BLASTX nr result
ID: Dioscorea21_contig00002134
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00002134 (1963 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39777.3| unnamed protein product [Vitis vinifera] 307 6e-81 ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop... 307 6e-81 ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ... 302 2e-79 emb|CBI18525.3| unnamed protein product [Vitis vinifera] 300 7e-79 ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homol... 300 7e-79 >emb|CBI39777.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 307 bits (787), Expect = 6e-81 Identities = 154/206 (74%), Positives = 178/206 (86%), Gaps = 3/206 (1%) Frame = +2 Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283 M S+S+ + G DGASPGKIF+GGL K F +HF KYG I DSVIM+D++T Q Sbjct: 1 MGSKSKSDNPHTG--DGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQ 58 Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457 PRGFGFITYADPSVVD+VIEDTHVI GKQVEIKRTIP+GS +KDFKTKKIFVGG+PS+V Sbjct: 59 PRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTV 118 Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637 T+DEFKNFFSKYGKV+EHQII DH TNRSRGFGFI+FDSE+VVD++++KGNMID+AG+QV Sbjct: 119 TEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQV 178 Query: 638 EIKKAEPKKASN-PPSSAYGSNFRAR 712 EIKKAEPKKASN PP+ AYGSN RAR Sbjct: 179 EIKKAEPKKASNPPPAPAYGSNSRAR 204 >ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis vinifera] gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera] Length = 348 Score = 307 bits (787), Expect = 6e-81 Identities = 154/206 (74%), Positives = 178/206 (86%), Gaps = 3/206 (1%) Frame = +2 Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283 M S+S+ + G DGASPGKIF+GGL K F +HF KYG I DSVIM+D++T Q Sbjct: 1 MGSKSKSDNPHTG--DGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQ 58 Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457 PRGFGFITYADPSVVD+VIEDTHVI GKQVEIKRTIP+GS +KDFKTKKIFVGG+PS+V Sbjct: 59 PRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTV 118 Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637 T+DEFKNFFSKYGKV+EHQII DH TNRSRGFGFI+FDSE+VVD++++KGNMID+AG+QV Sbjct: 119 TEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQV 178 Query: 638 EIKKAEPKKASN-PPSSAYGSNFRAR 712 EIKKAEPKKASN PP+ AYGSN RAR Sbjct: 179 EIKKAEPKKASNPPPAPAYGSNSRAR 204 >ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] Length = 348 Score = 302 bits (773), Expect = 2e-79 Identities = 152/206 (73%), Positives = 176/206 (85%), Gaps = 3/206 (1%) Frame = +2 Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283 MAS+S+ + +G DGASPGKIF+GGL K F +HF +YG I DSVIM+D++T Q Sbjct: 1 MASKSKSDNPHSG--DGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQ 58 Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457 PRGFGFITYADPSVVDKVIEDTHVI GKQVEIKRTIP+GS +KDFKTKKIFVGGIPSSV Sbjct: 59 PRGFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSV 118 Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637 T+DEFK FFSKYG+V+EHQII DH TNRSRGFGFI+FDSE+ VD++L+ GNMID+AG+QV Sbjct: 119 TEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQV 178 Query: 638 EIKKAEPKKASN-PPSSAYGSNFRAR 712 EIKKAEPKKASN PP+ +YGSN R R Sbjct: 179 EIKKAEPKKASNPPPAPSYGSNSRGR 204 >emb|CBI18525.3| unnamed protein product [Vitis vinifera] Length = 242 Score = 300 bits (769), Expect = 7e-79 Identities = 151/206 (73%), Positives = 176/206 (85%), Gaps = 3/206 (1%) Frame = +2 Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283 M S+ + + G DGASPGKIF+GGL K F +HFEKYG I DSVIM+D++T Q Sbjct: 1 MGSKLKGNTTHTG--DGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQ 58 Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457 PRGFGF+TYADPSVVD VIEDTHVI GKQVEIKRTIP+GS +KDFKTKKIFVGG+PS+V Sbjct: 59 PRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTV 118 Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637 T+DEFK+FFSKYGKV EHQII DH TNRSRGFGFI+F+SE+VVD++L++GNMID+AG+QV Sbjct: 119 TEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQV 178 Query: 638 EIKKAEPKKASNPPS-SAYGSNFRAR 712 EIKKAEPKKASNPP SA+GSN RAR Sbjct: 179 EIKKAEPKKASNPPHVSAFGSNSRAR 204 >ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera] Length = 348 Score = 300 bits (769), Expect = 7e-79 Identities = 151/206 (73%), Positives = 176/206 (85%), Gaps = 3/206 (1%) Frame = +2 Query: 104 MASRSRRGDSRNGERDGASPGKIFVGGLHKGADDRLFREHFEKYGAIDDSVIMRDKHTRQ 283 M S+ + + G DGASPGKIF+GGL K F +HFEKYG I DSVIM+D++T Q Sbjct: 1 MGSKLKGNTTHTG--DGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQ 58 Query: 284 PRGFGFITYADPSVVDKVIEDTHVILGKQVEIKRTIPRGS--AKDFKTKKIFVGGIPSSV 457 PRGFGF+TYADPSVVD VIEDTHVI GKQVEIKRTIP+GS +KDFKTKKIFVGG+PS+V Sbjct: 59 PRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTV 118 Query: 458 TDDEFKNFFSKYGKVLEHQIITDHSTNRSRGFGFIVFDSEQVVDDLLAKGNMIDLAGSQV 637 T+DEFK+FFSKYGKV EHQII DH TNRSRGFGFI+F+SE+VVD++L++GNMID+AG+QV Sbjct: 119 TEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQV 178 Query: 638 EIKKAEPKKASNPPS-SAYGSNFRAR 712 EIKKAEPKKASNPP SA+GSN RAR Sbjct: 179 EIKKAEPKKASNPPHVSAFGSNSRAR 204