BLASTX nr result

ID: Dioscorea21_contig00002189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002189
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC71698.1| hypothetical protein OsI_04199 [Oryza sativa Indi...   127   7e-28
ref|NP_001044615.1| Os01g0815800 [Oryza sativa Japonica Group] g...   127   7e-28
gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indi...   127   9e-28
gb|ACF06627.1| 60S ribosomal protein L24 [Elaeis guineensis]          127   1e-27
dbj|BAC06922.1| putative 60S ribosomal protein L24 [Oryza sativa...   126   2e-27

>gb|EEC71698.1| hypothetical protein OsI_04199 [Oryza sativa Indica Group]
          Length = 1058

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/76 (84%), Positives = 66/76 (86%)
 Frame = +1

Query: 1    RYFHNRLRPAKLTWTAMYRKQHKKDIHAEAVXXXXXXXXXPYSRSIVGATLEVIQKKRTE 180
            RYFHNRL+PAKLTWTAMYRKQHKKDIHAEAV         PYSRSIVGATLEVIQKKR+E
Sbjct: 936  RYFHNRLKPAKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSE 995

Query: 181  KAEVRDAAREAALREI 228
            K EVRDAAREAALREI
Sbjct: 996  KPEVRDAAREAALREI 1011


>ref|NP_001044615.1| Os01g0815800 [Oryza sativa Japonica Group] gi|315113263|pdb|3IZR|Z
           Chain Z, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|56785063|dbj|BAD82702.1|
           putative 60S ribosomal protein L24 [Oryza sativa
           Japonica Group] gi|113534146|dbj|BAF06529.1|
           Os01g0815800 [Oryza sativa Japonica Group]
           gi|215678861|dbj|BAG95298.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765056|dbj|BAG86753.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222619445|gb|EEE55577.1| hypothetical protein
           OsJ_03860 [Oryza sativa Japonica Group]
          Length = 162

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/76 (84%), Positives = 66/76 (86%)
 Frame = +1

Query: 1   RYFHNRLRPAKLTWTAMYRKQHKKDIHAEAVXXXXXXXXXPYSRSIVGATLEVIQKKRTE 180
           RYFHNRL+PAKLTWTAMYRKQHKKDIHAEAV         PYSRSIVGATLEVIQKKR+E
Sbjct: 40  RYFHNRLKPAKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSE 99

Query: 181 KAEVRDAAREAALREI 228
           K EVRDAAREAALREI
Sbjct: 100 KPEVRDAAREAALREI 115


>gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indica Group]
          Length = 227

 Score =  127 bits (319), Expect = 9e-28
 Identities = 64/76 (84%), Positives = 65/76 (85%)
 Frame = +1

Query: 1   RYFHNRLRPAKLTWTAMYRKQHKKDIHAEAVXXXXXXXXXPYSRSIVGATLEVIQKKRTE 180
           RYFHNRL+PAKLTWTAMYRKQHKKDIHAEAV         PYSRSIVGATLEVIQKKR E
Sbjct: 106 RYFHNRLKPAKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAE 165

Query: 181 KAEVRDAAREAALREI 228
           K EVRDAAREAALREI
Sbjct: 166 KPEVRDAAREAALREI 181


>gb|ACF06627.1| 60S ribosomal protein L24 [Elaeis guineensis]
          Length = 163

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/76 (82%), Positives = 66/76 (86%)
 Frame = +1

Query: 1   RYFHNRLRPAKLTWTAMYRKQHKKDIHAEAVXXXXXXXXXPYSRSIVGATLEVIQKKRTE 180
           RYFHNRL+P+KLTWTAMYRKQHKKDIHAEAV         PYSRSIVGATLEVIQK+RTE
Sbjct: 40  RYFHNRLKPSKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTE 99

Query: 181 KAEVRDAAREAALREI 228
           K EVRDAAREAALREI
Sbjct: 100 KPEVRDAAREAALREI 115


>dbj|BAC06922.1| putative 60S ribosomal protein L24 [Oryza sativa Japonica Group]
           gi|50510087|dbj|BAD30738.1| putative 60S ribosomal
           protein L24 [Oryza sativa Japonica Group]
          Length = 160

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/76 (82%), Positives = 65/76 (85%)
 Frame = +1

Query: 1   RYFHNRLRPAKLTWTAMYRKQHKKDIHAEAVXXXXXXXXXPYSRSIVGATLEVIQKKRTE 180
           RYFHNRL+PAKLTWTAMYRKQHKKDIHAEAV         PYSRSIVGATLEVIQKKR E
Sbjct: 39  RYFHNRLKPAKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAE 98

Query: 181 KAEVRDAAREAALREI 228
           K EVRDAARE+ALREI
Sbjct: 99  KPEVRDAARESALREI 114


Top