BLASTX nr result

ID: Dioscorea21_contig00002131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002131
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133785.1| PREDICTED: 40S ribosomal protein S6-like [Cu...    56   3e-06
gb|ADR71292.1| 40S ribosomal protein S6B [Hevea brasiliensis]          56   3e-06
gb|ADR71291.1| 40S ribosomal protein S6A [Hevea brasiliensis]          56   3e-06
ref|XP_002513953.1| 40S ribosomal protein S6, putative [Ricinus ...    55   4e-06
ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform ...    55   6e-06

>ref|XP_004133785.1| PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus]
           gi|449477988|ref|XP_004155185.1| PREDICTED: 40S
           ribosomal protein S6-like [Cucumis sativus]
          Length = 250

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +1

Query: 1   SRLKEQRERRSESLAKRRSKLSAASKPSVTAA 96
           SRLKEQRERRSESLAK+RS+LSAASKPS+ AA
Sbjct: 219 SRLKEQRERRSESLAKKRSRLSAASKPSIAAA 250


>gb|ADR71292.1| 40S ribosomal protein S6B [Hevea brasiliensis]
          Length = 249

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +1

Query: 1   SRLKEQRERRSESLAKRRSKLSAASKPSVTA 93
           +RLKEQRERRSESLAKRRSKLSAASKPSV A
Sbjct: 219 TRLKEQRERRSESLAKRRSKLSAASKPSVVA 249


>gb|ADR71291.1| 40S ribosomal protein S6A [Hevea brasiliensis]
          Length = 249

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +1

Query: 1   SRLKEQRERRSESLAKRRSKLSAASKPSVTA 93
           +RLKEQRERRSESLAKRRSKLSAASKPSV A
Sbjct: 219 TRLKEQRERRSESLAKRRSKLSAASKPSVVA 249


>ref|XP_002513953.1| 40S ribosomal protein S6, putative [Ricinus communis]
           gi|223547039|gb|EEF48536.1| 40S ribosomal protein S6,
           putative [Ricinus communis]
          Length = 249

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/31 (87%), Positives = 31/31 (100%)
 Frame = +1

Query: 1   SRLKEQRERRSESLAKRRSKLSAASKPSVTA 93
           SRLKEQRERRSESLAK+RS+LS+ASKPS+TA
Sbjct: 219 SRLKEQRERRSESLAKKRSRLSSASKPSITA 249


>ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
           gi|296087487|emb|CBI34076.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +1

Query: 1   SRLKEQRERRSESLAKRRSKLSAASKPSVTA 93
           +RLKEQRERRSESLAKRRS+LSAASKPSV A
Sbjct: 219 TRLKEQRERRSESLAKRRSRLSAASKPSVAA 249


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