BLASTX nr result

ID: Dioscorea21_contig00002169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002169
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568590.1| PREDICTED: uncharacterized protein LOC100825...    94   7e-17
ref|XP_002440990.1| hypothetical protein SORBIDRAFT_09g018480 [S...    89   2e-15
ref|XP_002459060.1| hypothetical protein SORBIDRAFT_03g045205 [S...    89   2e-15
ref|NP_001045324.1| Os01g0935900 [Oryza sativa Japonica Group] g...    88   5e-15
gb|AAK97388.1|AF364304_1 succinate dehydrogenase subunit 4 [Oryz...    87   7e-15

>ref|XP_003568590.1| PREDICTED: uncharacterized protein LOC100825203 isoform 2
           [Brachypodium distachyon]
          Length = 219

 Score = 94.0 bits (232), Expect = 7e-17
 Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
 Frame = -1

Query: 812 QVSPRWFS-MKASSDPDQSTEKNTSDTTLHQK--------TSKVVSFAPLEASVSXXXXX 660
           Q SPRWFS +  S  P Q T+  TS T  H          + KVV+F+PLEA+++     
Sbjct: 70  QFSPRWFSTIVPSGSPMQKTQVRTSQTVEHSDALKATEGTSPKVVAFSPLEAAIAKPRSS 129

Query: 659 XXXXXXXXXXXXXXXXXXXXXXXXXXXELSQKITYALIPAXXXXXXXXXXXXLIILSVFW 480
                                      E++ ++T+ +IPA            L++ +V+ 
Sbjct: 130 PLTSESSKVSRS---------------EIATQVTFYMIPALLLASKNSISTSLMVGAVYH 174

Query: 479 QIHGFFKEIFLDYVHQEVTRKWVLIYFKLLLLIVAKDLFLAF 354
           QI+ F KEIFLDYVH ++TRKW LIYFKLLLL++AKD  + F
Sbjct: 175 QIYMFHKEIFLDYVHHDITRKWALIYFKLLLLVMAKDTIVYF 216


>ref|XP_002440990.1| hypothetical protein SORBIDRAFT_09g018480 [Sorghum bicolor]
           gi|241946275|gb|EES19420.1| hypothetical protein
           SORBIDRAFT_09g018480 [Sorghum bicolor]
          Length = 207

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
 Frame = -1

Query: 812 QVSPRWFSMKASSDPD-QSTEKNTSDTTLHQKTSKVVSFAPLEASVSXXXXXXXXXXXXX 636
           QV PRWFS  AS+    Q ++ + +  +  + T KV++F+PLEA+++             
Sbjct: 66  QVLPRWFSSLASNGSQMQKSQISETYKSSEEATPKVMAFSPLEAAIAKPRSSPLTSESSK 125

Query: 635 XXXXXXXXXXXXXXXXXXXELSQKITYALIPAXXXXXXXXXXXXLIILSVFWQIHGFFKE 456
                              E++ KIT+ +IPA            L++ +VF Q++ F KE
Sbjct: 126 VRRS---------------EMASKITFYMIPAMLLVSKNSISTSLMVGAVFHQVYMFHKE 170

Query: 455 IFLDYVHQEVTRKWVLIYFKLLLLIVAKDLFLAF 354
           I LDYVH ++TRKW LIY KLLLL++AKD  + F
Sbjct: 171 ILLDYVHHDITRKWALIYLKLLLLVMAKDTIMYF 204


>ref|XP_002459060.1| hypothetical protein SORBIDRAFT_03g045205 [Sorghum bicolor]
           gi|241931035|gb|EES04180.1| hypothetical protein
           SORBIDRAFT_03g045205 [Sorghum bicolor]
          Length = 208

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 59/160 (36%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
 Frame = -1

Query: 818 SMQVSPRWFSMKASS----------DPDQSTEKNTSDTTLHQKTSKVVSFAPLEASVSXX 669
           S QV PRWFS  AS+          D  QS E  T ++     ++KV +F+PLEA+++  
Sbjct: 60  STQVFPRWFSAGASNGSSVQQMQIADTAQSDELKTQESA----STKVTAFSPLEATITKP 115

Query: 668 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSQKITYALIPAXXXXXXXXXXXXLIILS 489
                                         EL++  TY +IPA            L+++ 
Sbjct: 116 RRSPLTYESLKVRVT---------------ELARGATYVMIPALLFTSKNTITTSLLVMP 160

Query: 488 VFWQIHGFFKEIFLDYVHQEVTRKWVLIYFKLLLLIVAKD 369
           VF QI+ F KEI LDYVH +VTRKW LIYFK+LLLI++KD
Sbjct: 161 VFHQIYMFHKEILLDYVHHDVTRKWALIYFKILLLIMSKD 200


