BLASTX nr result

ID: Dioscorea21_contig00002296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002296
         (1540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation...   540   e-151
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation...   525   e-146
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c...   524   e-146
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   518   e-144
ref|XP_002323907.1| predicted protein [Populus trichocarpa] gi|2...   508   e-141

>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
            [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
            protein product [Vitis vinifera]
          Length = 410

 Score =  540 bits (1392), Expect = e-151
 Identities = 271/382 (70%), Positives = 318/382 (83%)
 Frame = -3

Query: 1454 KIAEPQVTRLCMEAQECLVIGGWLDLVSLMLTSADLIIQRVAEKDLECIYTVICSLVSRA 1275
            ++AEPQVTRLCMEAQEC+V G WLDL SLMLTSADL+  + ++KDLECI+TVIC+LV+++
Sbjct: 31   EVAEPQVTRLCMEAQECMVRGRWLDLASLMLTSADLMFSKASDKDLECIFTVICNLVTKS 90

Query: 1274 SSPDEALEMAKLITSKIIQHPNDKPAXXXXXXXXXXXXXXNPYSKFFVYMKALELAASGK 1095
             SPDEALEMAK I++KI Q PNDK A              NPYS+F+VYMKAL LA +GK
Sbjct: 91   ESPDEALEMAKFISAKITQQPNDKAALRLKILFNLYNLLENPYSRFYVYMKALNLAVNGK 150

Query: 1094 VTESIIQSFKKIDSFLEEWNIGIVDQRNLFLSISNILKDNKSTAKDSFAFLTRYLATFSG 915
            VTE II SFK +DSFL+EWNIGI+DQR L+L+ISNILK+NKS  KD F FLT+YLATFSG
Sbjct: 151  VTEHIIPSFKMMDSFLKEWNIGILDQRALYLNISNILKENKSLGKDYFKFLTKYLATFSG 210

Query: 914  DDEESYTMNDAKEEAVRAIIEFVKSPDMFQCDLLDMPAVGQLENDEKYALIYQLLKIFLA 735
            +D  +YTM++AKEEAVR I+EFV++PDMFQCDLLDMPAVGQLE D KYAL+YQLLKIFL 
Sbjct: 211  ED--AYTMSEAKEEAVRTIMEFVRAPDMFQCDLLDMPAVGQLEKDAKYALVYQLLKIFLT 268

Query: 734  HRLDAYLDFQSANSALLKSYGLVHEDCVTKMRLMSLIDLSSNASGEIPYSLIKDALQITD 555
             RLDAYLDF +ANS LLKSYGLVHEDC+TKMRLMSL+DL S+ S +IPYSLIKD L+I D
Sbjct: 269  QRLDAYLDFHAANSTLLKSYGLVHEDCITKMRLMSLVDLGSDESCQIPYSLIKDTLRIDD 328

Query: 554  DEVEYWVVKAITSKVLNCKMDQLNQLVIVSRRTERVFGPAQWQALRSKLGIWRGNIAGAI 375
            DEVE WVVKAIT K+++CKMDQ+NQ+V+VSR +ERVFG  QWQ LRSKL  WRGNIA  I
Sbjct: 329  DEVELWVVKAITVKLMDCKMDQMNQVVLVSRCSERVFGQQQWQNLRSKLLTWRGNIANVI 388

Query: 374  NTIQSKKISEDGIQASQAMAIR 309
            NTIQ+ KISEDG QA Q + IR
Sbjct: 389  NTIQANKISEDGSQAMQGLTIR 410


>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M-like
            [Cucumis sativus]
          Length = 410

 Score =  525 bits (1352), Expect = e-146
 Identities = 259/380 (68%), Positives = 313/380 (82%)
 Frame = -3

Query: 1448 AEPQVTRLCMEAQECLVIGGWLDLVSLMLTSADLIIQRVAEKDLECIYTVICSLVSRASS 1269
            AEPQV RLC+EAQEC+VIG WLDL SLMLTSADLI  +V+EKDLEC++T+IC+LV++A S
Sbjct: 33   AEPQVNRLCVEAQECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGS 92

