BLASTX nr result

ID: Dioscorea21_contig00002183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002183
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ88705.1| predicted protein [Hordeum vulgare subsp. vulgare]    235   2e-59
ref|XP_003558787.1| PREDICTED: 4-coumarate--CoA ligase-like 1-li...   231   2e-58
tpg|DAA43421.1| TPA: LOW QUALITY PROTEIN: putative AMP-dependent...   230   5e-58
tpg|DAA43419.1| TPA: putative AMP-dependent synthetase and ligas...   230   5e-58
gb|ACG28731.1| 4-coumarate--CoA ligase 2 [Zea mays]                   230   5e-58

>dbj|BAJ88705.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 574

 Score =  235 bits (599), Expect = 2e-59
 Identities = 117/197 (59%), Positives = 150/197 (76%), Gaps = 1/197 (0%)
 Frame = -3

Query: 590 VVITVPDLWPKVQHLRLPTIFLSPPIPSFDSGSIPITFFSDLIS-YDGSEFIPPSVRQTD 414
           +V+TV +L PKV  L LP I L     +  S +  +T +SDL+S  D S++  P  +Q D
Sbjct: 161 LVVTVAELLPKVAALGLPVILLDDAASATPSATANVTLYSDLVSGADESQYRRPPTKQGD 220

Query: 413 VAALLYSSGTTGANKGVILTHRNFICTAMMASQDQDLLGDPPNVFLCFLPLFHIFGLSVI 234
            A LLYSSGTTG +KGV+LTHRNFI  A M + DQD  G+PPNVFLCFLP+FHIFGLSVI
Sbjct: 221 TAGLLYSSGTTGESKGVVLTHRNFIAAATMVTSDQDERGEPPNVFLCFLPMFHIFGLSVI 280

Query: 233 TYAQMSRGNSVVVMKRFEMEMVLKSIERFKVTHMYVVPPVMIALAKQGKSTKYDLSSLRF 54
           T+AQ+ RGN+VVVM  F M+ V++++++ +VTH++ VPPVMIALAK G+  KYDLSSL+F
Sbjct: 281 TFAQLQRGNAVVVMSGFAMDSVMRAVQQHRVTHVFCVPPVMIALAKHGRVGKYDLSSLKF 340

Query: 53  LGSGAAPLGKDVMEEVA 3
           +GSGAAPLG+DVME VA
Sbjct: 341 IGSGAAPLGRDVMEVVA 357


>ref|XP_003558787.1| PREDICTED: 4-coumarate--CoA ligase-like 1-like [Brachypodium
           distachyon]
          Length = 545

 Score =  231 bits (590), Expect = 2e-58
 Identities = 118/197 (59%), Positives = 148/197 (75%), Gaps = 1/197 (0%)
 Frame = -3

Query: 590 VVITVPDLWPKVQHLRLPTIFLSPPIPSFDSGSIPITFFSDLIS-YDGSEFIPPSVRQTD 414
           +VITV +L PKV  LRLP I L        S +   T +SDL+S  D +++  P  +Q+D
Sbjct: 135 LVITVAELLPKVADLRLPVILLDDTAAKSGSSA---TLYSDLVSGVDEADYRRPPTKQSD 191

Query: 413 VAALLYSSGTTGANKGVILTHRNFICTAMMASQDQDLLGDPPNVFLCFLPLFHIFGLSVI 234
            A LLYSSGTTG +KGV+LTHRNFI  A M + DQD  G+ PNVFLCFLP+FHIFGLSVI
Sbjct: 192 TAGLLYSSGTTGESKGVVLTHRNFIAAATMVTSDQDDRGEGPNVFLCFLPMFHIFGLSVI 251

Query: 233 TYAQMSRGNSVVVMKRFEMEMVLKSIERFKVTHMYVVPPVMIALAKQGKSTKYDLSSLRF 54
           TY Q+ RGN+VVVM  F ++ V+ ++++ +VTH++ VPPVMIALAK GK+ KYDLSSL+F
Sbjct: 252 TYGQLQRGNTVVVMSGFALDTVMSAVQQHRVTHLFCVPPVMIALAKHGKAGKYDLSSLKF 311

Query: 53  LGSGAAPLGKDVMEEVA 3
           +GSGAAPLGKDVME VA
Sbjct: 312 IGSGAAPLGKDVMEAVA 328


>tpg|DAA43421.1| TPA: LOW QUALITY PROTEIN: putative AMP-dependent synthetase and
           ligase superfamily protein [Zea mays]
          Length = 420

 Score =  230 bits (587), Expect = 5e-58
 Identities = 123/205 (60%), Positives = 151/205 (73%), Gaps = 9/205 (4%)
 Frame = -3

Query: 590 VVITVPDLWPKVQHLRLPTIFL--------SPPIPSFDSGSIPITFFSDLIS-YDGSEFI 438
           + ITV +L PK+  L  PTI L        +    S   G+  +T +SDL+S    +E+ 
Sbjct: 135 LAITVSELLPKIVDLGFPTILLDGGGDGDAASAAASKPQGA-SVTLYSDLVSGARETEYR 193

