BLASTX nr result

ID: Dioscorea21_contig00002201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002201
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda...   436   e-120
ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD pre...   436   e-120
ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda...   429   e-118
ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chlor...   428   e-117

>ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|222871779|gb|EEF08910.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  437 bits (1125), Expect = e-120
 Identities = 222/264 (84%), Positives = 241/264 (91%)
 Frame = -3

Query: 1139 EGAYIPFLADLNVGDWFGGFLYSAGQQANEAVQDQLSALSFSSLAVIFGAGLVTSLSPCT 960
            E A +  LAD ++GDWFGGFLYS+GQQANEAVQDQLSALSF+SLAVIFGAGLVTSLSPCT
Sbjct: 2    EAASVYTLADGSIGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCT 61

Query: 959  LSVLPLTLGYIGAFGSGKSRAEIVADSIAFSXXXXXXXXXXXXXASFAGKAYGQVGQGLP 780
            LSVLPLTLGYIGAFGSGKSRAEIV DSIAF+             ASFAGK YGQ+GQGLP
Sbjct: 62   LSVLPLTLGYIGAFGSGKSRAEIVGDSIAFALGLATTLALLGIAASFAGKTYGQIGQGLP 121

Query: 779  LAASGLAIVMGLNLLQIIEIQLPSFFDNFDPRAAASNFPSSVQAYLAGLTFALAASPCST 600
            LAASGLA++MGLNLL++IE+QLPSFF+NFDPRAAA+NFPSSVQAYLAGLTFALAASPCST
Sbjct: 122  LAASGLAVIMGLNLLEVIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 181

Query: 599  PVLATLLGYVAASRDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPM 420
            PVLATLLGYVAAS+DPV+GGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPM
Sbjct: 182  PVLATLLGYVAASKDPVVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPM 241

Query: 419  SGALLLGGGIYTFLDKMFPAAMVM 348
            SGALLLGGG+YTFLD++FP  M M
Sbjct: 242  SGALLLGGGVYTFLDRLFPPTMAM 265


>ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2 [Vitis vinifera] gi|302143076|emb|CBI20371.3|
            unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  436 bits (1122), Expect = e-120
 Identities = 230/308 (74%), Positives = 254/308 (82%), Gaps = 1/308 (0%)
 Frame = -3

Query: 1268 SSKKGVERHGFPAKMFRVSSPVWAAGFMLHEGAANALPLNHVMEGAYIPF-LADLNVGDW 1092
            S  K  +   F  K    SS   AA F      A A  +  ++EGA   + LAD ++GDW
Sbjct: 51   SLSKTEKSGSFLIKTAATSSAFAAANFFATTDMAKAANIKDILEGATSVYTLADGSIGDW 110

Query: 1091 FGGFLYSAGQQANEAVQDQLSALSFSSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS 912
            FGGFLYSAGQQAN AVQDQLSALSF+SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS
Sbjct: 111  FGGFLYSAGQQANAAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS 170

Query: 911  GKSRAEIVADSIAFSXXXXXXXXXXXXXASFAGKAYGQVGQGLPLAASGLAIVMGLNLLQ 732
            GK RAE++ +S+AFS             ASFAGKAYGQ+GQGLPLAASGLA++MGLNLL+
Sbjct: 171  GKGRAEVIGNSVAFSLGLATTLAILGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLE 230

Query: 731  IIEIQLPSFFDNFDPRAAASNFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASRDP 552
            IIE+QLPSFF+NFDPR+AA+N PSSVQAYLAGLTFALAASPCSTPVLATLLGYVA S+DP
Sbjct: 231  IIELQLPSFFNNFDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP 290

Query: 551  VIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGIYTFLDK 372
            VIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP SGALLLGGGIYT LD+
Sbjct: 291  VIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPTSGALLLGGGIYTLLDR 350

Query: 371  MFPAAMVM 348
            +FP +MVM
Sbjct: 351  LFPTSMVM 358


>ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD precursor, putative [Ricinus
            communis] gi|223529374|gb|EEF31339.1| Thiol:disulfide
            interchange protein dsbD precursor, putative [Ricinus
            communis]
          Length = 350

 Score =  436 bits (1122), Expect = e-120
 Identities = 226/286 (79%), Positives = 252/286 (88%), Gaps = 2/286 (0%)
 Frame = -3

Query: 1199 AAGFMLHEGAANALPLNHVMEGA--YIPFLADLNVGDWFGGFLYSAGQQANEAVQDQLSA 1026
            A   +++  AA A+  + ++E A  Y+  LAD  +GDW G  LYSAGQQANEAVQDQLSA
Sbjct: 65   AVSNLINIDAAKAVSTDKLLEEATIYMYTLADGGIGDWLGRLLYSAGQQANEAVQDQLSA 124

Query: 1025 LSFSSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEIVADSIAFSXXXXXXX 846
            LSF+SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAE+VADSIAF+       
Sbjct: 125  LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVADSIAFALGLATTL 184

