BLASTX nr result

ID: Dioscorea21_contig00002250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002250
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06627.1| 60S ribosomal protein L24 [Elaeis guineensis]          228   1e-57
gb|ACF06439.1| 60S ribosomal protein L24 [Elaeis guineensis]          226   4e-57
gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indi...   224   3e-56
ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   223   3e-56
ref|XP_002304475.1| predicted protein [Populus trichocarpa] gi|1...   223   4e-56

>gb|ACF06627.1| 60S ribosomal protein L24 [Elaeis guineensis]
          Length = 163

 Score =  228 bits (581), Expect = 1e-57
 Identities = 117/143 (81%), Positives = 122/143 (85%)
 Frame = -2

Query: 756 MVLKTELCRFSGAKIYPGRGIRFVRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYRKQ 577
           MVLKTELCRFSGAKIYPG+GIRFVRSDSQVFLFANSKCKRYFHNRL+P+KLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 576 HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKAEVRDAAREAALREIXXXXX 397
           HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQK+RTEK EVRDAAREAALREI     
Sbjct: 61  HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 120

Query: 396 XXXXXXXXXXXXXXXKSQKTQTK 328
                          K+QKTQTK
Sbjct: 121 KTKDEKKAKKAETLAKTQKTQTK 143


>gb|ACF06439.1| 60S ribosomal protein L24 [Elaeis guineensis]
          Length = 163

 Score =  226 bits (577), Expect = 4e-57
 Identities = 115/144 (79%), Positives = 121/144 (84%)
 Frame = -2

Query: 756 MVLKTELCRFSGAKIYPGRGIRFVRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYRKQ 577
           MVLKTELCRFSGAKIYPG+GIRFVRSDSQVFLFANSKCKRYFHNRL+PAKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQ 60

Query: 576 HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKAEVRDAAREAALREIXXXXX 397
           HKKD+HAE +KKRRRTTKKPYSRSIVGATLEVIQK+RTEK EVRDAAREAALREI     
Sbjct: 61  HKKDLHAETIKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 120

Query: 396 XXXXXXXXXXXXXXXKSQKTQTKG 325
                          K+QK QTKG
Sbjct: 121 KTKDEKKAKKAELMAKTQKIQTKG 144


>gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indica Group]
          Length = 227

 Score =  224 bits (570), Expect = 3e-56
 Identities = 109/119 (91%), Positives = 115/119 (96%)
 Frame = -2

Query: 768 EGKEMVLKTELCRFSGAKIYPGRGIRFVRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAM 589
           E  +MVLKTELCRFSGAKIYPG+GIRF+R+DSQVFLF+NSKCKRYFHNRL+PAKLTWTAM
Sbjct: 63  EAAKMVLKTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKPAKLTWTAM 122

Query: 588 YRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKAEVRDAAREAALREI 412
           YRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKR EK EVRDAAREAALREI
Sbjct: 123 YRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 181


>ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L24 [Vitis
           vinifera]
          Length = 198

 Score =  223 bits (569), Expect = 3e-56
 Identities = 119/160 (74%), Positives = 125/160 (78%)
 Frame = -2

Query: 798 FSW*SSCGSLEGKEMVLKTELCRFSGAKIYPGRGIRFVRSDSQVFLFANSKCKRYFHNRL 619
           FS  S     +   MVLKTELCRFSGAKIYPG+GIRFVRSDSQVFLFANSKCKRYFHNRL
Sbjct: 20  FSRVSEAQQQQXAAMVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRL 79

Query: 618 RPAKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKAEVRDA 439
           +P+KLTWTAMYRKQHKKDI  EAVKKRRR TKKPYSRSIVGATLEVIQK+RTEKAEVRDA
Sbjct: 80  KPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDA 139

Query: 438 AREAALREIXXXXXXXXXXXXXXXXXXXXKSQKTQTKGSV 319
           AREAALREI                    K QKTQ KG+V
Sbjct: 140 AREAALREIKERIKKTKDEKKAKKAEVMAKVQKTQGKGNV 179


>ref|XP_002304475.1| predicted protein [Populus trichocarpa] gi|118481513|gb|ABK92699.1|
           unknown [Populus trichocarpa]
           gi|222841907|gb|EEE79454.1| predicted protein [Populus
           trichocarpa]
          Length = 163

 Score =  223 bits (568), Expect = 4e-56
 Identities = 114/144 (79%), Positives = 121/144 (84%)
 Frame = -2

Query: 756 MVLKTELCRFSGAKIYPGRGIRFVRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYRKQ 577
           MVLKTELCRFSGAKIYPG+GIRF+RSDSQVFLFANSKCKRYFHNRL+P+KLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 576 HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKAEVRDAAREAALREIXXXXX 397
           HKKDI AEAVKK+RRTTKKPYSRSIVGATLEVIQK+R EK EVRDAAREAALREI     
Sbjct: 61  HKKDIAAEAVKKKRRTTKKPYSRSIVGATLEVIQKRRAEKPEVRDAAREAALREIKERIK 120

Query: 396 XXXXXXXXXXXXXXXKSQKTQTKG 325
                          K+QKTQTKG
Sbjct: 121 KTKDEKKAKKAESMAKTQKTQTKG 144


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