BLASTX nr result
ID: Dioscorea21_contig00002139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002139
(1884 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [... 490 0.0
ref|NP_171956.2| coenzyme F420 hydrogenase beta subunit [Arabido... 490 0.0
ref|XP_002315601.1| predicted protein [Populus trichocarpa] gi|2... 488 0.0
ref|XP_004134392.1| PREDICTED: 7-hydroxymethyl chlorophyll a red... 496 0.0
ref|XP_004157707.1| PREDICTED: LOW QUALITY PROTEIN: 7-hydroxymet... 496 0.0
>ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [Vitis vinifera]
gi|297741879|emb|CBI33314.3| unnamed protein product
[Vitis vinifera]
Length = 457
Score = 490 bits (1262), Expect(2) = 0.0
Identities = 237/295 (80%), Positives = 262/295 (88%), Gaps = 1/295 (0%)
Frame = +3
Query: 165 SVELRDDWRKRSKPIPPGGIYPAKEHCSRCGLCDTYYIAHVRNACAFLGDGMSRIEALEP 344
SV+LRDDWR+RS+PIPPGG YPAK+HCSRCGLCDTYYIAHV+NACAFLGDGMS+IE+LEP
Sbjct: 31 SVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLEP 90
Query: 345 VVHGRGRKA-DLQDMYFGVHEELLYARKIKPVEGAQWTGIVTTIAVEMLKANLVEAVVCV 521
+VHGRGRKA L + Y GV+E+LLYARK +PVEGAQWTGIVTTIA+EMLKA +VEAV+CV
Sbjct: 91 LVHGRGRKAYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVICV 150
Query: 522 QSDPNDRLSPRPVLARTPDEVFAAKGVKPTLSPNLDTLALVEAAGVKRLLFCGVGCQVEX 701
QSDP DRLSPRPVLARTPDEV AAKGVKPTLSPNL+TLALVEAAGVKRLLFCGVGCQV+
Sbjct: 151 QSDPEDRLSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ- 209
Query: 702 XXXXXXXXXXXXXXXXXXXALRSIEKHLGLEKLYVLGTNCVDNGTREGLEKFLKSASNDP 881
ALRS+E+HL L+KLYVLGTNCVDNGTREGL+KFL +AS++P
Sbjct: 210 -------------------ALRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEP 250
Query: 882 DTVLHYEFMQDYKVHLKHLDGHIEEVPYFSLPANELVDVIAPSCYSCFDYTNALA 1046
+TVLHYEFMQDYKVHLKHLDGHIEEVPYF LPANELVDVIAPSCYSCFDYTNALA
Sbjct: 251 ETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNALA 305
Score = 241 bits (615), Expect(2) = 0.0
Identities = 113/148 (76%), Positives = 128/148 (86%)
Frame = +2
Query: 1100 GYMGVPKYAGLSMTQHPQYITIRNERGREMFSLVENLLEITPTTSSGNRQPFVMETVXXX 1279
GYMGVPKY G+SMTQHPQY+T+RNERGREM SLVENLLEI PTTSSG+R+PFVMETV
Sbjct: 310 GYMGVPKYPGVSMTQHPQYVTVRNERGREMLSLVENLLEIIPTTSSGDRRPFVMETVKAD 369
Query: 1280 XXXXXXXXPSQPAPRFIGNLIAYILNLIGPKGLEFARYSLDYHTIRNYLYVMRKWGKTRA 1459
