BLASTX nr result

ID: Dioscorea21_contig00002134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002134
         (1963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39777.3| unnamed protein product [Vitis vinifera]              307   6e-81
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   307   6e-81
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   302   2e-79
emb|CBI18525.3| unnamed protein product [Vitis vinifera]              300   7e-79
ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homol...   300   7e-79

>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  307 bits (787), Expect = 6e-81
 Identities = 154/206 (74%), Positives = 178/206 (86%), Gaps = 3/206 (1%)
 Frame = +2

Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283
           M S+S+  +   G  DGASPGKIF+GGL K      F +HF KYG I DSVIM+D++T Q
Sbjct: 1   MGSKSKSDNPHTG--DGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQ 58

Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457
           PRGFGFITYADPSVVD+VIEDTHVI GKQVEIKRTIP+GS  +KDFKTKKIFVGG+PS+V
Sbjct: 59  PRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTV 118

Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637
           T+DEFKNFFSKYGKV+EHQII DH TNRSRGFGFI+FDSE+VVD++++KGNMID+AG+QV
Sbjct: 119 TEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQV 178

Query: 638 EIKKAEPKKASN-PPSSAYGSNFRAR 712
           EIKKAEPKKASN PP+ AYGSN RAR
Sbjct: 179 EIKKAEPKKASNPPPAPAYGSNSRAR 204


>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
           vinifera] gi|147768836|emb|CAN78130.1| hypothetical
           protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  307 bits (787), Expect = 6e-81
 Identities = 154/206 (74%), Positives = 178/206 (86%), Gaps = 3/206 (1%)
 Frame = +2

Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283
           M S+S+  +   G  DGASPGKIF+GGL K      F +HF KYG I DSVIM+D++T Q
Sbjct: 1   MGSKSKSDNPHTG--DGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQ 58

Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457
           PRGFGFITYADPSVVD+VIEDTHVI GKQVEIKRTIP+GS  +KDFKTKKIFVGG+PS+V
Sbjct: 59  PRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTV 118

Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637
           T+DEFKNFFSKYGKV+EHQII DH TNRSRGFGFI+FDSE+VVD++++KGNMID+AG+QV
Sbjct: 119 TEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQV 178

Query: 638 EIKKAEPKKASN-PPSSAYGSNFRAR 712
           EIKKAEPKKASN PP+ AYGSN RAR
Sbjct: 179 EIKKAEPKKASNPPPAPAYGSNSRAR 204


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538031|gb|EEF39644.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 348

 Score =  302 bits (773), Expect = 2e-79
 Identities = 152/206 (73%), Positives = 176/206 (85%), Gaps = 3/206 (1%)
 Frame = +2

Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283
           MAS+S+  +  +G  DGASPGKIF+GGL K      F +HF +YG I DSVIM+D++T Q
Sbjct: 1   MASKSKSDNPHSG--DGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQ 58

Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457
           PRGFGFITYADPSVVDKVIEDTHVI GKQVEIKRTIP+GS  +KDFKTKKIFVGGIPSSV
Sbjct: 59  PRGFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSV 118

Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637
           T+DEFK FFSKYG+V+EHQII DH TNRSRGFGFI+FDSE+ VD++L+ GNMID+AG+QV
Sbjct: 119 TEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQV 178

Query: 638 EIKKAEPKKASN-PPSSAYGSNFRAR 712
           EIKKAEPKKASN PP+ +YGSN R R
Sbjct: 179 EIKKAEPKKASNPPPAPSYGSNSRGR 204


>emb|CBI18525.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  300 bits (769), Expect = 7e-79
 Identities = 151/206 (73%), Positives = 176/206 (85%), Gaps = 3/206 (1%)
 Frame = +2

Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283
           M S+ +   +  G  DGASPGKIF+GGL K      F +HFEKYG I DSVIM+D++T Q
Sbjct: 1   MGSKLKGNTTHTG--DGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQ 58

Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457
           PRGFGF+TYADPSVVD VIEDTHVI GKQVEIKRTIP+GS  +KDFKTKKIFVGG+PS+V
Sbjct: 59  PRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTV 118

Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637
           T+DEFK+FFSKYGKV EHQII DH TNRSRGFGFI+F+SE+VVD++L++GNMID+AG+QV
Sbjct: 119 TEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQV 178

Query: 638 EIKKAEPKKASNPPS-SAYGSNFRAR 712
           EIKKAEPKKASNPP  SA+GSN RAR
Sbjct: 179 EIKKAEPKKASNPPHVSAFGSNSRAR 204


>ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
          Length = 348

 Score =  300 bits (769), Expect = 7e-79
 Identities = 151/206 (73%), Positives = 176/206 (85%), Gaps = 3/206 (1%)
 Frame = +2

Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283
           M S+ +   +  G  DGASPGKIF+GGL K      F +HFEKYG I DSVIM+D++T Q
Sbjct: 1   MGSKLKGNTTHTG--DGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQ 58

Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457
           PRGFGF+TYADPSVVD VIEDTHVI GKQVEIKRTIP+GS  +KDFKTKKIFVGG+PS+V
Sbjct: 59  PRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTV 118

Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637
           T+DEFK+FFSKYGKV EHQII DH TNRSRGFGFI+F+SE+VVD++L++GNMID+AG+QV
Sbjct: 119 TEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQV 178

Query: 638 EIKKAEPKKASNPPS-SAYGSNFRAR 712
           EIKKAEPKKASNPP  SA+GSN RAR
Sbjct: 179 EIKKAEPKKASNPPHVSAFGSNSRAR 204