Query: 1268 PDEALEMAKLITSKIIQHPNDKPAXXXXXXXXXXXXXXNPYSKFFVYMKALELAASGKVT 1089
            PDE+LEMAKLI++KI Q PNDKPA              NPYS+F VYMKAL+LA  GK  
Sbjct: 93   PDESLEMAKLISAKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAP 152

Query: 1088 ESIIQSFKKIDSFLEEWNIGIVDQRNLFLSISNILKDNKSTAKDSFAFLTRYLATFSGDD 909
            E II + KKI+SFL EWNIGIV+QR LFL+ISN+LK++KS+A D F FLT+YLATFSG+D
Sbjct: 153  EHIIPTLKKIESFLREWNIGIVEQRELFLAISNVLKESKSSANDYFKFLTKYLATFSGED 212

Query: 908  EESYTMNDAKEEAVRAIIEFVKSPDMFQCDLLDMPAVGQLENDEKYALIYQLLKIFLAHR 729
                T+++AKEEAV AI+EFVK+P+MF+CDLLDMPAVGQLE D KY+L+YQLLKIFL  R
Sbjct: 213  AS--TLSEAKEEAVHAIVEFVKAPNMFKCDLLDMPAVGQLEKDAKYSLVYQLLKIFLTQR 270

Query: 728  LDAYLDFQSANSALLKSYGLVHEDCVTKMRLMSLIDLSSNASGEIPYSLIKDALQITDDE 549
            LDAY++FQ+ NS+LLKSYGLVHEDC+ KMRL+SL+DL SN S  IPY+LIKD LQI DDE
Sbjct: 271  LDAYMEFQATNSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLQINDDE 330

Query: 548  VEYWVVKAITSKVLNCKMDQLNQLVIVSRRTERVFGPAQWQALRSKLGIWRGNIAGAINT 369
            VE WVVKAITSK+++CKMDQ+N++VIVSR T+RVFG  QW+ LR+KL  WRGNIA  I T
Sbjct: 331  VELWVVKAITSKLIDCKMDQMNEVVIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGT 390

Query: 368  IQSKKISEDGIQASQAMAIR 309
            I++ KI EDG QA Q +AIR
Sbjct: 391  IRANKIVEDGSQAMQGLAIR 410


>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
            gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
            putative [Ricinus communis]
          Length = 412

 Score =  524 bits (1349), Expect = e-146
 Identities = 261/384 (67%), Positives = 315/384 (82%), Gaps = 2/384 (0%)
 Frame = -3

Query: 1454 KIAEPQVTRLCMEAQECLVIGGWLDLVSLMLTSADLIIQ--RVAEKDLECIYTVICSLVS 1281
            ++AE QV+RLC+EAQEC+VIG WLDL SL+LTSAD+I    +V+EKDLECI+TVIC+LV+
Sbjct: 31   EVAEQQVSRLCVEAQECMVIGRWLDLASLILTSADVIFSNSKVSEKDLECIFTVICNLVT 90

Query: 1280 RASSPDEALEMAKLITSKIIQHPNDKPAXXXXXXXXXXXXXXNPYSKFFVYMKALELAAS 1101
            +  SPDEALEMAKLI  KIIQ P DKPA              +PYS+F+VY+KAL+LA +
Sbjct: 91   KPDSPDEALEMAKLICGKIIQQPADKPALRLKILFNLYNLLESPYSRFYVYLKALDLALN 150

Query: 1100 GKVTESIIQSFKKIDSFLEEWNIGIVDQRNLFLSISNILKDNKSTAKDSFAFLTRYLATF 921
            GKVTE ++ SFK I+SFL+EWN+ + DQR LFLSISN+L+++KS+ KDSF FLT+YLATF
Sbjct: 151  GKVTEHMVPSFKTIESFLKEWNLEVKDQRELFLSISNVLRESKSSGKDSFKFLTKYLATF 210

