BLASTX nr result
ID: Dioscorea21_contig00002300
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002300
(1861 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519926.1| pentatricopeptide repeat-containing protein,... 424 e-116
ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|2... 419 e-114
ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containi... 414 e-113
emb|CAN82548.1| hypothetical protein VITISV_005814 [Vitis vinifera] 413 e-113
ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containi... 411 e-112
>ref|XP_002519926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540972|gb|EEF42530.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 481
Score = 424 bits (1089), Expect = e-116
Identities = 216/439 (49%), Positives = 293/439 (66%), Gaps = 2/439 (0%)
Frame = +3
Query: 42 DILSRAPSADVDSALSRCGIIPTTDLVDSILALSYSSPAGAIKFFRWSGLSLSHTPRSWN 221
DIL+R D++SALS GI T D++ +L LSYS+PA A++FFRW+G S +HTP SWN
Sbjct: 44 DILTRVSPHDMESALSSTGINLTCDIIHEVLKLSYSNPASAVEFFRWAGRSGTHTPYSWN 103
Query: 222 LMVDILGRNCLFEPMWDAIRSMKHHXXXXXXXXXXXXXXXXXXXXXKEAVMSFDVMDRYG 401
LMVD+LG+N LFE MWDAIRSMK EA+MSFD+MD+YG
Sbjct: 104 LMVDLLGKNQLFEAMWDAIRSMKQENVLSMATFASVFGSYCKAGSFSEAIMSFDIMDKYG 163
Query: 402 VPQDSLAVNSLLSALFQNPDPLSSQTAADFFDRIKSRVPPDPDTFDILLQGWERTGNVAR 581
+ QD +AVNSLLSA+ + + A +FFDRIK ++PPD DT+ ILL+GWE+ GN A+
Sbjct: 164 IQQDVIAVNSLLSAICNEDN--QTIKAVEFFDRIKLKIPPDGDTYAILLEGWEKEGNAAK 221
Query: 582 AKNTFGEMVIRVGWEAATMSSFEAFLMTLICGDQPDEAIKFLQVMKNNNRLPGINFFASA 761
AKN FGEMVI VGW M ++ AFL L+ Q D+A FL++MK LPG+ F++ A
Sbjct: 222 AKNIFGEMVIHVGWSPENMPAYNAFLNLLVRESQTDDAFDFLRLMKEKGCLPGLKFYSDA 281
Query: 762 LNVFIDQNDSVHALALWEIMVIQGGLVPNHVMCNTIISQLCKSDMIQDAYNVLDGMTLNG 941
L++ + +ND +HA+ +W+IMV GL+PN +M N++I LC ++ I +A+ + D M +G
Sbjct: 282 LDMLLKRNDVLHAVPMWDIMV-DTGLMPNLLMYNSMIGLLCNNNDIDNAFRLFDDMVFHG 340
Query: 942 VFPDSLPYNTIFECLIQNKRVHDAGSFFNEMRKNEQLLSPSICASAIRMFFSEYDPIMAM 1121
FPD L Y IF CL++NK+V A SFF+EM KNE + CA+AI MF DP MA+
Sbjct: 341 AFPDFLTYKMIFRCLVKNKKVSQAASFFHEMIKNENPPTHLDCAAAITMFMGGDDPEMAI 400
Query: 1122 EVWDYMLKEHVSPTDDAANELLIGLKDLGRLSEVRYHAEFMFDKGIELHASTMDKLKPSF 1301
E+W+YM+ + P D++AN LL+GL +LGRLSEV AE M D+ I +H STM KLK SF
Sbjct: 401 EIWNYMVDDQELPLDESANALLVGLGNLGRLSEVSRFAEDMLDRRINIHESTMAKLKASF 460
Query: 1302 YK--ASKKDAYEHLARRMK 1352
YK S +D ++ L+R+ K
Sbjct: 461 YKEGRSSRDRFDSLSRKWK 479
>ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|222840654|gb|EEE78201.1|
predicted protein [Populus trichocarpa]
Length = 472
Score = 419 bits (1078), Expect = e-114
Identities = 212/444 (47%), Positives = 296/444 (66%), Gaps = 2/444 (0%)
Frame = +3
Query: 33 VIWDILSRAPSADVDSALSRCGIIPTTDLVDSILALSYSSPAGAIKFFRWSGLSLSHTPR 212
++++I++R S D++SALS GI PT D+V +L L + + AI FFRW+G + T
Sbjct: 32 LLFEIITRPSSHDIESALSSTGIPPTHDIVHEVLKLCHENATSAIAFFRWAGRTHKLTSY 91
Query: 213 SWNLMVDILGRNCLFEPMWDAIRSMKHHXXXXXXXXXXXXXXXXXXXXXKEAVMSFDVMD 392
+WNLMVD+LG+N ++EPMWDA+R+MK EA+MSF VMD
Sbjct: 92 AWNLMVDLLGKNWMYEPMWDAVRTMKQEDMLSMATFVSVFGSYCMAGKFNEAIMSFYVMD 151
Query: 393 RYGVPQDSLAVNSLLSALFQNPDPLSSQTAADFFDRIKSRVPPDPDTFDILLQGWERTGN 572
+YGV QD + VNSLL+A+ + + A +FFD+IK ++PP+ DTF ILL+GWE+ G+
Sbjct: 152 KYGVQQDVVVVNSLLTAICHEENQTAK--ALEFFDKIKLKIPPNADTFAILLEGWEKEGD 209
Query: 573 VARAKNTFGEMVIRVGWEAATMSSFEAFLMTLICGDQPDEAIKFLQVMKNNNRLPGINFF 752
VA+AK TFGEMVI+VGW MS++++FL TL+ G Q DEA+KFL+VMK N LPG+ FF
Sbjct: 210 VAKAKTTFGEMVIKVGWSPENMSAYDSFLTTLVRGSQADEAVKFLRVMKGKNCLPGLKFF 269
Query: 753 ASALNVFIDQNDSVHALALWEIMVIQGGLVPNHVMCNTIISQLCKSDMIQDAYNVLDGMT 932
++AL++ + QNDS HA+ LW+IMV GL+PN +M N +I C ++ + +A+ +LD M
Sbjct: 270 SNALDMLVKQNDSTHAIPLWDIMV-GSGLLPNLIMYNAMIGLHCNNNDVDNAFRLLDEMV 328
Query: 933 LNGVFPDSLPYNTIFECLIQNKRVHDAGSFFNEMRKNEQLLSPSICASAIRMFFSEYDPI 1112
NG FPD L +N IF CLI+NK+VH G FF EM KNE + C++AI DP
Sbjct: 329 FNGAFPDFLTFNIIFRCLIKNKKVHRVGKFFYEMIKNESPPTHFDCSAAIMTLIDGGDPE 388
Query: 1113 MAMEVWDYMLKEHVSPTDDAANELLIGLKDLGRLSEVRYHAEFMFDKGIELHASTMDKLK 1292
MA+E+W+Y+++ HV P D +AN LLIG +LGR+S+VR AE M D+ I ++ STM KLK
Sbjct: 389 MAIEIWNYIVENHVLPLDGSANALLIGFCNLGRMSQVRRFAEDMLDRRINIYESTMKKLK 448
Query: 1293 PSFYKASK--KDAYEHLARRMKHP 1358
SF K + +D Y+ L RR K P
Sbjct: 449 DSFDKTGRHGRDKYDCLIRRWKAP 472
>ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
gi|296085476|emb|CBI29208.3| unnamed protein product
[Vitis vinifera]
Length = 464
Score = 414 bits (1063), Expect = e-113
Identities = 218/438 (49%), Positives = 293/438 (66%), Gaps = 2/438 (0%)
Frame = +3
Query: 45 ILSRAPSADVDSALSRCGIIPTTDLVDSILALSYSSPAGAIKFFRWSGLSLSHTPRSWNL 224
I + AP A V +ALS I PT D+V +L LSYS+ + A++FFRW+GL+ H+ SWNL
Sbjct: 24 ISATAPHALV-AALSATSIPPTPDVVQDVLRLSYSNSSAAVEFFRWAGLTRKHSAHSWNL 82
Query: 225 MVDILGRNCLFEPMWDAIRSMKHHXXXXXXXXXXXXXXXXXXXXXKEAVMSFDVMDRYGV 404
+VD+LG+N FEPMWDAIRSM++ EA+MSF+VMDRYG+