Query: 845  XXXXXXASFAGKAYGQVGQGLPLAASGLAIVMGLNLLQIIEIQLPSFFDNFDPRAAASNF 666
                  ASFAGKAYGQ+GQGLPLAASGLA++MGLNLL+IIE+QLPSFF+NFDPRAAA+NF
Sbjct: 185  ALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRAAAANF 244

Query: 665  PSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASRDPVIGGSLLLTYTTGYVAPLLLAA 486
            PSSVQAYLAGLTFALAASPCSTPVLATLLGYVAAS+DP++GGSLLLTYTTGYVAPLLLAA
Sbjct: 245  PSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPIVGGSLLLTYTTGYVAPLLLAA 304

Query: 485  SFAGALQSLLSFRKFSAWINPMSGALLLGGGIYTFLDKMFPAAMVM 348
            SFAGALQSLLSFRKFSAWINPMSGALLLGGG+YTFLD++FP +M M
Sbjct: 305  SFAGALQSLLSFRKFSAWINPMSGALLLGGGVYTFLDRLFPVSMSM 350


>ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2-like [Cucumis sativus]
            gi|449528927|ref|XP_004171453.1| PREDICTED: cytochrome
            c-type biogenesis ccda-like chloroplastic protein 2-like
            [Cucumis sativus]
          Length = 362

 Score =  429 bits (1103), Expect = e-118
 Identities = 220/276 (79%), Positives = 243/276 (88%), Gaps = 1/276 (0%)
 Frame = -3

Query: 1172 AANALPLNHVMEGAYIPF-LADLNVGDWFGGFLYSAGQQANEAVQDQLSALSFSSLAVIF 996
            AA A  L H+ EGA   + LAD  +GDWFGG LYSAGQQAN AVQDQLSALSF+SLAVIF
Sbjct: 87   AAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIF 146

Query: 995  GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEIVADSIAFSXXXXXXXXXXXXXASFA 816
            GAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+AE+V +S+AFS             ASFA
Sbjct: 147  GAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFA 206

Query: 815  GKAYGQVGQGLPLAASGLAIVMGLNLLQIIEIQLPSFFDNFDPRAAASNFPSSVQAYLAG 636
            GKAYGQ+GQGLPLAASGLA++MGLNLL+IIE+QLPSFF+NFDPR+AA+NFPSSVQAYLAG
Sbjct: 207  GKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAG 266

Query: 635  LTFALAASPCSTPVLATLLGYVAASRDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLL 456
            LTFALAASPCSTPVLATLLGYVA S+DP+IGGSLLLTYTTGYV PLLLAASFAGALQSLL
Sbjct: 267  LTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLL 326

Query: 455  SFRKFSAWINPMSGALLLGGGIYTFLDKMFPAAMVM 348
            SFRKFS+WINP+SGALLLGGG+YTFLD++FP  M M
Sbjct: 327  SFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 362


>ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like
            [Glycine max] gi|32402380|gb|AAP81162.1| c-type
            cytochrome biogenesis protein [Glycine max]
            gi|255636862|gb|ACU18764.1| unknown [Glycine max]
          Length = 344

 Score =  428 bits (1101), Expect = e-117
 Identities = 219/262 (83%), Positives = 240/262 (91%)
 Frame = -3

Query: 1133 AYIPFLADLNVGDWFGGFLYSAGQQANEAVQDQLSALSFSSLAVIFGAGLVTSLSPCTLS 954
            A I  LAD ++ DWFGGFLYSAGQQANEAVQ QL++LSF+SLAVI+GAGLVTSLSPCTLS
Sbjct: 83   ASIYALADGSLNDWFGGFLYSAGQQANEAVQGQLTSLSFTSLAVIYGAGLVTSLSPCTLS 142

Query: 953  VLPLTLGYIGAFGSGKSRAEIVADSIAFSXXXXXXXXXXXXXASFAGKAYGQVGQGLPLA 774
            VLPLTLGYIGAFGSGKSRAE+V DSIAFS             ASFAGKAYGQ+GQGLPLA
Sbjct: 143  VLPLTLGYIGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLA 202

Query: 773  ASGLAIVMGLNLLQIIEIQLPSFFDNFDPRAAASNFPSSVQAYLAGLTFALAASPCSTPV 594
            ASGLAI+MGLNLL+IIE++LPSFFD+FDPRAAA+NFPSSVQAYLAGLTFALAASPCSTPV
Sbjct: 203  ASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPV 262

Query: 593  LATLLGYVAASRDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSG 414
            LATLLGYVAAS+DPVIGGSLLLTYTTGYV+PLLLAASFAGALQSLLSFRKFSAWINP+SG
Sbjct: 263  LATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISG 322

Query: 413  ALLLGGGIYTFLDKMFPAAMVM 348
            A+LLGGG+YTFLD++FP  MVM
Sbjct: 323  AMLLGGGVYTFLDRLFPVTMVM 344


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