>ref|NP_001045324.1| Os01g0935900 [Oryza sativa Japonica Group]
            gi|15408805|dbj|BAB64201.1| putative succinate
            dehydrogenase subunit 4 [Oryza sativa Japonica Group]
            gi|113534855|dbj|BAF07238.1| Os01g0935900 [Oryza sativa
            Japonica Group] gi|218189688|gb|EEC72115.1| hypothetical
            protein OsI_05099 [Oryza sativa Indica Group]
          Length = 211

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 85/274 (31%), Positives = 109/274 (39%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1172 MASRLLRQRATPFALGSTFSRFLHPSSPPIDPCPAVASNGLRSLHSLTSPGDGGVFHPSD 993
            MASRLL   A   AL    SR     +    P PA     LR+L SL          P D
Sbjct: 1    MASRLL---ARSKALALALSR-----ADAAAPGPAAGVQWLRTLSSL----------PRD 42

Query: 992  PRSVA-PRSVLRPDFSGSFSSLANGTRFVPSSAAGSLGLMKVWNHGISNASHSYIPSYPS 816
            P + A P    R    GS                  LGL K+         +        
Sbjct: 43   PAAAASPAPAPRQPAVGS-----------------PLGLSKI-------PGYEQTSRLSG 78

Query: 815  MQVSPRWFSMKASSDPDQSTEKNTSDTTLHQKTSKVVSFAPLEASVSXXXXXXXXXXXXX 636
             QV PRWFS   S         N S       T KV++F+PLEAS++             
Sbjct: 79   TQVLPRWFSTGTS---------NGSSAQQEGATRKVMAFSPLEASIAKPRKGPLTSESWK 129

Query: 635  XXXXXXXXXXXXXXXXXXXELSQKITYALIPAXXXXXXXXXXXXLIILSVFWQIHGFFKE 456
                               EL  + TY +IP             L++ SVF Q++ F+KE
Sbjct: 130  VKQT---------------ELLTRSTYYMIPTLLLVSKNSISTSLLVASVFHQVYMFYKE 174

Query: 455  IFLDYVHQEVTRKWVLIYFKLLLLIVAKDLFLAF 354
            I LDYVH ++TRKWV IYFK+LL+I+AK+  + F
Sbjct: 175  ILLDYVHHDITRKWVFIYFKILLIIMAKETVVYF 208


>gb|AAK97388.1|AF364304_1 succinate dehydrogenase subunit 4 [Oryza sativa]
          Length = 226

 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 87/280 (31%), Positives = 113/280 (40%), Gaps = 7/280 (2%)
 Frame = -1

Query: 1172 MASRLLRQRATPFALGSTFSRFLHPSSPPIDPCPAVASNGLRSLHSLTSPGDGGVFHPSD 993
            MASRLL   A   AL    SR     +    P PA     LR+L SL          P D
Sbjct: 1    MASRLL---ARSKALALALSR-----ADAAAPGPAAGVQWLRTLSSL----------PRD 42

Query: 992  PRSVA-PRSVLRPDFSGSFSSLANGTRFVPSSAAGSLGLMKVWNHGISNASHSYIPSYPS 816
            P + A P    R    GS                  LGL K+         +        
Sbjct: 43   PAAAASPAPAPRQPAVGS-----------------PLGLSKI-------PGYEQTSRLSG 78

Query: 815  MQVSPRWFSMKASSDPDQSTEKN----TSDTTLHQK--TSKVVSFAPLEASVSXXXXXXX 654
             QV PRWFS   S+        N     SD    Q+  T KV++F+PLEAS++       
Sbjct: 79   TQVLPRWFSTGTSNGSSAQQVHNYWVTQSDALNTQEGATRKVMAFSPLEASIAKPRKGPL 138

Query: 653  XXXXXXXXXXXXXXXXXXXXXXXXXELSQKITYALIPAXXXXXXXXXXXXLIILSVFWQI 474
                                     EL  + TY +IP             L++ SVF Q+
Sbjct: 139  TSESWKVKQT---------------ELLTRSTYYMIPTLLLVSKNSISTSLLVASVFHQV 183

Query: 473  HGFFKEIFLDYVHQEVTRKWVLIYFKLLLLIVAKDLFLAF 354
            + F+KEI LDYVH ++TRKWV IYFK+LL+I+AK+  + F
Sbjct: 184  YMFYKEILLDYVHHDITRKWVFIYFKILLIIMAKETVVYF 223


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