BLASTX nr result

ID: Dioscorea21_contig00002309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002309
         (1877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053860.1| Os04g0614000 [Oryza sativa Japonica Group] g...   414   e-113
ref|XP_002447088.1| hypothetical protein SORBIDRAFT_06g028400 [S...   408   e-111
ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   405   e-110
ref|XP_002884927.1| short-chain dehydrogenase/reductase family p...   402   e-109
gb|ACN30689.1| unknown [Zea mays] gi|413919503|gb|AFW59435.1| hy...   402   e-109

>ref|NP_001053860.1| Os04g0614000 [Oryza sativa Japonica Group]
           gi|38347363|emb|CAE05217.2| OSJNBa0070C17.24 [Oryza
           sativa Japonica Group] gi|113565431|dbj|BAF15774.1|
           Os04g0614000 [Oryza sativa Japonica Group]
           gi|116309871|emb|CAH66908.1| OSIGBa0126B18.1 [Oryza
           sativa Indica Group] gi|125549710|gb|EAY95532.1|
           hypothetical protein OsI_17378 [Oryza sativa Indica
           Group]
          Length = 299

 Score =  414 bits (1064), Expect = e-113
 Identities = 200/247 (80%), Positives = 223/247 (90%)
 Frame = -2

Query: 742 MDSPFEVDILNGKVALLTGGGSGIGFEITTQFGKHGAAVAIMGRRRQVLDAAVSALQSQG 563
           ++SPF  D+L GK AL+TGGGSGIGFEI  Q  +HGA VAIMGRRR+VLD AV+AL+S G
Sbjct: 3   VESPFRADVLRGKAALVTGGGSGIGFEIAAQLARHGAHVAIMGRRREVLDKAVAALRSHG 62

Query: 562 IRAIGIEGDVRKREDAARAVETTVQHFGRLDILVNGAAGNFLASPEDLSPNGFRTVIDID 383
           +RA+G EGDVRK+EDAAR V  TVQHFG+LDILVNGAAGNFLASPEDL+P GFRTV+DID
Sbjct: 63  LRAVGFEGDVRKQEDAARVVAATVQHFGKLDILVNGAAGNFLASPEDLTPKGFRTVVDID 122

Query: 382 SVGTYTMCHEALKYLKKGGPGRDSSTGGLILNISATLHYTASWYQIHVSAAKAAVDSITR 203
           +VGTYTMC+EALKYLKKGGPG+  STGG+I+NISATLHYTA+WYQIHVSAAKA VDSITR
Sbjct: 123 TVGTYTMCYEALKYLKKGGPGKGPSTGGVIINISATLHYTAAWYQIHVSAAKAGVDSITR 182

Query: 202 SLALEWGTDYDIRVNGIAPGPIEGTPGLRKLAPEEMKVKLREAMPLFKIGERWDIAMAAL 23
           SLALEWGTDYDIRVNGIAPGPIEGTPG+RKLAPEEM    RE MPLFK+GE+WDIAMAAL
Sbjct: 183 SLALEWGTDYDIRVNGIAPGPIEGTPGMRKLAPEEMAKGSREIMPLFKLGEKWDIAMAAL 242

Query: 22  YLASDAG 2
           YLASDAG
Sbjct: 243 YLASDAG 249


>ref|XP_002447088.1| hypothetical protein SORBIDRAFT_06g028400 [Sorghum bicolor]
           gi|241938271|gb|EES11416.1| hypothetical protein
           SORBIDRAFT_06g028400 [Sorghum bicolor]
          Length = 297

 Score =  408 bits (1048), Expect = e-111
 Identities = 195/247 (78%), Positives = 223/247 (90%)
 Frame = -2

Query: 742 MDSPFEVDILNGKVALLTGGGSGIGFEITTQFGKHGAAVAIMGRRRQVLDAAVSALQSQG 563
           M+SPF  D+L GK AL+TGGGSGIGFEI TQ  +HGA VA+MGRRR+VLD AV+AL+S+G
Sbjct: 1   MESPFRADLLRGKAALVTGGGSGIGFEIATQLARHGAHVALMGRRREVLDKAVAALRSEG 60

Query: 562 IRAIGIEGDVRKREDAARAVETTVQHFGRLDILVNGAAGNFLASPEDLSPNGFRTVIDID 383
           ++A+G +GDVRK+EDAAR +  TV+HFG+LDILVNGAAGNFLASPEDL P GFRTV+DID
Sbjct: 61  LKAVGFDGDVRKQEDAARVIAATVEHFGKLDILVNGAAGNFLASPEDLKPKGFRTVLDID 120

Query: 382 SVGTYTMCHEALKYLKKGGPGRDSSTGGLILNISATLHYTASWYQIHVSAAKAAVDSITR 203
           ++GTYTMC+EALKYLKKGGPGRD S+GGLI+NISATL YTA+WYQIHVSAAKA VDSITR
Sbjct: 121 TLGTYTMCYEALKYLKKGGPGRDPSSGGLIINISATLQYTAAWYQIHVSAAKAGVDSITR 180

Query: 202 SLALEWGTDYDIRVNGIAPGPIEGTPGLRKLAPEEMKVKLREAMPLFKIGERWDIAMAAL 23
           SLALEWGTDYDIRVNGIAPGPI+ TPG+RKLAPEEM    RE MPLFK+GE+WDIAMAAL
Sbjct: 181 SLALEWGTDYDIRVNGIAPGPIQDTPGMRKLAPEEMGKGKRETMPLFKLGEKWDIAMAAL 240