PSQPAP+F+GNLIA+ILNLIGPKGLEFARYSLDYHTIRNY+YV R WGK RA
Sbjct: 370 DNAKLGKGPSQPAPKFVGNLIAFILNLIGPKGLEFARYSLDYHTIRNYIYVNRMWGKQRA 429
Query: 1460 DRHIPSYAKKIVESYNENGVVDQMLSQK 1543
DRH+PSYAKK+V+ YN+NG +D+MLS K
Sbjct: 430 DRHMPSYAKKLVDLYNQNGEIDKMLSNK 457
>ref|NP_171956.2| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
gi|75150253|sp|Q8GS60.1|HCAR_ARATH RecName:
Full=7-hydroxymethyl chlorophyll a reductase,
chloroplastic; Flags: Precursor
gi|25083091|gb|AAN72040.1| unknown protein [Arabidopsis
thaliana] gi|26451024|dbj|BAC42618.1| unknown protein
[Arabidopsis thaliana] gi|30387563|gb|AAP31947.1|
At1g04620 [Arabidopsis thaliana]
gi|332189601|gb|AEE27722.1| coenzyme F420 hydrogenase
beta subunit [Arabidopsis thaliana]
Length = 462
Score = 490 bits (1261), Expect(2) = 0.0
Identities = 235/294 (79%), Positives = 263/294 (89%), Gaps = 1/294 (0%)
Frame = +3
Query: 168 VELRDDWRKRSKPIPPGGIYPAKEHCSRCGLCDTYYIAHVRNACAFLGDGMSRIEALEPV 347
V+LR+DWR++S+PIPPGG YPAK+HCS+CGLCDTYYIAHV+ ACAFLGDGMSRIE+LEPV
Sbjct: 37 VKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLEPV 96
Query: 348 VHGRGRKAD-LQDMYFGVHEELLYARKIKPVEGAQWTGIVTTIAVEMLKANLVEAVVCVQ 524
VHGRGRKAD LQD YFGVH+E LYARK+KPVEGAQWTGIVTTIA+EMLK+N+VEAVVCVQ
Sbjct: 97 VHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVCVQ 156
Query: 525 SDPNDRLSPRPVLARTPDEVFAAKGVKPTLSPNLDTLALVEAAGVKRLLFCGVGCQVEXX 704
SDP DRLSPRPVLARTP+EV AA+GVKPTLSPNL+TL L+EA+GVKRLLFCGVGCQV+
Sbjct: 157 SDPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQ-- 214
Query: 705 XXXXXXXXXXXXXXXXXXALRSIEKHLGLEKLYVLGTNCVDNGTREGLEKFLKSASNDPD 884
ALRS+E+HL LEKLYVLGTNCVDNGTR+GL+KFLK+AS +P+
Sbjct: 215 ------------------ALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPE 256
Query: 885 TVLHYEFMQDYKVHLKHLDGHIEEVPYFSLPANELVDVIAPSCYSCFDYTNALA 1046
TVLHYEFMQDYKV LKHLDGHIEEVPYFSLPAN+LVDVIAPSCYSCFDYTNALA
Sbjct: 257 TVLHYEFMQDYKVQLKHLDGHIEEVPYFSLPANDLVDVIAPSCYSCFDYTNALA 310
Score = 234 bits (597), Expect(2) = 0.0
Identities = 110/148 (74%), Positives = 127/148 (85%)
Frame = +2
Query: 1100 GYMGVPKYAGLSMTQHPQYITIRNERGREMFSLVENLLEITPTTSSGNRQPFVMETVXXX 1279
GYMGVPKY+GL+MT HPQYIT+RNERG+EM SLVENLLEITPT SSG+R+PFV ETV
