BLASTX nr result

ID: Dioscorea21_contig00002305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002305
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   370   e-100
emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]   370   e-100
ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding...   369   e-100
gb|ACF22767.1| SNF2P [Brachypodium distachyon]                        369   e-100
gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare]                 368   1e-99

>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
            vinifera]
          Length = 876

 Score =  370 bits (950), Expect = e-100
 Identities = 198/333 (59%), Positives = 246/333 (73%), Gaps = 4/333 (1%)
 Frame = +1

Query: 1    KACSHPYLFXXXXXXXXXXXXHLILASGKLIVLDQLLKRLRAEGHRVLLFAQMTHTLDIL 180
            KACSHPYLF            HL+ ASGKLI+LDQLL++L   GHRVLLFAQMTHTLDIL
Sbjct: 338  KACSHPYLFPGIEPEPYEEGEHLVQASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDIL 397

Query: 181  QDFLELHKYTYERLDGSVRAEERFAAIRSFSLQPSEGPVKPAADSNDAFVFMISTRAGGV 360
            QDF+EL KY+YERLDGSVRAEERF+AIRSFS Q  EG +      + AFVFMISTRAGGV
Sbjct: 398  QDFMELRKYSYERLDGSVRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGV 457

Query: 361  GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMKHVLSINLVTEHSIEEVIMRRAESK 540
            GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM HVLSINLVT  ++EE+IMRRAE K
Sbjct: 458  GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERK 517

Query: 541  LNLSNNVVGQKDDTQEGGKLVG-EAVDMRSLIVGLQMFGPTDVTAENLSEKNIADLNAMV 717
            L LS+NVVG+ D  +EG ++ G EA D+RS+I GL+M  P+++  +  SE N+++L+AM 
Sbjct: 518  LQLSHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMA 577

Query: 718  SKVIEMR-KHETSQEGQRFEINSANLF--DNKLMKSVSDSAKFDSVLDEAAYSSWVEKFR 888
             KV+ +R + +  ++ ++FE+N  +L    + +M   S S  FD  LDEA+Y  WVEKF+
Sbjct: 578  DKVVAIRHEQQLGKDDRKFEVNPMDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFK 637

Query: 889  EASQSIEASALSLGKRRNVLDETQPSREAQKKK 987
            EASQS +   + +G RR + +E     EA +KK
Sbjct: 638  EASQSSDDPIIQVGNRRKLPEEKLLKLEAARKK 670


>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score =  370 bits (950), Expect = e-100
 Identities = 198/333 (59%), Positives = 246/333 (73%), Gaps = 4/333 (1%)
 Frame = +1

Query: 1    KACSHPYLFXXXXXXXXXXXXHLILASGKLIVLDQLLKRLRAEGHRVLLFAQMTHTLDIL 180
            KACSHPYLF            HL+ ASGKLI+LDQLL++L   GHRVLLFAQMTHTLDIL
Sbjct: 418  KACSHPYLFPGIEPEPYEEGEHLVQASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDIL 477

Query: 181  QDFLELHKYTYERLDGSVRAEERFAAIRSFSLQPSEGPVKPAADSNDAFVFMISTRAGGV 360
            QDF+EL KY+YERLDGSVRAEERF+AIRSFS Q  EG +      + AFVFMISTRAGGV
Sbjct: 478  QDFMELRKYSYERLDGSVRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGV 537

Query: 361  GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMKHVLSINLVTEHSIEEVIMRRAESK 540
            GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM HVLSINLVT  ++EE+IMRRAE K
Sbjct: 538  GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERK 597

Query: 541  LNLSNNVVGQKDDTQEGGKLVG-EAVDMRSLIVGLQMFGPTDVTAENLSEKNIADLNAMV 717
            L LS+NVVG+ D  +EG ++ G EA D+RS+I GL+M  P+++  +  SE N+++L+AM 
Sbjct: 598  LQLSHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMA 657