Query: 437 PPSVRQTDVAALLYSSGTTGANKGVILTHRNFICTAMMASQDQDLLGDPPNVFLCFLPLF 258
            P  +Q+D  AL+YSSGTTGA+KGVILTHRNFI  A M + DQD LG+ PNVFLCFLP+F
Sbjct: 194 RPPTKQSDTTALMYSSGTTGASKGVILTHRNFISAAAMMTADQDALGEGPNVFLCFLPMF 253

Query: 257 HIFGLSVITYAQMSRGNSVVVMKRFEMEMVLKSIERFKVTHMYVVPPVMIALAKQGKSTK 78
           HIFGLSVIT+AQM RGNSVVVM RF+M+ V+ +++R +VTH++ VPPVMIALAK G   K
Sbjct: 254 HIFGLSVITFAQMQRGNSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMIALAKLGSVGK 313

Query: 77  YDLSSLRFLGSGAAPLGKDVMEEVA 3
           YDLSSLRF+GSGAAPLGKDVME VA
Sbjct: 314 YDLSSLRFIGSGAAPLGKDVMEGVA 338


>tpg|DAA43419.1| TPA: putative AMP-dependent synthetase and ligase superfamily
           protein isoform 1 [Zea mays]
           gi|414864863|tpg|DAA43420.1| TPA: putative AMP-dependent
           synthetase and ligase superfamily protein isoform 2 [Zea
           mays]
          Length = 555

 Score =  230 bits (587), Expect = 5e-58
 Identities = 123/205 (60%), Positives = 151/205 (73%), Gaps = 9/205 (4%)
 Frame = -3

Query: 590 VVITVPDLWPKVQHLRLPTIFL--------SPPIPSFDSGSIPITFFSDLIS-YDGSEFI 438
           + ITV +L PK+  L  PTI L        +    S   G+  +T +SDL+S    +E+ 
Sbjct: 135 LAITVSELLPKIVDLGFPTILLDGGGDGDAASAAASKPQGA-SVTLYSDLVSGARETEYR 193

Query: 437 PPSVRQTDVAALLYSSGTTGANKGVILTHRNFICTAMMASQDQDLLGDPPNVFLCFLPLF 258
            P  +Q+D  AL+YSSGTTGA+KGVILTHRNFI  A M + DQD LG+ PNVFLCFLP+F
Sbjct: 194 RPPTKQSDTTALMYSSGTTGASKGVILTHRNFISAAAMMTADQDALGEGPNVFLCFLPMF 253

Query: 257 HIFGLSVITYAQMSRGNSVVVMKRFEMEMVLKSIERFKVTHMYVVPPVMIALAKQGKSTK 78
           HIFGLSVIT+AQM RGNSVVVM RF+M+ V+ +++R +VTH++ VPPVMIALAK G   K
Sbjct: 254 HIFGLSVITFAQMQRGNSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMIALAKLGSVGK 313

Query: 77  YDLSSLRFLGSGAAPLGKDVMEEVA 3
           YDLSSLRF+GSGAAPLGKDVME VA
Sbjct: 314 YDLSSLRFIGSGAAPLGKDVMEGVA 338


>gb|ACG28731.1| 4-coumarate--CoA ligase 2 [Zea mays]
          Length = 520

 Score =  230 bits (587), Expect = 5e-58
 Identities = 123/205 (60%), Positives = 151/205 (73%), Gaps = 9/205 (4%)
 Frame = -3

Query: 590 VVITVPDLWPKVQHLRLPTIFL--------SPPIPSFDSGSIPITFFSDLIS-YDGSEFI 438
           + ITV +L PK+  L  PTI L        +    S   G+  +T +SDL+S    +E+ 
Sbjct: 100 LAITVSELLPKIVDLGFPTILLDGGGDGDAASAAASKPQGA-SVTLYSDLVSGARETEYR 158

Query: 437 PPSVRQTDVAALLYSSGTTGANKGVILTHRNFICTAMMASQDQDLLGDPPNVFLCFLPLF 258
            P  +Q+D  AL+YSSGTTGA+KGVILTHRNFI  A M + DQD LG+ PNVFLCFLP+F
Sbjct: 159 RPPTKQSDTTALMYSSGTTGASKGVILTHRNFISAAAMMTADQDALGEGPNVFLCFLPMF 218

Query: 257 HIFGLSVITYAQMSRGNSVVVMKRFEMEMVLKSIERFKVTHMYVVPPVMIALAKQGKSTK 78
           HIFGLSVIT+AQM RGNSVVVM RF+M+ V+ +++R +VTH++ VPPVMIALAK G   K
Sbjct: 219 HIFGLSVITFAQMQRGNSVVVMSRFDMDSVMAAVQRHRVTHLFCVPPVMIALAKLGSVGK 278

Query: 77  YDLSSLRFLGSGAAPLGKDVMEEVA 3
           YDLSSLRF+GSGAAPLGKDVME VA
Sbjct: 279 YDLSSLRFIGSGAAPLGKDVMEGVA 303


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