BLASTX nr result
ID: Dioscorea21_contig00002234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002234
(1540 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 255 3e-65
emb|CBI28530.3| unnamed protein product [Vitis vinifera] 251 3e-64
ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containi... 248 4e-63
ref|NP_001159257.1| uncharacterized protein LOC100304347 [Zea ma... 243 1e-61
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi... 234 6e-59
>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61370, mitochondrial-like [Vitis vinifera]
Length = 505
Score = 255 bits (651), Expect = 3e-65
Identities = 125/226 (55%), Positives = 166/226 (73%)
Frame = +1
Query: 1 CVCKRNLRFNPSALVPEATNLMAEMRASGVAPTTVSYNILISCLSKTRRVKEACGILQSM 180
C+C+RNL+ NPS LVPEA N+M EMR++ + PT++SYNIL+SCL +TRRVKE+C IL M
Sbjct: 255 CLCERNLKSNPSGLVPEALNVMMEMRSNRITPTSISYNILLSCLGRTRRVKESCRILDLM 314
Query: 181 IQGKGSCSCSPDWVSYYLVIKLLYLTGRFGRGNKLVEHMFEIGMVPGVKFYHDMIGVLCG 360
+ CSPDWVSYYLV ++LYLTGRFG+GN++V+ M E G+VP KFY+D+IGVLCG
Sbjct: 315 KR----LGCSPDWVSYYLVARVLYLTGRFGKGNQIVDEMIEEGLVPDRKFYYDLIGVLCG 370
Query: 361 MDKMKYALEMFDRMKQSGLVSNGALYDLLIEKLCRNGEFDMGRCLWDEAVERGIVLQSSS 540
++++ YALEMF+RMK+S L G +YD+LI KLCR+G+F GR LWDEA G++L SS
Sbjct: 371 VERVNYALEMFERMKRSSLGGYGPVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSS 430
Query: 541 DLLDPLKTEVFKPVRPLKKLDASEYKMSMLKAKGVRRARVKLKPKK 678
++LDP T+VFKP R K + + K+ K R + K K KK
Sbjct: 431 EVLDPSITKVFKPAR--KDEEKGKEKLQNQKKSSXRSQKKKKKRKK 474
>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 251 bits (642), Expect = 3e-64
Identities = 123/225 (54%), Positives = 167/225 (74%)
Frame = +1
Query: 1 CVCKRNLRFNPSALVPEATNLMAEMRASGVAPTTVSYNILISCLSKTRRVKEACGILQSM 180
C+C+RNL+ NPS LVPEA N+M EMR++ + PT++SYNIL+SCL +TRRVKE+C IL M
Sbjct: 224 CLCERNLKSNPSGLVPEALNVMMEMRSNRITPTSISYNILLSCLGRTRRVKESCRILDLM 283
Query: 181 IQGKGSCSCSPDWVSYYLVIKLLYLTGRFGRGNKLVEHMFEIGMVPGVKFYHDMIGVLCG 360
+ CSPDWVSYYLV ++LYLTGRFG+GN++V+ M E G+VP KFY+D+IGVLCG
Sbjct: 284 KR----LGCSPDWVSYYLVARVLYLTGRFGKGNQIVDEMIEEGLVPDRKFYYDLIGVLCG 339
Query: 361 MDKMKYALEMFDRMKQSGLVSNGALYDLLIEKLCRNGEFDMGRCLWDEAVERGIVLQSSS 540
++++ YALEMF+RMK+S L G +YD+LI KLCR+G+F GR LWDEA G++L SS
Sbjct: 340 VERVNYALEMFERMKRSSLGGYGPVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSS 399
Query: 541 DLLDPLKTEVFKPVRPLKKLDASEYKMSMLKAKGVRRARVKLKPK 675
++LDP T+VFKP R +++ + + + +AK VR K K
Sbjct: 400 EVLDPSITKVFKPARKDEEV-CTMSRTLVQEAKAVRNGNKNKKNK 443
>ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Glycine max]
Length = 451
Score = 248 bits (632), Expect = 4e-63
Identities = 126/234 (53%), Positives = 168/234 (71%), Gaps = 8/234 (3%)
Frame = +1
Query: 1 CVCKRNLRFNPSALVPEATNLMAEMRASGVAPTTVSYNILISCLSKTRRVKEACGILQSM 180
C+C+RNLR NPS LVPEA N+M EM++ V PT++SYNIL+SCL KTRRVKE+C IL++M
Sbjct: 222 CLCERNLRHNPSGLVPEALNVMMEMKSHNVFPTSISYNILLSCLGKTRRVKESCQILETM 281