Query: 920  SGDDEESYTMNDAKEEAVRAIIEFVKSPDMFQCDLLDMPAVGQLENDEKYALIYQLLKIF 741
            +G+D  +Y M +AKEEAVR IIEFVKSPDMFQCDLLDMPAVGQLE D KYAL+YQLLKIF
Sbjct: 211  AGED--AYAMGEAKEEAVRTIIEFVKSPDMFQCDLLDMPAVGQLEKDGKYALVYQLLKIF 268

Query: 740  LAHRLDAYLDFQSANSALLKSYGLVHEDCVTKMRLMSLIDLSSNASGEIPYSLIKDALQI 561
            L  RLDAYL+FQ+ANSALLKSY LVHEDC+ KMRLMSL+DLS + SG IPY+LIKD L+I
Sbjct: 269  LTQRLDAYLEFQTANSALLKSYDLVHEDCIAKMRLMSLLDLSLDESGRIPYTLIKDTLRI 328

Query: 560  TDDEVEYWVVKAITSKVLNCKMDQLNQLVIVSRRTERVFGPAQWQALRSKLGIWRGNIAG 381
             DDEVE WVVKAIT+K++NCKMDQ+N++VIVS  TERVFG  QWQ LRSKL  WR N+  
Sbjct: 329  NDDEVELWVVKAITAKLINCKMDQMNEVVIVSSCTERVFGQHQWQKLRSKLATWRDNVTN 388

Query: 380  AINTIQSKKISEDGIQASQAMAIR 309
             INTIQ+ K++EDG QA Q + IR
Sbjct: 389  VINTIQANKVTEDGSQAMQGLMIR 412


>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
            factor 3 subunit M-like [Cucumis sativus]
          Length = 417

 Score =  518 bits (1334), Expect = e-144
 Identities = 259/387 (66%), Positives = 314/387 (81%), Gaps = 7/387 (1%)
 Frame = -3

Query: 1448 AEPQVTRLCMEAQECLVIGGWLDLVSLMLTSADLIIQRVAEKDLECIYTVICSLVSRASS 1269
            AEPQV RLC+EAQEC+VIG WLDL SLMLTSADLI  +V+EKDLEC++T+IC+LV++A S
Sbjct: 33   AEPQVNRLCVEAQECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGS 92

Query: 1268 PDEALEMAKLITSKIIQHPNDKPAXXXXXXXXXXXXXXNPYSKFFVYMKALELAASGKVT 1089
            PDE+LEMAKLI++KI Q PNDKPA              NPYS+F VYMKAL+LA  GK  
Sbjct: 93   PDESLEMAKLISAKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAP 152

Query: 1088 ESIIQSFKKIDSFLEEWNIGIVDQRNLFLSISNILKDNKSTAKDSFAFLTRYLATFSGDD 909
            E II + KKI+SFL EWNIGIV+QR LFL+ISN+LK++KS+A D F FLT+YLATFSG+D
Sbjct: 153  EHIIPTLKKIESFLREWNIGIVEQRELFLAISNVLKESKSSANDYFKFLTKYLATFSGED 212

Query: 908  EESYTMNDAKEEAVRAIIEFVKSPDMFQCDLLDMPAVGQLENDEKYALIYQLLKIFLAHR 729
              + T+++AKEEAV AI+EFVK+P+MF+CDLLDMPAVGQLE D KY+L+YQLLKIFL  R
Sbjct: 213  --ASTLSEAKEEAVHAIVEFVKAPNMFKCDLLDMPAVGQLEKDAKYSLVYQLLKIFLTQR 270

Query: 728  LDAYLDFQSANSALLKSYGLVHEDCVTKMRLMSLIDLSSNASGEIPYSLIKDAL------ 567
            LDAY++FQ+ NS+LLKSYGLVHEDC+ KMRL+SL+DL SN S  IPY+LIKD L      
Sbjct: 271  LDAYMEFQATNSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRXKKKL 330