Sbjct: 83 IVDLLGKNSKFEPMWDAIRSMRNEGALSLSAFISVFGSYCSVGRVNEAIMSFEVMDRYGI 142
Query: 405 PQDSLAVNSLLSALFQNPDPLSSQTAADFFDRIKSRVPPDPDTFDILLQGWERTGNVARA 584
P D A+N+LLSA+ S+ A +FF++IK ++ PD DTF ILL+GWER GNV +A
Sbjct: 143 PPDVAAMNALLSAICCEGG--STTLALEFFEKIKVKITPDGDTFMILLEGWEREGNVTKA 200
Query: 585 KNTFGEMVIRVGWEAATMSSFEAFLMTLICGDQPDEAIKFLQVMKNNNRLPGINFFASAL 764
K+TFGEMV+R+GW M ++ + LMTL+ G + +EAIKFL VMK LPG+ FF++AL
Sbjct: 201 KSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKFLLVMKGKGCLPGLKFFSNAL 260
Query: 765 NVFIDQNDSVHALALWEIMVIQGGLVPNHVMCNTIISQLCKSDMIQDAYNVLDGMTLNGV 944
+V + QNDS HA+ALW+IM + GG +PN +M NTII LC + +A+ LD M GV
Sbjct: 261 DVLLKQNDSTHAIALWDIM-LDGGFMPNLMMYNTIIGILCNAGDADNAFRFLDEMVFYGV 319
Query: 945 FPDSLPYNTIFECLIQNKRVHDAGSFFNEMRKNEQLLSPSICASAIRMFFSEYDPIMAME 1124
F DS YN IF+CL+++K+VH+AG FF EM KNE PS CA+AI M F DP MA+E
Sbjct: 320 FADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSNCAAAIAMCFDGDDPEMAIE 379
Query: 1125 VWDYMLKEHVSPTDDAANELLIGLKDLGRLSEVRYHAEFMFDKGIELHASTMDKLKPSFY 1304
+W YM++ +SP D++AN LLIGL +L R S+ R AE M D I++H STM+KLK + Y
Sbjct: 380 IWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDMLDMKIKIHESTMEKLKNARY 439
Query: 1305 K--ASKKDAYEHLARRMK 1352
K S +D + L +R K
Sbjct: 440 KDGRSARDTCDSLWKRWK 457
>emb|CAN82548.1| hypothetical protein VITISV_005814 [Vitis vinifera]
Length = 493
Score = 413 bits (1062), Expect = e-113
Identities = 217/438 (49%), Positives = 293/438 (66%), Gaps = 2/438 (0%)
Frame = +3
Query: 45 ILSRAPSADVDSALSRCGIIPTTDLVDSILALSYSSPAGAIKFFRWSGLSLSHTPRSWNL 224
I + AP A + +ALS I PT D+V +L LSYS+ + A++FFRW+GL+ H+ SWNL
Sbjct: 24 ISATAPHA-LXAALSATXIPPTPDVVQDVLRLSYSNXSAAVEFFRWAGLTRKHSAHSWNL 82
Query: 225 MVDILGRNCLFEPMWDAIRSMKHHXXXXXXXXXXXXXXXXXXXXXKEAVMSFDVMDRYGV 404
+VD+LG+N FEPMWDAIRSM++ EA+MSF+VMDRYG+
Sbjct: 83 IVDLLGKNSKFEPMWDAIRSMRNEGALSLSAFISVFGSYCSVGRVNEAIMSFEVMDRYGI 142
Query: 405 PQDSLAVNSLLSALFQNPDPLSSQTAADFFDRIKSRVPPDPDTFDILLQGWERTGNVARA 584
P D A+N+LLSA+ S+ A +FF++IK ++ PD DTF ILL+GWER GNV +A
Sbjct: 143 PPDVAAMNALLSAICCEGG--STTLALEFFEKIKVKITPDGDTFMILLEGWEREGNVTKA 200
Query: 585 KNTFGEMVIRVGWEAATMSSFEAFLMTLICGDQPDEAIKFLQVMKNNNRLPGINFFASAL 764
K+TFGEMV+R+GW M ++ + LMTL+ G + +EAIKFL VMK LPG+ FF++AL
Sbjct: 201 KSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKFLLVMKGKGCLPGLKFFSNAL 260
Query: 765 NVFIDQNDSVHALALWEIMVIQGGLVPNHVMCNTIISQLCKSDMIQDAYNVLDGMTLNGV 944
