BLASTX nr result

ID: Dioscorea21_contig00002247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002247
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   538   e-150
ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|2...   538   e-150
ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit al...   537   e-150
ref|XP_003548295.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   536   e-150
ref|XP_002318347.1| predicted protein [Populus trichocarpa] gi|2...   536   e-150

>ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
            mitochondrial-like [Cucumis sativus]
          Length = 342

 Score =  538 bits (1385), Expect = e-150
 Identities = 268/294 (91%), Positives = 274/294 (93%)
 Frame = +3

Query: 174  VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA 353
            VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFN+VAEAKA
Sbjct: 48   VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKA 107

Query: 354  ETKANASVIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVRVKAALNKQSKTRLIG 533
            ETKANASVIYVPPPF               VVCITEGIPQHDMVRVKAALNKQSKTRLIG
Sbjct: 108  ETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNKQSKTRLIG 167

Query: 534  PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 713
            PNCPGIIKPGECKIGIMPGYIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD
Sbjct: 168  PNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 227

Query: 714  PFNGTNFVDCITKFLEDPQTEGVVLIGEIGGTAEEDAAALIKESGTKKPIVAFIAGLTAP 893
            PFNGTNFVDCI KFL DPQTEG+VLIGEIGGTAEEDAAALIKESGT KPIV FIAGLTAP
Sbjct: 228  PFNGTNFVDCIEKFLVDPQTEGIVLIGEIGGTAEEDAAALIKESGTDKPIVGFIAGLTAP 287

Query: 894  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDSFKQKGLV 1055
            PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGV+ML+ FKQ+GLV
Sbjct: 288  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVSMLEVFKQRGLV 341


>ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|222870592|gb|EEF07723.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  538 bits (1385), Expect = e-150
 Identities = 266/295 (90%), Positives = 275/295 (93%)
 Frame = +3

Query: 174  VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA 353
            VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA
Sbjct: 36   VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA 95

Query: 354  ETKANASVIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVRVKAALNKQSKTRLIG 533
            ETKANASVIYVPPPF               VVCITEGIPQHDMVRVKAALN+Q+KTRLIG
Sbjct: 96   ETKANASVIYVPPPFAAAAILEAMEAELNLVVCITEGIPQHDMVRVKAALNRQTKTRLIG 155

Query: 534  PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 713
            PNCPGIIKPGECKIGIMP YIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD
Sbjct: 156  PNCPGIIKPGECKIGIMPAYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 215

Query: 714  PFNGTNFVDCITKFLEDPQTEGVVLIGEIGGTAEEDAAALIKESGTKKPIVAFIAGLTAP 893
            PFNGTNFVDCI KFL DPQTEG++LIGEIGGTAEEDAAALIKESGT+KP+VAFIAGLTAP
Sbjct: 216  PFNGTNFVDCIEKFLVDPQTEGIILIGEIGGTAEEDAAALIKESGTEKPVVAFIAGLTAP 275

Query: 894  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDSFKQKGLVD 1058
            PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLD FKQ+GL +
Sbjct: 276  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVFKQRGLAN 330


>ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial
            precursor, putative [Ricinus communis]
            gi|223546409|gb|EEF47910.1| Succinyl-CoA ligase
            [GDP-forming] subunit alpha-2, mitochondrial precursor,
            putative [Ricinus communis]
          Length = 334

 Score =  537 bits (1384), Expect = e-150
 Identities = 267/293 (91%), Positives = 273/293 (93%)
 Frame = +3

Query: 174  VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA 353
            VFVDKNTRVICQGITGKNGTFHTEQAIEYGT MVGGVTPKKGGTEHLGLPVFNTVAEAKA
Sbjct: 40   VFVDKNTRVICQGITGKNGTFHTEQAIEYGTTMVGGVTPKKGGTEHLGLPVFNTVAEAKA 99

Query: 354  ETKANASVIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVRVKAALNKQSKTRLIG 533
            ETKANASVIYVPPPF               VVCITEGIPQHDMVRVKAALN+QSKTRLIG
Sbjct: 100  ETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIG 159

Query: 534  PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 713
            PNCPGIIKPGECKIGIMPGYIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD
Sbjct: 160  PNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 219

Query: 714  PFNGTNFVDCITKFLEDPQTEGVVLIGEIGGTAEEDAAALIKESGTKKPIVAFIAGLTAP 893
            PFNGTNFVDCI KFL DPQTEG++LIGEIGGTAEEDAAALIKESGT KPIVAFIAGLTAP
Sbjct: 220  PFNGTNFVDCIEKFLADPQTEGIILIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAP 279

Query: 894  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDSFKQKGL 1052
            PGRRMGHAGAIVSGGKGTAQDKIKTL+EAGVTVVESPAKIGVAMLD FKQ+GL
Sbjct: 280  PGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVFKQRGL 332


>ref|XP_003548295.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
            mitochondrial-like [Glycine max]
          Length = 325

 Score =  536 bits (1382), Expect = e-150
 Identities = 265/294 (90%), Positives = 274/294 (93%)
 Frame = +3

Query: 174  VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA 353
            VFVDK+TRVICQGITGKNGTFHTEQAIEYGT MVGGVTPKKGGTEHLGLPVFNTVAEAKA
Sbjct: 31   VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAKA 90

Query: 354  ETKANASVIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVRVKAALNKQSKTRLIG 533
            ETKANASVIYVPPPF               VVCITEGIPQHDMVRVKAALN+QSKTRLIG
Sbjct: 91   ETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIG 150

Query: 534  PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 713
            PNCPGIIKPGECKIGIMPGYIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD
Sbjct: 151  PNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 210

Query: 714  PFNGTNFVDCITKFLEDPQTEGVVLIGEIGGTAEEDAAALIKESGTKKPIVAFIAGLTAP 893
            PFNGTNFVDC+ KFL DPQTEG++LIGEIGGTAEEDAAALIKESGT+KP+VAFIAGLTAP
Sbjct: 211  PFNGTNFVDCLQKFLTDPQTEGIILIGEIGGTAEEDAAALIKESGTEKPVVAFIAGLTAP 270

Query: 894  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDSFKQKGLV 1055
            PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIG AMLD FKQ+GLV
Sbjct: 271  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLDVFKQRGLV 324


>ref|XP_002318347.1| predicted protein [Populus trichocarpa] gi|222859020|gb|EEE96567.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  536 bits (1381), Expect = e-150
 Identities = 267/293 (91%), Positives = 273/293 (93%)
 Frame = +3

Query: 174  VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA 353
            VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA
Sbjct: 1    VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKA 60

Query: 354  ETKANASVIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVRVKAALNKQSKTRLIG 533
            ETKANASVIYVPPPF               VVCITEGIPQHDMVRVKAALN+QSKTRLIG
Sbjct: 61   ETKANASVIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIG 120

Query: 534  PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 713
            PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD
Sbjct: 121  PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 180

Query: 714  PFNGTNFVDCITKFLEDPQTEGVVLIGEIGGTAEEDAAALIKESGTKKPIVAFIAGLTAP 893
            PFNGTNFVDCI KFL D QTEG++LIGEIGGTAEEDAAALIKESGT+KP+VAFIAG TAP
Sbjct: 181  PFNGTNFVDCIEKFLADSQTEGIILIGEIGGTAEEDAAALIKESGTEKPVVAFIAGQTAP 240

Query: 894  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDSFKQKGL 1052
            PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLD FKQ+GL
Sbjct: 241  PGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVFKQRGL 293


Top