Query: 566  -QITDDEVEYWVVKAITSKVLNCKMDQLNQLVIVSRRTERVFGPAQWQALRSKLGIWRGN 390
             QI DDEVE WVVKAITSK+++CKMDQ+N++VIVSR T+RVFG  QW+ LR+KL  WRGN
Sbjct: 331  SQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRCTDRVFGQHQWETLRTKLTTWRGN 390

Query: 389  IAGAINTIQSKKISEDGIQASQAMAIR 309
            IA  I TI++ KI EDG QA Q +AIR
Sbjct: 391  IANVIGTIRANKIVEDGSQAMQGLAIR 417


>ref|XP_002323907.1| predicted protein [Populus trichocarpa] gi|222866909|gb|EEF04040.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  508 bits (1307), Expect = e-141
 Identities = 262/411 (63%), Positives = 315/411 (76%), Gaps = 29/411 (7%)
 Frame = -3

Query: 1454 KIAEPQVTRLCMEAQECLVIGGWLDLVSLMLTSADLIIQ--RVAEKDLECIYTVICSLVS 1281
            ++ E QV+RLC+EAQEC+V+  WLDL SLMLTSAD++    +V+EKDLECI+TVIC+LV+
Sbjct: 31   EVMEQQVSRLCVEAQECMVMNRWLDLTSLMLTSADIVFSNSKVSEKDLECIFTVICNLVT 90

Query: 1280 RASSPDEALEMAKLITSKIIQHPNDKPAXXXXXXXXXXXXXXNPYSKFFVYMKALELAAS 1101
            ++ SPDE LEMAKLI +KIIQ P+DKPA              N Y +F+V+MKAL LA S
Sbjct: 91   KSRSPDEELEMAKLICAKIIQQPSDKPALRLKILFNLYNLLDNAYCRFYVFMKALTLAVS 150

Query: 1100 GKVTESIIQSFKKIDSFLEEWNIGIVDQRNLFLSISNILKDNKSTAKDSFAFLTRYLATF 921
            GKVTE +I SFKKIDSFL+EWN+ + DQR LFLS++N LKD+KS+AKDSF FLT+YLATF
Sbjct: 151  GKVTEHVIPSFKKIDSFLKEWNLEVQDQRELFLSVANALKDSKSSAKDSFKFLTKYLATF 210

Query: 920  SGDDEESYTMNDAKEEAVRAIIEFVKSPDMFQCDLLDMPAVGQLENDEKYALIYQLLKIF 741
            S  DE++Y M +AKEEA R IIEFVK+PDMFQCDLLDMPAVGQLE D KYAL+YQLLKIF
Sbjct: 211  S--DEDTYKMGEAKEEAARTIIEFVKAPDMFQCDLLDMPAVGQLEKDAKYALVYQLLKIF 268

Query: 740  LAHRLDAYLDFQSANSALLKSYGLVHEDCVTKMRLMSLIDLSSNASGEIPYSLIKDALQI 561
            L  RLDAYL+FQ+ANSALLKSYGLVHEDC+ KMRLMSL+DL+S+ SG IPY+LIKD L+I
Sbjct: 269  LTQRLDAYLEFQAANSALLKSYGLVHEDCIAKMRLMSLVDLASHESGRIPYALIKDTLRI 328

Query: 560  TDDEVEYWVVKAITSKVLNCKMDQLNQLVIVSRR-------------------------- 459
             +DEVE WVVKA+T+K+++CKMDQLNQ+V+V                             
Sbjct: 329  DNDEVELWVVKALTTKLIDCKMDQLNQVVLVRYSFSPSTHTHKHRETCLCALFIISGLHS 388

Query: 458  -TERVFGPAQWQALRSKLGIWRGNIAGAINTIQSKKISEDGIQASQAMAIR 309
             TERVFG  QWQALR+KLG WRGNI   INTIQ+ KI+ED  QA Q M IR
Sbjct: 389  CTERVFGLRQWQALRTKLGTWRGNIESVINTIQANKITEDSSQAVQGMMIR 439


Top