Query: 718  SKVIEMR-KHETSQEGQRFEINSANLF--DNKLMKSVSDSAKFDSVLDEAAYSSWVEKFR 888
             KV+ +R + +  ++ ++FE+N  +L    + +M   S S  FD  LDEA+Y  WVEKF+
Sbjct: 658  DKVVAIRHEQQLGKDDRKFEVNPMDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFK 717

Query: 889  EASQSIEASALSLGKRRNVLDETQPSREAQKKK 987
            EASQS +   + +G RR + +E     EA +KK
Sbjct: 718  EASQSSDDPIIQVGNRRKLPEEKLLKLEAARKK 750


>ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
            [Brachypodium distachyon]
          Length = 893

 Score =  369 bits (947), Expect = e-100
 Identities = 201/333 (60%), Positives = 238/333 (71%), Gaps = 4/333 (1%)
 Frame = +1

Query: 1    KACSHPYLFXXXXXXXXXXXXHLILASGKLIVLDQLLKRLRAEGHRVLLFAQMTHTLDIL 180
            KACSHPYLF            HL+ ASGKLIVLD +LK+L   GHRVLLFAQMTHTLDIL
Sbjct: 348  KACSHPYLFSGIEPEPYEEGEHLVQASGKLIVLDLILKKLHRLGHRVLLFAQMTHTLDIL 407

Query: 181  QDFLELHKYTYERLDGSVRAEERFAAIRSFSLQPSEGPVKPAADSNDAFVFMISTRAGGV 360
            QDFLEL  YTYERLDGSVRAEERFAAIR FS QP++G  +   + + AFVFMISTRAGGV
Sbjct: 408  QDFLELRNYTYERLDGSVRAEERFAAIRKFSSQPTKGVARDDDNPSGAFVFMISTRAGGV 467

Query: 361  GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMKHVLSINLVTEHSIEEVIMRRAESK 540
            GLNL+ ADTVIFYEQDWNPQ DKQALQRAHRIGQ+ HVLSINLV++ +IEEVIMRRAE K
Sbjct: 468  GLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRAERK 527

Query: 541  LNLSNNVVGQKDDTQ-EGGKLVGEAVDMRSLIVGLQMFGPTDVTAENLSEKNIADLNAMV 717
            L LS+N+ G +D T  +G  L  EA DMRS+I GL  F P D   E ++E+ +A L +M 
Sbjct: 528  LKLSHNIFGDEDTTDGKGEDLRNEASDMRSIIFGLHQFDPADTATETMNEETLAKLESMS 587

Query: 718  SKVIEMRKHETSQEGQR-FEINSANLFDNK--LMKSVSDSAKFDSVLDEAAYSSWVEKFR 888
              VI+MR HE S++  R FEIN  NL D+   ++    DS   D  ++EAAY SWV KF+
Sbjct: 588  ENVIKMRAHEPSEKDDRAFEIN-PNLTDSSAAVITRTCDSINIDPGINEAAYLSWVGKFK 646

Query: 889  EASQSIEASALSLGKRRNVLDETQPSREAQKKK 987
            EAS SIE   +   ++R+  +E    REA KKK
Sbjct: 647  EASHSIENVTVEQERQRSAPEEKVLKREANKKK 679


>gb|ACF22767.1| SNF2P [Brachypodium distachyon]
          Length = 721

 Score =  369 bits (947), Expect = e-100
 Identities = 201/333 (60%), Positives = 238/333 (71%), Gaps = 4/333 (1%)
 Frame = +1

Query: 1    KACSHPYLFXXXXXXXXXXXXHLILASGKLIVLDQLLKRLRAEGHRVLLFAQMTHTLDIL 180
            KACSHPYLF            HL+ ASGKLIVLD +LK+L   GHRVLLFAQMTHTLDIL
Sbjct: 216  KACSHPYLFSGIEPEPYEEGEHLVQASGKLIVLDLILKKLHRLGHRVLLFAQMTHTLDIL 275

Query: 181  QDFLELHKYTYERLDGSVRAEERFAAIRSFSLQPSEGPVKPAADSNDAFVFMISTRAGGV 360
            QDFLEL  YTYERLDGSVRAEERFAAIR FS QP++G  +   + + AFVFMISTRAGGV
Sbjct: 276  QDFLELRNYTYERLDGSVRAEERFAAIRKFSSQPTKGVARDDDNPSGAFVFMISTRAGGV 335