+V + QNDS HA+ALW+IM + GG +PN +M NTII LC + +A+ LD M GV
Sbjct: 261 DVLLKQNDSTHAIALWDIM-LDGGFMPNLMMYNTIIGILCNAGDADNAFRFLDEMVFYGV 319
Query: 945 FPDSLPYNTIFECLIQNKRVHDAGSFFNEMRKNEQLLSPSICASAIRMFFSEYDPIMAME 1124
F DS YN IF+CL+++K+VH+AG FF EM KNE PS CA+AI M F DP MA+E
Sbjct: 320 FADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSNCAAAIAMCFDGDDPEMAIE 379
Query: 1125 VWDYMLKEHVSPTDDAANELLIGLKDLGRLSEVRYHAEFMFDKGIELHASTMDKLKPSFY 1304
+W YM++ +SP D++AN LLIGL +L R S+ R AE M D I++H STM+KLK + Y
Sbjct: 380 IWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDMLDMKIKIHESTMEKLKNARY 439
Query: 1305 K--ASKKDAYEHLARRMK 1352
K S +D + L +R K
Sbjct: 440 KDGRSARDTCDSLWKRWK 457
>ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 488
Score = 411 bits (1056), Expect = e-112
Identities = 208/439 (47%), Positives = 287/439 (65%), Gaps = 2/439 (0%)
Frame = +3
Query: 42 DILSRAPSADVDSALSRCGIIPTTDLVDSILALSYSSPAGAIKFFRWSGLSLSHTPRSWN 221
DIL+R+ D++SALS GI+P + + +L LSY+ P+ A+KFFRW+G H +WN
Sbjct: 48 DILTRSSPQDIESALSSSGIVPEEECTNEVLRLSYNYPSSAVKFFRWAGRGKKHPVHTWN 107
Query: 222 LMVDILGRNCLFEPMWDAIRSMKHHXXXXXXXXXXXXXXXXXXXXXKEAVMSFDVMDRYG 401
LMVD+LG+N LFEPMWDA+RSMK EAVMSFDVMDRYG
Sbjct: 108 LMVDLLGKNQLFEPMWDAVRSMKQEQKLSLSTFASVFQSYCTAARFNEAVMSFDVMDRYG 167
Query: 402 VPQDSLAVNSLLSALFQNPDPLSSQTAADFFDRIKSRVPPDPDTFDILLQGWERTGNVAR 581
V QD +AVNSLLSA+ + S +FF+ IK++VPPD DTF ILL+GWE+ GN A+
Sbjct: 168 VKQDVVAVNSLLSAICSEDNQTSF--GLEFFEGIKAKVPPDGDTFAILLEGWEKEGNAAK 225
Query: 582 AKNTFGEMVIRVGWEAATMSSFEAFLMTLICGDQPDEAIKFLQVMKNNNRLPGINFFASA 761
AK TFG+MV +GW +++++AFLMTL+ D+ ++FLQVMK+++ PG+ FF +A
Sbjct: 226 AKTTFGDMVAHIGWNKDNVAAYDAFLMTLLRAGLMDDVVRFLQVMKDHDCFPGLKFFTTA 285
Query: 762 LNVFIDQNDSVHALALWEIMVIQGGLVPNHVMCNTIISQLCKSDMIQDAYNVLDGMTLNG 941
L+ + QND+ HA+ +W++MV G LVPN +M N +I LC + + A+ +LD M +G
Sbjct: 286 LDFLVKQNDADHAVPVWDVMV-SGELVPNLIMYNAMIGLLCNNAAVDHAFRLLDEMAFHG 344
Query: 942 VFPDSLPYNTIFECLIQNKRVHDAGSFFNEMRKNEQLLSPSICASAIRMFFSEYDPIMAM 1121
FPDSL YN IFECL++NK+ + FF EM KNE + S CA+AI M F DP A
Sbjct: 345 AFPDSLTYNMIFECLVKNKKARETERFFAEMVKNEWPPTGSNCAAAIAMLFDCDDPEAAH 404
Query: 1122 EVWDYMLKEHVSPTDDAANELLIGLKDLGRLSEVRYHAEFMFDKGIELHASTMDKLKPSF 1301
E+W Y+++ V P D++AN LLIGL ++ R +EV+ AE + D+ I ++ STM LK +F
Sbjct: 405 EIWSYVVENRVKPLDESANALLIGLCNMSRFTEVKRFAEDILDRRINIYQSTMSILKDAF 464
Query: 1302 YK--ASKKDAYEHLARRMK 1352
YK S +D Y+ L RR K
Sbjct: 465 YKEGRSARDRYDSLYRRWK 483