Sbjct: 315 GYMGVPKYSGLNMTDHPQYITVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKAD 374
Query: 1280 XXXXXXXXPSQPAPRFIGNLIAYILNLIGPKGLEFARYSLDYHTIRNYLYVMRKWGKTRA 1459
P+QPAP F+GN+IA+ILNL+GPKGLEFARYSLDYHTIRNYLYV RKWGK RA
Sbjct: 375 DAAKFGQGPAQPAPLFVGNIIAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRA 434
Query: 1460 DRHIPSYAKKIVESYNENGVVDQMLSQK 1543
+ H+PSYAKKIVE YN+NG +D+MLS+K
Sbjct: 435 NTHMPSYAKKIVEMYNKNGQIDKMLSKK 462
>ref|XP_002315601.1| predicted protein [Populus trichocarpa] gi|222864641|gb|EEF01772.1|
predicted protein [Populus trichocarpa]
Length = 456
Score = 488 bits (1256), Expect(2) = 0.0
Identities = 239/304 (78%), Positives = 262/304 (86%), Gaps = 1/304 (0%)
Frame = +3
Query: 138 SCGDRKSSGSVELRDDWRKRSKPIPPGGIYPAKEHCSRCGLCDTYYIAHVRNACAFLGDG 317
S +K S V R+DWR+RSKPIPPGGIYPAK+HCS+CGLCDTYY+AHV+NACAFLGDG
Sbjct: 22 SNSSKKYSAKVT-REDWRQRSKPIPPGGIYPAKDHCSQCGLCDTYYVAHVKNACAFLGDG 80
Query: 318 MSRIEALEPVVHGRGRKAD-LQDMYFGVHEELLYARKIKPVEGAQWTGIVTTIAVEMLKA 494
MS+IE LEPVVHGRGRKAD + YFGVHEELLYARK KPVEGAQWTGIVT+IA+EMLK+
Sbjct: 81 MSKIEGLEPVVHGRGRKADSFDEAYFGVHEELLYARKTKPVEGAQWTGIVTSIAIEMLKS 140
Query: 495 NLVEAVVCVQSDPNDRLSPRPVLARTPDEVFAAKGVKPTLSPNLDTLALVEAAGVKRLLF 674
+VEAV+CVQSDP DR SPRPVLARTPDEV AAKGVKPTLSPNL+TLALVEAAGVKRLLF
Sbjct: 141 GMVEAVICVQSDPEDRFSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLF 200
Query: 675 CGVGCQVEXXXXXXXXXXXXXXXXXXXXALRSIEKHLGLEKLYVLGTNCVDNGTREGLEK 854
CGVGCQV+ ALRS+E HL L+KLYVLGTNCVDNGTREGL+K
Sbjct: 201 CGVGCQVQ--------------------ALRSVEHHLNLDKLYVLGTNCVDNGTREGLDK 240
Query: 855 FLKSASNDPDTVLHYEFMQDYKVHLKHLDGHIEEVPYFSLPANELVDVIAPSCYSCFDYT 1034
FLK+AS++P+TVLHYEFMQDYKVHLKHLDG IEEVPYF LPANELVDVIAPSCYSCFDYT
Sbjct: 241 FLKAASDEPETVLHYEFMQDYKVHLKHLDGRIEEVPYFCLPANELVDVIAPSCYSCFDYT 300
Query: 1035 NALA 1046
NALA
Sbjct: 301 NALA 304
Score = 233 bits (593), Expect(2) = 0.0
Identities = 110/148 (74%), Positives = 122/148 (82%)
Frame = +2
Query: 1100 GYMGVPKYAGLSMTQHPQYITIRNERGREMFSLVENLLEITPTTSSGNRQPFVMETVXXX 1279
GYMGVPKY G+SMTQHPQYIT+RNERGREM LV+NLLEITPT +SG+R+PFVMETV
Sbjct: 309 GYMGVPKYPGVSMTQHPQYITVRNERGREMIGLVKNLLEITPTINSGDRRPFVMETVNAD 368
Query: 1280 XXXXXXXXPSQPAPRFIGNLIAYILNLIGPKGLEFARYSLDYHTIRNYLYVMRKWGKTRA 1459
