BLASTX nr result

ID: Dioscorea21_contig00002224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002224
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299870.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|ABK93253.1| unknown [Populus trichocarpa]                           57   2e-06
ref|XP_002531440.1| Protein kinase APK1A, chloroplast precursor,...    55   4e-06
ref|XP_002533148.1| Protein kinase APK1B, chloroplast precursor,...    55   4e-06

>ref|XP_002299870.1| predicted protein [Populus trichocarpa] gi|222847128|gb|EEE84675.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = +3

Query: 48  SSESRFRPTMDEVVSTLEQLQEAKDTTKSTPAQGNKDNNRKLANNGQRSRRRSSADVVNG 227
           S E++FRPTMDEVV+ +EQLQ++K+T     A G+       A+N  R RRRS+ D ++G
Sbjct: 340 SIETKFRPTMDEVVTAMEQLQDSKETGS---ANGH-------ASNAPRIRRRSADDTISG 389

Query: 228 K--AAYPRP 248
           +  AAYPRP
Sbjct: 390 RNTAAYPRP 398


>ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|222850586|gb|EEE88133.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = +3

Query: 48  SSESRFRPTMDEVVSTLEQLQEAKDTTKSTPAQGNKDNNRKLANNGQRSRRRSSADVVNG 227
           S E++FRPTMDEVV+ LEQLQ++K+T  +    GNK           R RRRS+ D   G
Sbjct: 326 SIETKFRPTMDEVVTALEQLQDSKETGTANGHVGNK----------PRIRRRSANDATGG 375

Query: 228 K--AAYPRP 248
              AAYPRP
Sbjct: 376 GSIAAYPRP 384


>gb|ABK93253.1| unknown [Populus trichocarpa]
          Length = 159

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = +3

Query: 48  SSESRFRPTMDEVVSTLEQLQEAKDTTKSTPAQGNKDNNRKLANNGQRSRRRSSADVVNG 227
           S E++FRPTMDEVV+ LEQLQ++K+T  +    GNK           R RRRS+ D   G
Sbjct: 94  SIETKFRPTMDEVVTALEQLQDSKETGTANGHVGNK----------PRIRRRSANDATGG 143

Query: 228 K--AAYPRP 248
              AAYPRP
Sbjct: 144 GSIAAYPRP 152


>ref|XP_002531440.1| Protein kinase APK1A, chloroplast precursor, putative [Ricinus
           communis] gi|223528959|gb|EEF30952.1| Protein kinase
           APK1A, chloroplast precursor, putative [Ricinus
           communis]
          Length = 336

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +3

Query: 48  SSESRFRPTMDEVVSTLEQLQEAKDTTKSTPAQGNKDNNRKLANNGQRSRRRSSADVVNG 227
           S+E +FRP MDE+V++LEQLQ++K T          ++N   +NN +R RRRS+ D  NG
Sbjct: 270 STEPKFRPNMDEIVTSLEQLQDSKGT----------ESNNTNSNNVRRIRRRSADDACNG 319

Query: 228 ---KAAYPRP 248
                 YPRP
Sbjct: 320 GRNVVTYPRP 329


>ref|XP_002533148.1| Protein kinase APK1B, chloroplast precursor, putative [Ricinus
           communis] gi|223527043|gb|EEF29229.1| Protein kinase
           APK1B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 410

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +3

Query: 48  SSESRFRPTMDEVVSTLEQLQEAKDT--TKSTPAQGNKDNNRKLANNGQRSRRRSSADVV 221
           S E RFRP M+EVV  LEQL E+ D   ++ +  +  +  NR  +NNG R  R+S+A+  
Sbjct: 335 SPEPRFRPKMEEVVKALEQLLESNDNEGSRGSRHESLRKVNRN-SNNGPRYHRKSTAETC 393

Query: 222 NGKAA-YPRP 248
           +GKAA YPRP
Sbjct: 394 DGKAASYPRP 403


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