BLASTX nr result

ID: Dioscorea21_contig00002186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002186
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP23944.1| leucine-rich repeat protein [x Citrofortunella mi...   166   2e-39
ref|XP_002530200.1| serine-threonine protein kinase, plant-type,...   165   3e-39
ref|XP_002314247.1| predicted protein [Populus trichocarpa] gi|1...   164   7e-39
ref|XP_004144110.1| PREDICTED: somatic embryogenesis receptor ki...   162   3e-38
ref|NP_197608.1| leucine-rich repeat-containing protein [Arabido...   162   3e-38

>gb|AAP23944.1| leucine-rich repeat protein [x Citrofortunella microcarpa]
          Length = 228

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/84 (92%), Positives = 80/84 (95%)
 Frame = +3

Query: 198 SPNSEGDALYAFRRSLSDPENVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSYLSGH 377
           S NSEGDALYA RRSLSDP+ VLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNS LSGH
Sbjct: 36  SGNSEGDALYALRRSLSDPDYVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGH 95

Query: 378 LVPELGKLEHLQYLELYKNNIKGT 449
           LVPELGKLEHLQYLELYKNNI+GT
Sbjct: 96  LVPELGKLEHLQYLELYKNNIQGT 119


>ref|XP_002530200.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223530293|gb|EEF32190.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 223

 Score =  165 bits (418), Expect = 3e-39
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +3

Query: 204 NSEGDALYAFRRSLSDPENVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSYLSGHLV 383
           NSEGDALY  RRSLSDP+NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNS LSGHLV
Sbjct: 33  NSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGHLV 92

Query: 384 PELGKLEHLQYLELYKNNIKGT 449
           PELGKLEHLQYLELYKNNI+G+
Sbjct: 93  PELGKLEHLQYLELYKNNIQGS 114


>ref|XP_002314247.1| predicted protein [Populus trichocarpa] gi|118487907|gb|ABK95775.1|
           unknown [Populus trichocarpa]
           gi|222850655|gb|EEE88202.1| predicted protein [Populus
           trichocarpa]
          Length = 215

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = +3

Query: 204 NSEGDALYAFRRSLSDPENVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSYLSGHLV 383
           NSEGDAL+  R+SLSDP+NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNS LSGHLV
Sbjct: 25  NSEGDALFTLRKSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGHLV 84

Query: 384 PELGKLEHLQYLELYKNNIKGT 449
           PELGKLEHLQYLELYKNNI+GT
Sbjct: 85  PELGKLEHLQYLELYKNNIQGT 106


>ref|XP_004144110.1| PREDICTED: somatic embryogenesis receptor kinase 1-like [Cucumis
           sativus] gi|449530873|ref|XP_004172416.1| PREDICTED:
           somatic embryogenesis receptor kinase 1-like [Cucumis
           sativus]
          Length = 220

 Score =  162 bits (410), Expect = 3e-38
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = +3

Query: 204 NSEGDALYAFRRSLSDPENVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSYLSGHLV 383
           NSEGDALY  RRS SDP+NVLQSWDPTLVNPCTWFHITCNQDNRVTR+DLGNS LSGHLV
Sbjct: 30  NSEGDALYTLRRSFSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGNSNLSGHLV 89

Query: 384 PELGKLEHLQYLELYKNNIKGT 449
           PELG+LEHLQYLELYKNNI GT
Sbjct: 90  PELGRLEHLQYLELYKNNIHGT 111


>ref|NP_197608.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
           gi|11762126|gb|AAG40341.1|AF324989_1 AT5g21090
           [Arabidopsis thaliana]
           gi|13899097|gb|AAK48970.1|AF370543_1 Unknown protein
           [Arabidopsis thaliana] gi|20148427|gb|AAM10104.1|
           unknown protein [Arabidopsis thaliana]
           gi|27311823|gb|AAO00877.1| Unknown protein [Arabidopsis
           thaliana] gi|29294060|gb|AAO73897.1| leucine rich repeat
           protein (LRP), putative [Arabidopsis thaliana]
           gi|30023686|gb|AAP13376.1| At5g21090 [Arabidopsis
           thaliana] gi|222424256|dbj|BAH20085.1| AT5G21090
           [Arabidopsis thaliana] gi|332005547|gb|AED92930.1|
           leucine-rich repeat-containing protein [Arabidopsis
           thaliana]
          Length = 218

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/82 (89%), Positives = 79/82 (96%)
 Frame = +3

Query: 204 NSEGDALYAFRRSLSDPENVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSYLSGHLV 383
           NSEGDALYA RRSL+DP++VLQSWDPTLVNPCTWFH+TCNQDNRVTR+DLGNS LSGHL 
Sbjct: 28  NSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTWFHVTCNQDNRVTRVDLGNSNLSGHLA 87

Query: 384 PELGKLEHLQYLELYKNNIKGT 449
           PELGKLEHLQYLELYKNNI+GT
Sbjct: 88  PELGKLEHLQYLELYKNNIQGT 109


Top