BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002291
         (1704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   207   9e-51
ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   207   9e-51
ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   207   9e-51
emb|CBI34726.3| unnamed protein product [Vitis vinifera]              207   9e-51
ref|XP_002509740.1| cleavage and polyadenylation specificity fac...   199   2e-48

>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
           [Vitis vinifera]
          Length = 392

 Score =  207 bits (526), Expect = 9e-51
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = -1

Query: 771 IAILYAVADQQEGASEEDIHQLPKYKFRRIGPSEKLGGEISGPFGGVMAECGSDPPNEHV 592
           IAILYAVADQ EGAS+EDI QL ++KFR++G  EK+ G+I G  GG+M ECG+D P EHV
Sbjct: 271 IAILYAVADQ-EGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHV 329

Query: 591 LSPEDAECCICLTSYDDGVELRELPCGHHFHCGCIDKWLYINATCPLCKYNIIKSSNNHG 412
           LS EDAECCICL++YDDGVELRELPCGHHFHC C+DKWLYINATCPLCKYNI+KSS+N G
Sbjct: 330 LSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSN-G 388

Query: 411 REEV 400
           REEV
Sbjct: 389 REEV 392



 Score =  157 bits (397), Expect = 8e-36
 Identities = 83/156 (53%), Positives = 96/156 (61%), Gaps = 7/156 (4%)
 Frame = -2

Query: 1304 VRETAAEQLEERQSDWAYSRPVVFLDVLWNMAFVGVAAGVLILSRNEKPVMPLRLWVGGY 1125
            VRETAAEQLEERQSDWAYS+PVV LD++WN AFV VAA VL+LSR E P MPLR W+ GY
Sbjct: 66   VRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFWIVGY 125

Query: 1124 ALQCLLHMVCVLIEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGY-GVEQGQE 948
            ALQC+LH+VCV +EY                                       V++   
Sbjct: 126  ALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVTLANVDEHHS 185

Query: 947  EE------RTSIAKHLESANTMFSFIWWIIGFYWVS 858
            +        +S+AKHLESANTMFSFIWWIIGFYWVS
Sbjct: 186  QTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVS 221


>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Vitis vinifera]
          Length = 383

 Score =  207 bits (526), Expect = 9e-51
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = -1

Query: 771 IAILYAVADQQEGASEEDIHQLPKYKFRRIGPSEKLGGEISGPFGGVMAECGSDPPNEHV 592
           IAILYAVADQ EGAS+EDI QL ++KFR++G  EK+ G+I G  GG+M ECG+D P EHV
Sbjct: 262 IAILYAVADQ-EGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHV 320

Query: 591 LSPEDAECCICLTSYDDGVELRELPCGHHFHCGCIDKWLYINATCPLCKYNIIKSSNNHG 412
           LS EDAECCICL++YDDGVELRELPCGHHFHC C+DKWLYINATCPLCKYNI+KSS+N G
Sbjct: 321 LSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSN-G 379

Query: 411 REEV 400
           REEV
Sbjct: 380 REEV 383



 Score =  163 bits (413), Expect = 1e-37
 Identities = 84/149 (56%), Positives = 95/149 (63%)
 Frame = -2

Query: 1304 VRETAAEQLEERQSDWAYSRPVVFLDVLWNMAFVGVAAGVLILSRNEKPVMPLRLWVGGY 1125
            VRETAAEQLEERQSDWAYS+PVV LD++WN AFV VAA VL+LSR E P MPLR W+ GY
Sbjct: 66   VRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFWIVGY 125

Query: 1124 ALQCLLHMVCVLIEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYGVEQGQEE 945
            ALQC+LH+VCV +EY                                      +    +E
Sbjct: 126  ALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVT--LASLGDE 183

Query: 944  ERTSIAKHLESANTMFSFIWWIIGFYWVS 858
              TS+AKHLESANTMFSFIWWIIGFYWVS
Sbjct: 184  SSTSVAKHLESANTMFSFIWWIIGFYWVS 212


>ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
           [Vitis vinifera]
          Length = 372

 Score =  207 bits (526), Expect = 9e-51
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = -1

Query: 771 IAILYAVADQQEGASEEDIHQLPKYKFRRIGPSEKLGGEISGPFGGVMAECGSDPPNEHV 592
           IAILYAVADQ EGAS+EDI QL ++KFR++G  EK+ G+I G  GG+M ECG+D P EHV
Sbjct: 251 IAILYAVADQ-EGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHV 309

Query: 591 LSPEDAECCICLTSYDDGVELRELPCGHHFHCGCIDKWLYINATCPLCKYNIIKSSNNHG 412
           LS EDAECCICL++YDDGVELRELPCGHHFHC C+DKWLYINATCPLCKYNI+KSS+N G
Sbjct: 310 LSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSN-G 368

