BLASTX nr result

ID: Dioscorea21_contig00002150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002150
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF69959.1| eukaryotic translation initiation factor 3 (eIF-3...   231   1e-58
gb|AFR45303.1| putative eukaryotic translation initiation factor...   199   8e-49
ref|XP_003565904.1| PREDICTED: eukaryotic translation initiation...   197   2e-48
ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...   191   2e-46
dbj|BAJ93681.1| predicted protein [Hordeum vulgare subsp. vulgare]    188   1e-45

>gb|ABF69959.1| eukaryotic translation initiation factor 3 (eIF-3), putative [Musa
           acuminata]
          Length = 597

 Score =  231 bits (590), Expect = 1e-58
 Identities = 126/226 (55%), Positives = 140/226 (61%), Gaps = 3/226 (1%)
 Frame = +3

Query: 129 MGFEVGVVPFNPDGWGPPDTPAVPLLSRRDTAGSATVQPANIPFAPFSRSEKLGRIADWT 308
           MGF+VGVVPFN DGWGPP++PA PLL  R+   S   QPANIPFAPFSRSEKLGR+ADWT
Sbjct: 1   MGFDVGVVPFNTDGWGPPESPAAPLLLSRNDGEST--QPANIPFAPFSRSEKLGRVADWT 58

Query: 309 RNPNFSN--PRPGANRDSVFDFALDDLAA-GVTADDDSSFRLVDXXXXXXXXXXXXXXXX 479
           RNPNF N   R    RD+VFDFA+D+ +A    A DDSSFRLVD                
Sbjct: 59  RNPNFGNNAARSAGGRDAVFDFAVDESSALSGAAADDSSFRLVDGKPPPRPKFGPRWRFQ 118

Query: 480 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYHNNHRSSGPASNAHHGPQRREASSLKSSV 659
                                        LY  NHRS   A         R+A + KSSV
Sbjct: 119 QRPQLPQRRDEEVEARKREAEKERARRDRLYRLNHRSYASAGGHGAAGSHRDAPARKSSV 178

Query: 660 DIQPEWTMLDQIPFSTFTKLSFSVPDPPEDLLICGALELYDRSYDR 797
           DIQPEWTMLDQIPFSTF+KLSFSVPDPPEDLL+CGALE YDRS+DR
Sbjct: 179 DIQPEWTMLDQIPFSTFSKLSFSVPDPPEDLLVCGALEFYDRSFDR 224


>gb|AFR45303.1| putative eukaryotic translation initiation factor 3 (eIF-3),
           partial [Musa acuminata AAA Group]
          Length = 486

 Score =  199 bits (505), Expect = 8e-49
 Identities = 112/209 (53%), Positives = 125/209 (59%), Gaps = 3/209 (1%)
 Frame = +3

Query: 180 PDTPAVPLLSRRDTAGSATVQPANIPFAPFSRSEKLGRIADWTRNPNFSN--PRPGANRD 353
           P++PA PLL  R+   S   QPANIPFAPFSRSEKLGR+ADWTRNPNF N   R    RD
Sbjct: 1   PESPAAPLLLSRNDGEST--QPANIPFAPFSRSEKLGRVADWTRNPNFGNNAARSAGGRD 58

Query: 354 SVFDFALDDLAA-GVTADDDSSFRLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 530
           +VFDFALD+ +A    A DDSSFRLVD                                 
Sbjct: 59  AVFDFALDESSALSGAAADDSSFRLVDGKPPPRPKFGPRWRFQQRPQLPQRRDEEVEARK 118

Query: 531 XXXXXXXXXXXXLYHNNHRSSGPASNAHHGPQRREASSLKSSVDIQPEWTMLDQIPFSTF 710
                       LYH +HRS   A         R+A + KSSVDIQPEWTMLDQIPFSTF
Sbjct: 119 REAEKERARRDRLYHLHHRSYASAGGHGAAGSHRDAPARKSSVDIQPEWTMLDQIPFSTF 178

Query: 711 TKLSFSVPDPPEDLLICGALELYDRSYDR 797
           +KLSFSVPDPPEDLL+CGALE YDRS+DR
Sbjct: 179 SKLSFSVPDPPEDLLVCGALEFYDRSFDR 207


>ref|XP_003565904.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Brachypodium distachyon]
          Length = 701

 Score =  197 bits (502), Expect = 2e-48
 Identities = 114/234 (48%), Positives = 136/234 (58%), Gaps = 2/234 (0%)
 Frame = +3

Query: 102 GIRSSRSPLMGFEVGVVPFNPDGWGPPDTPAVPLLSRRDTAGSATVQPANIPFAPFSRSE 281
           G +   +  MGF+VGVVPFNPDGWGPP+TPA P      + G AT   A+IPFAPFSRS+
Sbjct: 110 GSKPPPTATMGFDVGVVPFNPDGWGPPETPAAP-----PSLGGATAT-ASIPFAPFSRSD 163