Query: 22  YLASDAG 2
           YLASDAG
Sbjct: 241 YLASDAG 247


>ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
           gi|297736138|emb|CBI24176.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  405 bits (1041), Expect = e-110
 Identities = 199/247 (80%), Positives = 222/247 (89%)
 Frame = -2

Query: 742 MDSPFEVDILNGKVALLTGGGSGIGFEITTQFGKHGAAVAIMGRRRQVLDAAVSALQSQG 563
           M+SPF+ D+L GKVALLTGGGSGIGFEI+TQFG HGA++AIMGRR+QVLD+AVS L SQG
Sbjct: 1   MESPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQG 60

Query: 562 IRAIGIEGDVRKREDAARAVETTVQHFGRLDILVNGAAGNFLASPEDLSPNGFRTVIDID 383
           I A+G  GDVRK+EDA R VE+TV+HFGRLDILVN AAGNFL S EDLSPNGFRTV+DID
Sbjct: 61  IPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDID 120

Query: 382 SVGTYTMCHEALKYLKKGGPGRDSSTGGLILNISATLHYTASWYQIHVSAAKAAVDSITR 203
           SVGT+TMCHEALKYLKKGGPGR  S+GG ILNISATLHYTA+WYQIHVSAAKAAVD+ TR
Sbjct: 121 SVGTFTMCHEALKYLKKGGPGRSFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATTR 180

Query: 202 SLALEWGTDYDIRVNGIAPGPIEGTPGLRKLAPEEMKVKLREAMPLFKIGERWDIAMAAL 23
           +LALEWGTDYDIRVNGIAPGPI  T G+ KLAPEE+  K RE MPL+K+GE+WDIAMAAL
Sbjct: 181 NLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAAL 240

Query: 22  YLASDAG 2
           YLASDAG
Sbjct: 241 YLASDAG 247


>ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  402 bits (1033), Expect = e-109
 Identities = 195/248 (78%), Positives = 226/248 (91%), Gaps = 1/248 (0%)
 Frame = -2

Query: 742 MDSPFEVDILNGKVALLTGGGSGIGFEITTQFGKHGAAVAIMGRRRQVLDAAVSALQSQG 563
           M+SPF+ D++ G+VAL+TGGGSGIGFEI++QFGKHGA++AIMGRR+QVLD AVSAL+S G
Sbjct: 1   MESPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60

Query: 562 IRAIGIEGDVRKREDAARAVETTVQHFGRLDILVNGAAGNFLASPEDLSPNGFRTVIDID 383
           I+AIG+EGDVRK+EDA R VE T QHFGR+DILVN AAGNFLA+ EDLSPNGFRTV+DID
Sbjct: 61  IQAIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120

Query: 382 SVGTYTMCHEALKYLKKGGPGRDSST-GGLILNISATLHYTASWYQIHVSAAKAAVDSIT 206
           +VGT+ MCH ALKYLKKGGPGRDSST GG I+NISATLHYTASWYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 205 RSLALEWGTDYDIRVNGIAPGPIEGTPGLRKLAPEEMKVKLREAMPLFKIGERWDIAMAA 26
           R+LALEWGTDYDIRVNGIAPGPI GTPG+ KL PEE++ K RE MPL+K+GE+WDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAA 240

Query: 25  LYLASDAG 2
           LYL+ D+G
Sbjct: 241 LYLSCDSG 248


>gb|ACN30689.1| unknown [Zea mays] gi|413919503|gb|AFW59435.1| hypothetical protein
           ZEAMMB73_837053 [Zea mays]
          Length = 298

 Score =  402 bits (1032), Expect = e-109
 Identities = 195/248 (78%), Positives = 221/248 (89%), Gaps = 1/248 (0%)
 Frame = -2

Query: 742 MDSPFEVDILNGKVALLTGGGSGIGFEITTQFGKHGAAVAIMGRRRQVLDAAVSALQSQG 563
           M+SPF  D+L GK AL+TGGGSGIGFEI  Q  +HGA VA+MGRRR+VLD AV+AL+S+G
Sbjct: 1   MESPFRADLLRGKAALVTGGGSGIGFEIAAQLARHGAHVALMGRRREVLDKAVAALRSEG 60

Query: 562 IRAIGIEGDVRKREDAARAVETTVQHFGRLDILVNGAAGNFLASPEDLSPNGFRTVIDID 383
           +RA+G +GDVRK+EDAAR +  TV+HFG+LDILVNGAAGNFLASPEDL P GFRTV+DID
Sbjct: 61  LRAVGFDGDVRKQEDAARVIAATVEHFGKLDILVNGAAGNFLASPEDLKPKGFRTVLDID 120

Query: 382 SVGTYTMCHEALKYLKKGGPGRDSSTGGLILNISATLHYTASWYQIHVSAAKAAVDSITR 203
           +VGTYTMC+EALKYLKKGGPGR  S+GGLI+NISATL YTA+WYQIHVSAAKA VD ITR
Sbjct: 121 TVGTYTMCYEALKYLKKGGPGRGPSSGGLIINISATLQYTAAWYQIHVSAAKAGVDGITR 180

Query: 202 SLALEWGTDYDIRVNGIAPGPIEGTPGLRKLAPEEMKVK-LREAMPLFKIGERWDIAMAA 26
           SLALEWGTDYDIRVNGIAPGPI+ TPG+RKLAPEEM  K  RE MPLFK+GE+WDIAMAA
Sbjct: 181 SLALEWGTDYDIRVNGIAPGPIQDTPGMRKLAPEEMGNKGKRETMPLFKLGEKWDIAMAA 240

Query: 25  LYLASDAG 2
           LYLASDAG
Sbjct: 241 LYLASDAG 248


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