BLASTX nr result

ID: Dioscorea21_contig00002152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002152
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c...   206   3e-51
ref|XP_002518855.1| structural constituent of ribosome, putative...   202   4e-50
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin...   201   5e-50
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin...   201   5e-50
ref|XP_002297965.1| predicted protein [Populus trichocarpa] gi|2...   201   9e-50

>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
           vinifera]
          Length = 199

 Score =  206 bits (523), Expect = 3e-51
 Identities = 105/133 (78%), Positives = 112/133 (84%)
 Frame = -1

Query: 399 SVRSQTLDFSGSFFEGGRXXXXXXXXXXXXXXXXXALEDKEEPQCPPGLRQYETMAVLRP 220
           S+R+ TLDFSGSFFEGG                  A+EDK+EPQCPPGLRQYETMAVLRP
Sbjct: 47  SIRALTLDFSGSFFEGG--FGSDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETMAVLRP 104

Query: 219 DMTEDERLAFTQRYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLF 40
           DM+EDERLA TQ+YEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLF
Sbjct: 105 DMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLF 164

Query: 39  TYFTKPESLSVLE 1
           TYFTKPES+ VLE
Sbjct: 165 TYFTKPESMEVLE 177


>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223541842|gb|EEF43388.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 205

 Score =  202 bits (513), Expect = 4e-50
 Identities = 102/136 (75%), Positives = 112/136 (82%)
 Frame = -1

Query: 408 RSFSVRSQTLDFSGSFFEGGRXXXXXXXXXXXXXXXXXALEDKEEPQCPPGLRQYETMAV 229
           RS +++SQ LDFSGSF+EG                   A+EDKE PQCPPGLRQYETMAV
Sbjct: 49  RSLTIKSQALDFSGSFYEGS-GFGSEEDPPTLTGSGMTAVEDKEPPQCPPGLRQYETMAV 107

Query: 228 LRPDMTEDERLAFTQRYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIY 49
           LRPDM+EDERLA TQ+YEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE+NTYLDGIY
Sbjct: 108 LRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIY 167

Query: 48  LLFTYFTKPESLSVLE 1
           LLFTYFTKPES+ +LE
Sbjct: 168 LLFTYFTKPESIEMLE 183


>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
           gi|255628961|gb|ACU14825.1| unknown [Glycine max]
          Length = 214

 Score =  201 bits (512), Expect = 5e-50
 Identities = 102/134 (76%), Positives = 112/134 (83%)
 Frame = -1

Query: 402 FSVRSQTLDFSGSFFEGGRXXXXXXXXXXXXXXXXXALEDKEEPQCPPGLRQYETMAVLR 223
           FS+R+QTLDFS SFFEGG                  A+E+KEEPQCPPGLRQYETM VLR
Sbjct: 61  FSIRAQTLDFSDSFFEGG--FGSEDVPSSPGGPGFTAVEEKEEPQCPPGLRQYETMMVLR 118

Query: 222 PDMTEDERLAFTQRYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLL 43
           PDM+EDERLA TQ+YEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE+NTYLDGIYLL
Sbjct: 119 PDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLL 178

Query: 42  FTYFTKPESLSVLE 1
           FTYFTKPES++ LE
Sbjct: 179 FTYFTKPESITPLE 192


>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
           gi|255625673|gb|ACU13181.1| unknown [Glycine max]
          Length = 214

 Score =  201 bits (512), Expect = 5e-50
 Identities = 101/134 (75%), Positives = 111/134 (82%)
 Frame = -1

Query: 402 FSVRSQTLDFSGSFFEGGRXXXXXXXXXXXXXXXXXALEDKEEPQCPPGLRQYETMAVLR 223
           FS+R+QTLDFS SFFEGG                   +E+KEEPQCPPGLRQYETM VLR
Sbjct: 61  FSIRAQTLDFSDSFFEGG--FGSEDDPSSPGGPGFTGVEEKEEPQCPPGLRQYETMMVLR 118

Query: 222 PDMTEDERLAFTQRYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLL 43
           PDM+EDERLA TQ+YEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE+NTYLDGIYLL
Sbjct: 119 PDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLL 178

Query: 42  FTYFTKPESLSVLE 1
           FTYFTKPES++ LE
Sbjct: 179 FTYFTKPESITPLE 192


>ref|XP_002297965.1| predicted protein [Populus trichocarpa] gi|222845223|gb|EEE82770.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  201 bits (510), Expect = 9e-50
 Identities = 104/153 (67%), Positives = 119/153 (77%), Gaps = 5/153 (3%)
 Frame = -1

Query: 444 LRPWTKTGDLPTRSFS-----VRSQTLDFSGSFFEGGRXXXXXXXXXXXXXXXXXALEDK 280
           L+P+  T  L  R+ S     V++QT+DF+GSF+EGG                  A+E+K
Sbjct: 11  LKPFPNTSKLVYRAHSNPTTAVKAQTVDFAGSFYEGG-IGSDDEPGSPIGSGTMTAVEEK 69

Query: 279 EEPQCPPGLRQYETMAVLRPDMTEDERLAFTQRYEELLVAGGGMYVEVFNRGVIPLAYSI 100
           E P CPPGLRQYETMAVLRPDM+EDERLA TQ+YEELLVAGGGMYVEVFNRGV+PLAYSI
Sbjct: 70  ETPPCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSI 129

Query: 99  KKKNKAGESNTYLDGIYLLFTYFTKPESLSVLE 1
           KKKNKAGESNTYLDGIYLLFTYFTKPES+ +LE
Sbjct: 130 KKKNKAGESNTYLDGIYLLFTYFTKPESIGILE 162


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