Query: 361  GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMKHVLSINLVTEHSIEEVIMRRAESK 540
            GLNL+ ADTVIFYEQDWNPQ DKQALQRAHRIGQ+ HVLSINLV++ +IEEVIMRRAE K
Sbjct: 336  GLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRAERK 395

Query: 541  LNLSNNVVGQKDDTQ-EGGKLVGEAVDMRSLIVGLQMFGPTDVTAENLSEKNIADLNAMV 717
            L LS+N+ G +D T  +G  L  EA DMRS+I GL  F P D   E ++E+ +A L +M 
Sbjct: 396  LKLSHNIFGDEDTTDGKGEDLRNEASDMRSIIFGLHQFDPADTATETMNEETLAKLESMS 455

Query: 718  SKVIEMRKHETSQEGQR-FEINSANLFDNK--LMKSVSDSAKFDSVLDEAAYSSWVEKFR 888
              VI+MR HE S++  R FEIN  NL D+   ++    DS   D  ++EAAY SWV KF+
Sbjct: 456  ENVIKMRAHEPSEKDDRAFEIN-PNLTDSSAAVITRTCDSINIDPGINEAAYLSWVGKFK 514

Query: 889  EASQSIEASALSLGKRRNVLDETQPSREAQKKK 987
            EAS SIE   +   ++R+  +E    REA KKK
Sbjct: 515  EASHSIENVTVEQERQRSAPEEKVLKREANKKK 547


>gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare]
          Length = 882

 Score =  368 bits (944), Expect = 1e-99
 Identities = 200/333 (60%), Positives = 240/333 (72%), Gaps = 4/333 (1%)
 Frame = +1

Query: 1    KACSHPYLFXXXXXXXXXXXXHLILASGKLIVLDQLLKRLRAEGHRVLLFAQMTHTLDIL 180
            KACSHPYLF            HL+ ASGKLIVLD +L++L   GHRV+LFAQMT TLDIL
Sbjct: 338  KACSHPYLFSGIEPEPYEEGEHLVQASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDIL 397

Query: 181  QDFLELHKYTYERLDGSVRAEERFAAIRSFSLQPSEGPVKPAADSNDAFVFMISTRAGGV 360
            QDFLEL  YTYERLDGSVRAEERFAAIR+FS QP++G V+   + + AF+FMISTRAGGV
Sbjct: 398  QDFLELRNYTYERLDGSVRAEERFAAIRNFSSQPTKGVVRDDNNPSGAFIFMISTRAGGV 457

Query: 361  GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMKHVLSINLVTEHSIEEVIMRRAESK 540
            GLNL+ ADTVIFYEQDWNPQ DKQALQR HRIGQ+ HVLSINLV++ +IEEVIMRRAE K
Sbjct: 458  GLNLIGADTVIFYEQDWNPQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERK 517

Query: 541  LNLSNNVVGQKDDTQEGGKLVG-EAVDMRSLIVGLQMFGPTDVTAENLSEKNIADLNAMV 717
            L LS+N+ G KD T   GK  G EA DMRS+I+GL  F P D  AE ++E+ +A L +M 
Sbjct: 518  LKLSHNIFGDKDATDGKGKDFGNEANDMRSIILGLHQFDPADTAAETINEETLAKLKSMS 577

Query: 718  SKVIEMRKHETSQEGQR-FEINSANLFDNK--LMKSVSDSAKFDSVLDEAAYSSWVEKFR 888
              VI+MR HE S++  R FEIN  +L D    ++    DS   D  +DEAAY SWVE+F+
Sbjct: 578  ENVIKMRTHEPSEKDDRAFEIN-PDLTDGSGAMITRACDSISIDPGVDEAAYLSWVERFK 636

Query: 889  EASQSIEASALSLGKRRNVLDETQPSREAQKKK 987
            EAS SIE   + L ++R   ++    REA KKK
Sbjct: 637  EASHSIEDVPVELERQRPAPEDKLLKREANKKK 669


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