Query: 411 REEV 400
           REEV
Sbjct: 369 REEV 372



 Score =  164 bits (414), Expect = 9e-38
 Identities = 83/149 (55%), Positives = 94/149 (63%)
 Frame = -2

Query: 1304 VRETAAEQLEERQSDWAYSRPVVFLDVLWNMAFVGVAAGVLILSRNEKPVMPLRLWVGGY 1125
            VRETAAEQLEERQSDWAYS+PVV LD++WN AFV VAA VL+LSR E P MPLR W+ GY
Sbjct: 66   VRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRFWIVGY 125

Query: 1124 ALQCLLHMVCVLIEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYGVEQGQEE 945
            ALQC+LH+VCV +EY                                        QG   
Sbjct: 126  ALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYS-------------SSPQGDSS 172

Query: 944  ERTSIAKHLESANTMFSFIWWIIGFYWVS 858
            +  ++AKHLESANTMFSFIWWIIGFYWVS
Sbjct: 173  QYVTVAKHLESANTMFSFIWWIIGFYWVS 201


>emb|CBI34726.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  207 bits (526), Expect = 9e-51
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = -1

Query: 771 IAILYAVADQQEGASEEDIHQLPKYKFRRIGPSEKLGGEISGPFGGVMAECGSDPPNEHV 592
           IAILYAVADQ EGAS+EDI QL ++KFR++G  EK+ G+I G  GG+M ECG+D P EHV
Sbjct: 148 IAILYAVADQ-EGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHV 206

Query: 591 LSPEDAECCICLTSYDDGVELRELPCGHHFHCGCIDKWLYINATCPLCKYNIIKSSNNHG 412
           LS EDAECCICL++YDDGVELRELPCGHHFHC C+DKWLYINATCPLCKYNI+KSS+N G
Sbjct: 207 LSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSN-G 265

Query: 411 REEV 400
           REEV
Sbjct: 266 REEV 269



 Score = 88.2 bits (217), Expect = 6e-15
 Identities = 45/99 (45%), Positives = 51/99 (51%)
 Frame = -2

Query: 1154 MPLRLWVGGYALQCLLHMVCVLIEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 975
            MPLR W+ GYALQC+LH+VCV +EY                                   
Sbjct: 1    MPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYV 60

Query: 974  GYGVEQGQEEERTSIAKHLESANTMFSFIWWIIGFYWVS 858
                  G E   +S+AKHLESANTMFSFIWWIIGFYWVS
Sbjct: 61   TLA-SLGDESSTSSVAKHLESANTMFSFIWWIIGFYWVS 98


>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223549639|gb|EEF51127.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 383

 Score =  199 bits (506), Expect = 2e-48
 Identities = 95/126 (75%), Positives = 106/126 (84%), Gaps = 2/126 (1%)
 Frame = -1

Query: 771 IAILYAVADQQEGASEEDIHQLPKYKFRRIGPSEKL--GGEISGPFGGVMAECGSDPPNE 598
           IAILYAVADQ EGAS+EDI QL K+KFRR+   EKL   G+  GP GGVM ECG+D P E
Sbjct: 260 IAILYAVADQ-EGASKEDIEQLSKFKFRRVDNDEKLTGNGDEQGPLGGVMTECGTDSPVE 318

Query: 597 HVLSPEDAECCICLTSYDDGVELRELPCGHHFHCGCIDKWLYINATCPLCKYNIIKSSNN 418
           H+LS EDAECCICL++YDDGVELRELPCGHHFHC C+DKWLYINATCPLCKYNI+KSS +
Sbjct: 319 HILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSS-S 377

Query: 417 HGREEV 400
             REEV
Sbjct: 378 RDREEV 383



 Score =  165 bits (417), Expect = 4e-38
 Identities = 84/149 (56%), Positives = 94/149 (63%)
 Frame = -2

Query: 1304 VRETAAEQLEERQSDWAYSRPVVFLDVLWNMAFVGVAAGVLILSRNEKPVMPLRLWVGGY 1125
            VRETAAEQLEERQSDWAYS+PVV LD+LWN AFV VA GVLI+SR E P MPLRLW+ GY
Sbjct: 66   VRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGY 125

Query: 1124 ALQCLLHMVCVLIEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYGVEQGQEE 945
             LQC+LHMVCV +EY                                       +    +
Sbjct: 126  GLQCVLHMVCVCVEYRRRRRRRRRVGFGIGSDGNLSSGSRGDSGEYVTL----AQLEDHD 181

Query: 944  ERTSIAKHLESANTMFSFIWWIIGFYWVS 858
              +S+AKHLESANTMFSFIWWIIGFYWVS
Sbjct: 182  GTSSVAKHLESANTMFSFIWWIIGFYWVS 210