PSQP P+FIGN IA++LNL+GPKGLEFARYSLDYHTIRNYLY R WGK RA
Sbjct: 369 DNAKLGKGPSQPLPKFIGNFIAFLLNLVGPKGLEFARYSLDYHTIRNYLYTNRTWGKDRA 428
Query: 1460 DRHIPSYAKKIVESYNENGVVDQMLSQK 1543
DRH PSYAKKIVESYN+NG +D ML K
Sbjct: 429 DRHTPSYAKKIVESYNKNGQIDLMLQNK 456
>ref|XP_004134392.1| PREDICTED: 7-hydroxymethyl chlorophyll a reductase,
chloroplastic-like [Cucumis sativus]
Length = 459
Score = 496 bits (1278), Expect(2) = 0.0
Identities = 245/313 (78%), Positives = 268/313 (85%), Gaps = 7/313 (2%)
Frame = +3
Query: 129 LPISCGDRKSSGS------VELRDDWRKRSKPIPPGGIYPAKEHCSRCGLCDTYYIAHVR 290
LPI C SS + V+LRDDWR+RS+PIPPGG YPAKE CSRCGLCDTYYIAHV+
Sbjct: 14 LPILCSSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQCSRCGLCDTYYIAHVK 73
Query: 291 NACAFLGDGMSRIEALEPVVHGRGRKAD-LQDMYFGVHEELLYARKIKPVEGAQWTGIVT 467
+ACAFLGDGMSRIE +EPVVHGRGRK D L + YFGVHE+LLYARKIKPVEGAQWTGIVT
Sbjct: 74 DACAFLGDGMSRIEEMEPVVHGRGRKTDTLDETYFGVHEKLLYARKIKPVEGAQWTGIVT 133
Query: 468 TIAVEMLKANLVEAVVCVQSDPNDRLSPRPVLARTPDEVFAAKGVKPTLSPNLDTLALVE 647
TIAVEMLK+ +VEAVVCVQSDP DRLSPRP+LARTP+EV AA+GVKPTLSPNL+TLALVE
Sbjct: 134 TIAVEMLKSGMVEAVVCVQSDPEDRLSPRPILARTPEEVLAARGVKPTLSPNLNTLALVE 193
Query: 648 AAGVKRLLFCGVGCQVEXXXXXXXXXXXXXXXXXXXXALRSIEKHLGLEKLYVLGTNCVD 827
AAGVKRLLFCGVGCQV+ ALRS+E+HL LEKLYVLGTNCVD
Sbjct: 194 AAGVKRLLFCGVGCQVQ--------------------ALRSVEQHLNLEKLYVLGTNCVD 233
Query: 828 NGTREGLEKFLKSASNDPDTVLHYEFMQDYKVHLKHLDGHIEEVPYFSLPANELVDVIAP 1007
NGTREGL+KFLK+AS +P+TVLHYEFMQDYKVHLKHLDGHIEEVPYF LPAN+LVDVIAP
Sbjct: 234 NGTREGLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP 293
Query: 1008 SCYSCFDYTNALA 1046
SCYSCFDYTNALA
Sbjct: 294 SCYSCFDYTNALA 306
Score = 223 bits (568), Expect(2) = 0.0
Identities = 105/146 (71%), Positives = 121/146 (82%)
Frame = +2
Query: 1100 GYMGVPKYAGLSMTQHPQYITIRNERGREMFSLVENLLEITPTTSSGNRQPFVMETVXXX 1279
GYMGVPKY+G+SMTQHPQYIT+RNERGREM LVE LEITPT S+GNR+P VMETV
Sbjct: 311 GYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYLEITPTISNGNRRPLVMETVKAD 370
Query: 1280 XXXXXXXXPSQPAPRFIGNLIAYILNLIGPKGLEFARYSLDYHTIRNYLYVMRKWGKTRA 1459
PSQPAP+FIGN+IA+ LNLIGPKGLEFARYSLDYHTIRN+LYV R WGK RA
Sbjct: 371 DDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARYSLDYHTIRNHLYVSRIWGKQRA 430
