BLASTX nr result

ID: Dioscorea21_contig00002140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002140
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063296.1| Os09g0443500 [Oryza sativa Japonica Group] g...   183   1e-44
gb|EEC84654.1| hypothetical protein OsI_31548 [Oryza sativa Indi...   182   3e-44
ref|XP_003578193.1| PREDICTED: putative mediator of RNA polymera...   179   2e-43
ref|NP_001144139.1| uncharacterized protein LOC100276988 [Zea ma...   176   1e-42
dbj|BAJ99746.1| predicted protein [Hordeum vulgare subsp. vulgar...   174   5e-42

>ref|NP_001063296.1| Os09g0443500 [Oryza sativa Japonica Group]
           gi|51536008|dbj|BAD38088.1| unknown protein [Oryza
           sativa Japonica Group] gi|113631529|dbj|BAF25210.1|
           Os09g0443500 [Oryza sativa Japonica Group]
           gi|215693210|dbj|BAG88592.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222641676|gb|EEE69808.1| hypothetical protein
           OsJ_29541 [Oryza sativa Japonica Group]
          Length = 230

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/109 (77%), Positives = 100/109 (91%)
 Frame = -2

Query: 400 VVLNFEGFQYQLGDFQIRVGKCVPSQSESLRGIMMEVEYLPLSSIEKSRQIMEEFVEIWQ 221
           V LNFEGFQYQLGDF +R+GKCVP+ SE+LRGIMMEVEY PLSSIEKSR +ME+F +IWQ
Sbjct: 120 VTLNFEGFQYQLGDFCLRIGKCVPNNSETLRGIMMEVEYYPLSSIEKSRAVMEDFFDIWQ 179

Query: 220 ETVWKKSLPGHFLHIDSNFTDYGLHDYYTPQHTAVQYATCMQQLIAAVR 74
           ETV KKSLPGHF+H++SNF++YGL D+Y+ QHTAVQYATC+QQL+AAVR
Sbjct: 180 ETVAKKSLPGHFIHVESNFSEYGLSDHYSFQHTAVQYATCLQQLMAAVR 228


>gb|EEC84654.1| hypothetical protein OsI_31548 [Oryza sativa Indica Group]
          Length = 230

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/109 (77%), Positives = 99/109 (90%)
 Frame = -2

Query: 400 VVLNFEGFQYQLGDFQIRVGKCVPSQSESLRGIMMEVEYLPLSSIEKSRQIMEEFVEIWQ 221
           V LNFEGFQYQLGDF +R+GKCVP+ SE+LRGIMMEVEY PLSSIEKSR  ME+F +IWQ
Sbjct: 120 VTLNFEGFQYQLGDFCLRIGKCVPNNSETLRGIMMEVEYYPLSSIEKSRAAMEDFFDIWQ 179

Query: 220 ETVWKKSLPGHFLHIDSNFTDYGLHDYYTPQHTAVQYATCMQQLIAAVR 74
           ETV KKSLPGHF+H++SNF++YGL D+Y+ QHTAVQYATC+QQL+AAVR
Sbjct: 180 ETVAKKSLPGHFIHVESNFSEYGLSDHYSFQHTAVQYATCLQQLMAAVR 228


>ref|XP_003578193.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Brachypodium distachyon]
          Length = 225

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/109 (76%), Positives = 98/109 (89%)
 Frame = -2

Query: 400 VVLNFEGFQYQLGDFQIRVGKCVPSQSESLRGIMMEVEYLPLSSIEKSRQIMEEFVEIWQ 221
           V LNFEGFQYQLGDF +R+GKCVP+ SE+LRGIMMEVEY PLSSIEKSR IME+F +IWQ
Sbjct: 116 VTLNFEGFQYQLGDFCLRIGKCVPNNSETLRGIMMEVEYYPLSSIEKSRAIMEDFFDIWQ 175

Query: 220 ETVWKKSLPGHFLHIDSNFTDYGLHDYYTPQHTAVQYATCMQQLIAAVR 74
           ET+ KKSLPG F+H++SNF+DYGL D Y+ QHTA+QYATC+QQL+AAVR
Sbjct: 176 ETLAKKSLPGRFIHVESNFSDYGLSDNYSFQHTAIQYATCLQQLMAAVR 224


>ref|NP_001144139.1| uncharacterized protein LOC100276988 [Zea mays]
           gi|195637436|gb|ACG38186.1| hypothetical protein [Zea
           mays] gi|224032871|gb|ACN35511.1| unknown [Zea mays]
          Length = 225

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/108 (75%), Positives = 97/108 (89%)
 Frame = -2

Query: 400 VVLNFEGFQYQLGDFQIRVGKCVPSQSESLRGIMMEVEYLPLSSIEKSRQIMEEFVEIWQ 221
           V LNFEGFQYQLGDF +R+GKCVP+ SE+LRGIMMEVEY PL+SIEKS+ +ME+F +IWQ
Sbjct: 114 VALNFEGFQYQLGDFCLRIGKCVPNNSEALRGIMMEVEYYPLTSIEKSKAVMEDFFDIWQ 173

Query: 220 ETVWKKSLPGHFLHIDSNFTDYGLHDYYTPQHTAVQYATCMQQLIAAV 77
           ETV KKSLPG F+H+DSNF++YGL D Y+ QHTAVQYATC+QQL+AAV
Sbjct: 174 ETVAKKSLPGQFIHVDSNFSEYGLSDQYSFQHTAVQYATCLQQLMAAV 221


>dbj|BAJ99746.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326528331|dbj|BAJ93347.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 223

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/109 (74%), Positives = 98/109 (89%)
 Frame = -2

Query: 400 VVLNFEGFQYQLGDFQIRVGKCVPSQSESLRGIMMEVEYLPLSSIEKSRQIMEEFVEIWQ 221
           V LNFEGFQYQLGDF +R+GKCVP+ +E+LRGIMMEVEY PLSSIEKSR IM +F +IWQ
Sbjct: 114 VNLNFEGFQYQLGDFCLRIGKCVPNNTETLRGIMMEVEYYPLSSIEKSRAIMVDFFDIWQ 173

Query: 220 ETVWKKSLPGHFLHIDSNFTDYGLHDYYTPQHTAVQYATCMQQLIAAVR 74
           ET+ KKSLPG F+H++SNF++YGL D+Y+ QHTAVQYATC+QQL+AAVR
Sbjct: 174 ETLAKKSLPGRFIHVESNFSEYGLSDHYSFQHTAVQYATCLQQLMAAVR 222


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