANFIIDSNLGLASTEVDEPKC 304
            +K L K  K+C +C K+NP I+ PV+GW  K T+  ++RAN I D+ L   S   D    
Sbjct: 185  AKLLKKRQKKCVHCDKKNPKISHPVYGWLIKDTT-SSVRANVIADAKLSGDSRVHDS--- 240

Query: 303  LLDQETQDEDSFSEGGVSLIDEELPVPAKKRRNTKLKSKELLPPDFTKLLESSGRKHLLP 124
                         E  VS +DEEL  P    R +  +++ +      +++ SSG+KHLL 
Sbjct: 241  ------------RETAVSGLDEELTSPGTSSRGSTNETRRISDDTIKEMVASSGKKHLLT 288

Query: 123  SEVEFILEALWEKEKFFCRLLCDIQEGGLNSSSE-KGHTMF 4
            +EVE IL+ LW+ E  FC LLCD Q+  LN S + +G+ MF
Sbjct: 289  TEVESILKNLWKNEARFCMLLCDFQQNTLNVSDKGRGYEMF 329