Query: 282 KLGRIADWTRNPNFSNPRPGANRDSVFDF--ALDDLAAGVTADDDSSFRLVDXXXXXXXX 455
           KLGRIADWTRNP      P A+RDSVFDF  A D LAA   A +DSSF LVD        
Sbjct: 164 KLGRIADWTRNPGGPGMHPAASRDSVFDFTSADDSLAA---AAEDSSFHLVDAKPPPRHP 220

Query: 456 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYHNNHRSSGPASNAHHGPQRRE 635
                                                 ++ NHR     S+ H G +  +
Sbjct: 221 RFGPKWRFNQRPQLPQRRDEEVEAKRREAEKERARRERHYQNHR-----SHHHQGFRGNQ 275

Query: 636 ASSLKSSVDIQPEWTMLDQIPFSTFTKLSFSVPDPPEDLLICGALELYDRSYDR 797
           +SS K SVDIQP+WTM +QIPF+ FTKLSF+V D PEDLL+CGA+E YDR+YDR
Sbjct: 276 SSSAKPSVDIQPDWTMREQIPFANFTKLSFTVNDQPEDLLVCGAVEFYDRAYDR 329


>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Vitis vinifera]
          Length = 567

 Score =  191 bits (484), Expect = 2e-46
 Identities = 115/224 (51%), Positives = 129/224 (57%), Gaps = 2/224 (0%)
 Frame = +3

Query: 132 GFEVGVVPFNPDGWGPPDTPAVPLLSRRDTAGSATVQPANIPFAPFSRSEKLGRIADWTR 311
           GFEVG VPFNPDGWGPP++ +  L +           P N+PFAPFSRS+KLGRIADWTR
Sbjct: 4   GFEVGAVPFNPDGWGPPESASPHLPNH----------PINVPFAPFSRSDKLGRIADWTR 53

Query: 312 NPNFSNPRPGAN-RDSVFDFALDD-LAAGVTADDDSSFRLVDXXXXXXXXXXXXXXXXXX 485
             N  +  P  N  DSVFDF  DD   AG+ AD+DSSFRLVD                  
Sbjct: 54  TYNNPSRNPLRNPSDSVFDFTGDDSFGAGIAADEDSSFRLVDGKPPPRPKFGPKWRFQQQ 113

Query: 486 XXXXXXXXXXXXXXXXXXXXXXXXXXXLYHNNHRSSGPASNAHHGPQRREASSLKSSVDI 665
                                      LY N +RS G         QRREA+  KSSVDI
Sbjct: 114 RQLPQRRDEEVEARKREAEKERARRDRLY-NLNRSGG-------NNQRREAAVFKSSVDI 165

Query: 666 QPEWTMLDQIPFSTFTKLSFSVPDPPEDLLICGALELYDRSYDR 797
           QPEW MLDQIPFSTF+KLSFSVP+ PEDLL+CGALE YDRSYDR
Sbjct: 166 QPEWNMLDQIPFSTFSKLSFSVPE-PEDLLLCGALEFYDRSYDR 208


>dbj|BAJ93681.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  188 bits (477), Expect = 1e-45
 Identities = 112/237 (47%), Positives = 136/237 (57%), Gaps = 7/237 (2%)
 Frame = +3

Query: 108 RSSRSPLMGFEVGVVPFNPDGWGPPDTP-AVPLLSRRDTAGSATVQPANIPFAPFSRSEK 284
           R++ + +MGF+VGVVPFNPDGWGPPD P A PLL          V  A+IPFAPFSRS+K
Sbjct: 15  RAAAAAIMGFDVGVVPFNPDGWGPPDAPGAAPLL-------GGAVATASIPFAPFSRSDK 67

Query: 285 LGRIADWTRNPN----FSNPRPGANRDSVFDF--ALDDLAAGVTADDDSSFRLVDXXXXX 446
           LGRIADWTRNP       +    A+RDSVFDF  A D LAA   A +DSSF LVD     
Sbjct: 68  LGRIADWTRNPGHPGAHGHHAAAASRDSVFDFSSADDSLAA---AAEDSSFSLVDAKPPP 124

Query: 447 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYHNNHRSSGPASNAHHGPQ 626
                                                    ++ NHR     S+ H G +
Sbjct: 125 KHPRFGPKWRFNQRPQLPQRRDEEVEAKRREAEKERARRERHYQNHR-----SHHHQGFR 179

Query: 627 RREASSLKSSVDIQPEWTMLDQIPFSTFTKLSFSVPDPPEDLLICGALELYDRSYDR 797
             + SS K SVDIQP+WT+L+QIPF+ FTKLSF+V D PEDLL+CGA++ YDR+YDR
Sbjct: 180 GNQQSSAKPSVDIQPDWTILEQIPFANFTKLSFAVNDQPEDLLVCGAVDSYDRAYDR 236


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