BLASTX nr result

ID: Dioscorea21_contig00002214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002214
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14940.3| unnamed protein product [Vitis vinifera]              230   3e-58
ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255...   230   3e-58
ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloro...   225   1e-56
ref|XP_003553006.1| PREDICTED: 50S ribosomal protein L19, chloro...   225   1e-56
ref|XP_003530531.1| PREDICTED: 50S ribosomal protein L19, chloro...   225   1e-56

>emb|CBI14940.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  230 bits (587), Expect = 3e-58
 Identities = 122/167 (73%), Positives = 141/167 (84%)
 Frame = +2

Query: 254 SSNGIYQSVNSGANFLIRSMTTSVNPEISDGQDCSAASPEVHPPRIKFKRLDKTARHIMN 433
           S +G++Q   +   F  R +TT+VNP IS  QD SAA      PRIKFKRLDKT++HIM 
Sbjct: 105 SRSGLFQWTAAMPTFPSRCITTTVNP-ISASQDSSAAPVSDLAPRIKFKRLDKTSKHIMQ 163

Query: 434 ILDKEAVEKVRSQREIPAIEPGYIVQLKVEVPENKRRVSVLKGIVIATRNAGLHSTFRLR 613
           ILDKEAVE+VR++REIP I+PGYIVQLKVEVPENKRR SVLKGIVIA RNAGL++TFRLR
Sbjct: 164 ILDKEAVEEVRAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARRNAGLNTTFRLR 223

Query: 614 RLVAGVGVESVFPLYSPNIKEFKVLEKKNVRRAKLYYLRDRMNALKK 754
           RLVAGVGVES+FPLYSP+IKE KVL+KK VRRAKLYYLRD+MNAL+K
Sbjct: 224 RLVAGVGVESLFPLYSPSIKEIKVLDKKKVRRAKLYYLRDKMNALRK 270


>ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255272 [Vitis vinifera]
          Length = 243

 Score =  230 bits (587), Expect = 3e-58
 Identities = 122/167 (73%), Positives = 141/167 (84%)
 Frame = +2

Query: 254 SSNGIYQSVNSGANFLIRSMTTSVNPEISDGQDCSAASPEVHPPRIKFKRLDKTARHIMN 433
           S +G++Q   +   F  R +TT+VNP IS  QD SAA      PRIKFKRLDKT++HIM 
Sbjct: 78  SRSGLFQWTAAMPTFPSRCITTTVNP-ISASQDSSAAPVSDLAPRIKFKRLDKTSKHIMQ 136

Query: 434 ILDKEAVEKVRSQREIPAIEPGYIVQLKVEVPENKRRVSVLKGIVIATRNAGLHSTFRLR 613
           ILDKEAVE+VR++REIP I+PGYIVQLKVEVPENKRR SVLKGIVIA RNAGL++TFRLR
Sbjct: 137 ILDKEAVEEVRAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARRNAGLNTTFRLR 196

Query: 614 RLVAGVGVESVFPLYSPNIKEFKVLEKKNVRRAKLYYLRDRMNALKK 754
           RLVAGVGVES+FPLYSP+IKE KVL+KK VRRAKLYYLRD+MNAL+K
Sbjct: 197 RLVAGVGVESLFPLYSPSIKEIKVLDKKKVRRAKLYYLRDKMNALRK 243


>ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 269

 Score =  225 bits (574), Expect = 1e-56
 Identities = 128/216 (59%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
 Frame = +2

Query: 113 SLCGSGYHFSKSLICAGGQPVNHLQQISGHLNRVLGNELNFSGYKTLSSNG--IYQSVNS 286
           SLCGS   F +S   +G Q     + +S  +  V   +   S +    S+    +Q   +
Sbjct: 58  SLCGS---FLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAET 114

Query: 287 GANFLIRSMTTSVNPEISDGQDCSAASPEVHPPRIKFKRLDKTARHIMNILDKEAVEKVR 466
            A F  R + T+ + E       S A   V PPRIKFKRLDKT+RHIM ILDKEAVE+V+
Sbjct: 115 AAPFSSRGIATTSSME--SALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVK 172

Query: 467 SQREIPAIEPGYIVQLKVEVPENKRRVSVLKGIVIATRNAGLHSTFRLRRLVAGVGVESV 646
           ++REIP I+PGYIVQLKVEVPENKRR+S LKGIVIA RNAGL+STFR+RR+VAGVG+ES+
Sbjct: 173 ARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESL 232

Query: 647 FPLYSPNIKEFKVLEKKNVRRAKLYYLRDRMNALKK 754
           FPLYSPNIKE KVLEKK VRRAKLYYLRD+MNALKK
Sbjct: 233 FPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 268


>ref|XP_003553006.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Glycine
           max]
          Length = 236

 Score =  225 bits (573), Expect = 1e-56
 Identities = 120/167 (71%), Positives = 133/167 (79%), Gaps = 1/167 (0%)
 Frame = +2

Query: 254 SSNGIYQSVNSGAN-FLIRSMTTSVNPEISDGQDCSAASPEVHPPRIKFKRLDKTARHIM 430
           S  G+YQ        F  R M+T      S  QD S   PEV PPRIKFKRLDKTARHIM
Sbjct: 70  SGMGLYQPAGGLVPPFASRFMSTEATSVDSSSQDSSMLEPEV-PPRIKFKRLDKTARHIM 128

Query: 431 NILDKEAVEKVRSQREIPAIEPGYIVQLKVEVPENKRRVSVLKGIVIATRNAGLHSTFRL 610
            ILDKEAVE+VR QREIP I+PGYIVQLKVEVPENKRRVS++KGIVIA RNAGL++TFR+
Sbjct: 129 QILDKEAVEEVRGQREIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNTTFRI 188

Query: 611 RRLVAGVGVESVFPLYSPNIKEFKVLEKKNVRRAKLYYLRDRMNALK 751
           RR VAGVG+ES+FPLYSPNIKE KVL+KK VRRAKLYYLR+RMN LK
Sbjct: 189 RRQVAGVGIESLFPLYSPNIKEIKVLDKKRVRRAKLYYLRERMNPLK 235


>ref|XP_003530531.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Glycine
           max]
          Length = 231

 Score =  225 bits (573), Expect = 1e-56
 Identities = 120/167 (71%), Positives = 132/167 (79%), Gaps = 1/167 (0%)
 Frame = +2

Query: 254 SSNGIYQSVNSGAN-FLIRSMTTSVNPEISDGQDCSAASPEVHPPRIKFKRLDKTARHIM 430
           S  G+YQ        F  R M+T      S  QD S   PEV PPRIKFKRLDKTARHIM
Sbjct: 65  SGLGLYQQAGGVVPPFASRFMSTEATSVDSSSQDSSTLEPEV-PPRIKFKRLDKTARHIM 123

Query: 431 NILDKEAVEKVRSQREIPAIEPGYIVQLKVEVPENKRRVSVLKGIVIATRNAGLHSTFRL 610
            ILDKEAVE VR QREIP I+PGYIVQLKVEVPENKRRVS++KGIVIA RNAGL++TFR+
Sbjct: 124 QILDKEAVEDVRGQREIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNTTFRI 183

Query: 611 RRLVAGVGVESVFPLYSPNIKEFKVLEKKNVRRAKLYYLRDRMNALK 751
           RR VAGVG+ES+FPLYSPNIKE KVL+KK VRRAKLYYLR+RMN LK
Sbjct: 184 RRQVAGVGIESLFPLYSPNIKEIKVLDKKRVRRAKLYYLRERMNPLK 230


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