Query: 181 -IQGKGSCSCSPDWVSYYLVIKLLYLTGRFGRGNKLVEHMFEIGMVPGVKFYHDMIGVLC 357
I G C PDWVSYYLV K+L+L+GRFG+G ++V+ M G+VP KFY+ +IG+LC
Sbjct: 282 KISG-----CDPDWVSYYLVAKVLFLSGRFGKGKEMVDQMIGKGLVPNHKFYYSLIGILC 336
Query: 358 GMDKMKYALEMFDRMKQSGLVSNGALYDLLIEKLCRNGEFDMGRCLWDEAVERGIVLQSS 537
G++++ YALE+F++MK+S + G +YD+LI KLCR G+F+ GR LWDEA GI LQ S
Sbjct: 337 GVERVNYALELFEKMKKSSMGGYGPVYDVLIPKLCRGGDFEKGRELWDEASGMGITLQCS 396
Query: 538 SDLLDPLKTEVFKPVRPLKK--LDASEYK--MSMLKAKGVRRARVK---LKPKK 678
D+LDP TEV+KP RP K +D+S K + K G + R K +K KK
Sbjct: 397 EDVLDPSITEVYKPTRPEKSSHVDSSRAKSPQKLTKFSGKMKMRKKTAAMKKKK 450
>ref|NP_001159257.1| uncharacterized protein LOC100304347 [Zea mays]
gi|223943049|gb|ACN25608.1| unknown [Zea mays]
gi|223944973|gb|ACN26570.1| unknown [Zea mays]
gi|414871380|tpg|DAA49937.1| TPA: hypothetical protein
ZEAMMB73_156182 [Zea mays] gi|414871381|tpg|DAA49938.1|
TPA: hypothetical protein ZEAMMB73_156182 [Zea mays]
Length = 499
Score = 243 bits (619), Expect = 1e-61
Identities = 121/213 (56%), Positives = 153/213 (71%)
Frame = +1
Query: 1 CVCKRNLRFNPSALVPEATNLMAEMRASGVAPTTVSYNILISCLSKTRRVKEACGILQSM 180
CVC RNL FNPSALVPEA +++ EMR GV P S+NIL+SCL + RRVKEA IL M
Sbjct: 269 CVCHRNLNFNPSALVPEAMDILTEMRTCGVPPAASSFNILLSCLGRARRVKEAYRILYLM 328
Query: 181 IQGKGSCSCSPDWVSYYLVIKLLYLTGRFGRGNKLVEHMFEIGMVPGVKFYHDMIGVLCG 360
+GK CS PDWVSYYLV+++LYLT R RG +LV+ M E G++P KF+H +IG+LCG
Sbjct: 329 REGKAGCS--PDWVSYYLVVRVLYLTRRILRGKRLVDAMLESGVLPTAKFFHGLIGILCG 386
Query: 361 MDKMKYALEMFDRMKQSGLVSNGALYDLLIEKLCRNGEFDMGRCLWDEAVERGIVLQSSS 540
+++ +AL+MF MK+ LV + +YDLLIEKLCR G F++GR LWDEA G+VL S
Sbjct: 387 TEEVDHALDMFKLMKRCELV-DARIYDLLIEKLCRIGRFEIGRELWDEATNSGLVLGCSQ 445
Query: 541 DLLDPLKTEVFKPVRPLKKLDASEYKMSMLKAK 639
DLLDPLKTEVF+P+ P ++L YK K K
Sbjct: 446 DLLDPLKTEVFRPICPAQRLSPQNYKRLAWKKK 478
>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
gi|449477571|ref|XP_004155060.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
Length = 487
Score = 234 bits (596), Expect = 6e-59
Identities = 113/226 (50%), Positives = 160/226 (70%)
Frame = +1
Query: 1 CVCKRNLRFNPSALVPEATNLMAEMRASGVAPTTVSYNILISCLSKTRRVKEACGILQSM 180
C+C++N+ NPS LVPE+ N+M EMR+ ++P ++SYNIL+SCL KTRRVKE+C IL+ M
Sbjct: 265 CLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLCKTRRVKESCKILEMM 324
Query: 181 IQGKGSCSCSPDWVSYYLVIKLLYLTGRFGRGNKLVEHMFEIGMVPGVKFYHDMIGVLCG 360
+ C PD VSYYL+ ++L+LTGRFG+G ++V+ M E G+ P KFY+D+IG+LCG
Sbjct: 325 KR----TGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRKFYYDLIGILCG 380
Query: 361 MDKMKYALEMFDRMKQSGLVSNGALYDLLIEKLCRNGEFDMGRCLWDEAVERGIVLQSSS 540
+++ YALE+F++MK+S L G +YD+LI KLCR GEF+MGR LW+EA+ G+ L SS
Sbjct: 381 VERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSS 440
Query: 541 DLLDPLKTEVFKPVRPLKKLDASEYKMSMLKAKGVRRARVKLKPKK 678
++LDP T+VFKP R ++ E+ S K + K K KK
Sbjct: 441 EILDPSITKVFKPTRKIENKIVEEFN-SAEKQNKAAAEKPKEKRKK 485