Query: 1460 DRHIPSYAKKIVESYNENGVVDQMLS 1537
D+H P+YAKKIV+ YN+ G +D++LS
Sbjct: 431 DKHEPTYAKKIVDLYNQKGEIDRILS 456
>ref|XP_004157707.1| PREDICTED: LOW QUALITY PROTEIN: 7-hydroxymethyl chlorophyll a
reductase, chloroplastic-like [Cucumis sativus]
Length = 459
Score = 496 bits (1277), Expect(2) = 0.0
Identities = 245/313 (78%), Positives = 268/313 (85%), Gaps = 7/313 (2%)
Frame = +3
Query: 129 LPISCGDRKSSGS------VELRDDWRKRSKPIPPGGIYPAKEHCSRCGLCDTYYIAHVR 290
LPI C SS + V+LRDDWR+RS+PIPPGG YPAKE CSRCGLCDTYYIAHV+
Sbjct: 14 LPILCSSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQCSRCGLCDTYYIAHVK 73
Query: 291 NACAFLGDGMSRIEALEPVVHGRGRKAD-LQDMYFGVHEELLYARKIKPVEGAQWTGIVT 467
+ACAFLGDGMSRIE +EPVVHGRGRK D L + YFGVHE+LLYARKIKPVEGAQWTGIVT
Sbjct: 74 DACAFLGDGMSRIEEMEPVVHGRGRKXDTLDETYFGVHEKLLYARKIKPVEGAQWTGIVT 133
Query: 468 TIAVEMLKANLVEAVVCVQSDPNDRLSPRPVLARTPDEVFAAKGVKPTLSPNLDTLALVE 647
TIAVEMLK+ +VEAVVCVQSDP DRLSPRP+LARTP+EV AA+GVKPTLSPNL+TLALVE
Sbjct: 134 TIAVEMLKSGMVEAVVCVQSDPEDRLSPRPILARTPEEVLAARGVKPTLSPNLNTLALVE 193
Query: 648 AAGVKRLLFCGVGCQVEXXXXXXXXXXXXXXXXXXXXALRSIEKHLGLEKLYVLGTNCVD 827
AAGVKRLLFCGVGCQV+ ALRS+E+HL LEKLYVLGTNCVD
Sbjct: 194 AAGVKRLLFCGVGCQVQ--------------------ALRSVEQHLNLEKLYVLGTNCVD 233
Query: 828 NGTREGLEKFLKSASNDPDTVLHYEFMQDYKVHLKHLDGHIEEVPYFSLPANELVDVIAP 1007
NGTREGL+KFLK+AS +P+TVLHYEFMQDYKVHLKHLDGHIEEVPYF LPAN+LVDVIAP
Sbjct: 234 NGTREGLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP 293
Query: 1008 SCYSCFDYTNALA 1046
SCYSCFDYTNALA
Sbjct: 294 SCYSCFDYTNALA 306
Score = 223 bits (568), Expect(2) = 0.0
Identities = 105/146 (71%), Positives = 121/146 (82%)
Frame = +2
Query: 1100 GYMGVPKYAGLSMTQHPQYITIRNERGREMFSLVENLLEITPTTSSGNRQPFVMETVXXX 1279
GYMGVPKY+G+SMTQHPQYIT+RNERGREM LVE LEITPT S+GNR+P VMETV
Sbjct: 311 GYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYLEITPTISNGNRRPLVMETVKAD 370
Query: 1280 XXXXXXXXPSQPAPRFIGNLIAYILNLIGPKGLEFARYSLDYHTIRNYLYVMRKWGKTRA 1459
PSQPAP+FIGN+IA+ LNLIGPKGLEFARYSLDYHTIRN+LYV R WGK RA
Sbjct: 371 DDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARYSLDYHTIRNHLYVSRIWGKQRA 430
Query: 1460 DRHIPSYAKKIVESYNENGVVDQMLS 1537
D+H P+YAKKIV+ YN+ G +D++LS
Sbjct: 431 DKHEPTYAKKIVDLYNQKGEIDRILS 456