BLASTX nr result

ID: Dioscorea21_contig00002122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002122
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23720.3| unnamed protein product [Vitis vinifera]              302   6e-80
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri...   295   7e-78
ref|XP_002311696.1| predicted protein [Populus trichocarpa] gi|1...   292   5e-77
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261...   291   8e-77
ref|XP_002314506.1| predicted protein [Populus trichocarpa] gi|2...   287   2e-75

>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  302 bits (773), Expect = 6e-80
 Identities = 149/215 (69%), Positives = 179/215 (83%), Gaps = 8/215 (3%)
 Frame = -1

Query: 770 RISCIVAQEQTVG----EQDQLVVEQESTIPL----PPSSQSTKLYFGNLPYNCDSAQLA 615
           RIS  VAQE+       E++Q   ++E    L      S  +TKLYFGNLPY+CDSAQLA
Sbjct: 69  RISAAVAQEEAAATAPVEEEQQQGQEEGEQVLREEGAESPVNTKLYFGNLPYSCDSAQLA 128

Query: 614 GIIQQVADPEMVEVLYDRDTGKSRGFAFVTMSCIEDCEAVIKNLDRSQFGGRTMRVNFAD 435
           GIIQ    PE+VEVLY+RDTG+SRGFAFVTMS +EDC AVI+NLD S++GGRT+RVNF+D
Sbjct: 129 GIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSD 188

Query: 434 RPQPKEPLYPETEFKLFVGNLSWSVTAESLSGVFQEYGNVVGARILYDGDTGRSRGYGFV 255
           +P+PK PLYPETE+KLFVGNLSWSVT+ESL+ VFQEYGNV+GAR+LYDG+TGRSRGYGFV
Sbjct: 189 KPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFV 248

Query: 254 CYSTKEEMDAAIEQLNGVELEGRAMRVSVAQGKKS 150
           CYSTK EMD A+E LNGVELEGRA+R+S+AQG++S
Sbjct: 249 CYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283


>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532218|gb|EEF34022.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 285

 Score =  295 bits (755), Expect = 7e-78
 Identities = 149/215 (69%), Positives = 172/215 (80%), Gaps = 9/215 (4%)
 Frame = -1

Query: 767 ISCIVAQEQTV-------GEQDQLVVEQESTIPLPPSSQ--STKLYFGNLPYNCDSAQLA 615
           +S  VAQE+          EQ Q+  E E+     P +   +TKLYFGNLPYN DSAQLA
Sbjct: 71  VSAAVAQEEAAVTAPVEEDEQQQVAEEGEAEPEAEPEAAPINTKLYFGNLPYNVDSAQLA 130

Query: 614 GIIQQVADPEMVEVLYDRDTGKSRGFAFVTMSCIEDCEAVIKNLDRSQFGGRTMRVNFAD 435
           GIIQ    PE+VEVLYDRDTG+SRGFAFVTMS +EDC AVI+NLD SQF GR +RVNF+D
Sbjct: 131 GIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIENLDGSQFMGRILRVNFSD 190

Query: 434 RPQPKEPLYPETEFKLFVGNLSWSVTAESLSGVFQEYGNVVGARILYDGDTGRSRGYGFV 255
           +P+PKEPLYPETE KLFVGNLSWSVT+ESL   FQEYGN+VGAR+LYDG+TGRSRGYGFV
Sbjct: 191 KPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFV 250

Query: 254 CYSTKEEMDAAIEQLNGVELEGRAMRVSVAQGKKS 150
           CY+T+ EM+ A+  LNGVELEGRAMRVS+AQGKKS
Sbjct: 251 CYATRSEMENALVSLNGVELEGRAMRVSLAQGKKS 285


>ref|XP_002311696.1| predicted protein [Populus trichocarpa] gi|118486835|gb|ABK95252.1|
           unknown [Populus trichocarpa]
           gi|222851516|gb|EEE89063.1| predicted protein [Populus
           trichocarpa]
          Length = 279

 Score =  292 bits (748), Expect = 5e-77
 Identities = 142/202 (70%), Positives = 170/202 (84%)
 Frame = -1

Query: 755 VAQEQTVGEQDQLVVEQESTIPLPPSSQSTKLYFGNLPYNCDSAQLAGIIQQVADPEMVE 576
           +A  +T GE DQ+ V             +TKLYFGNLPYN DSAQLAG+IQ+   PEMVE
Sbjct: 91  LASGETEGEADQVPV-------------NTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVE 137

Query: 575 VLYDRDTGKSRGFAFVTMSCIEDCEAVIKNLDRSQFGGRTMRVNFADRPQPKEPLYPETE 396
           VLY R+TG+SRGFAFVTMS IEDCE VI+NLD SQ+ GR +RVNFAD+P+PKEPLYPETE
Sbjct: 138 VLYHRETGRSRGFAFVTMSSIEDCETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETE 197

Query: 395 FKLFVGNLSWSVTAESLSGVFQEYGNVVGARILYDGDTGRSRGYGFVCYSTKEEMDAAIE 216
           +KLF+GNLSWSVT+ESL+  FQEYGNVVGAR+LYDG+TG+SRGYGFVCYSTKEE++ A++
Sbjct: 198 YKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQ 257

Query: 215 QLNGVELEGRAMRVSVAQGKKS 150
            LNGVELEGRA+RVS+A+G+KS
Sbjct: 258 SLNGVELEGRALRVSLAEGRKS 279


>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
          Length = 751

 Score =  291 bits (746), Expect = 8e-77
 Identities = 145/207 (70%), Positives = 171/207 (82%), Gaps = 8/207 (3%)
 Frame = -1

Query: 770 RISCIVAQEQTVG----EQDQLVVEQESTIPL----PPSSQSTKLYFGNLPYNCDSAQLA 615
           RIS  VAQE+       E++Q   ++E    L      S  +TKLYFGNLPY+CDSAQLA
Sbjct: 69  RISAAVAQEEAAATAPVEEEQQQGQEEGEQVLREEGAESPVNTKLYFGNLPYSCDSAQLA 128

Query: 614 GIIQQVADPEMVEVLYDRDTGKSRGFAFVTMSCIEDCEAVIKNLDRSQFGGRTMRVNFAD 435
           GIIQ    PE+VEVLY+RDTG+SRGFAFVTMS +EDC AVI+NLD S++GGRT+RVNF+D
Sbjct: 129 GIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSD 188

Query: 434 RPQPKEPLYPETEFKLFVGNLSWSVTAESLSGVFQEYGNVVGARILYDGDTGRSRGYGFV 255
           +P+PK PLYPETE+KLFVGNLSWSVT+ESL+ VFQEYGNV+GAR+LYDG+TGRSRGYGFV
Sbjct: 189 KPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFV 248

Query: 254 CYSTKEEMDAAIEQLNGVELEGRAMRV 174
           CYSTK EMD A+E LNGVELEGRA+RV
Sbjct: 249 CYSTKAEMDTALESLNGVELEGRAIRV 275



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 35/80 (43%), Positives = 51/80 (63%)
 Frame = -1

Query: 392 KLFVGNLSWSVTAESLSGVFQEYGNVVGARILYDGDTGRSRGYGFVCYSTKEEMDAAIEQ 213
           KL+ GNL +S  +  L+G+ Q YG+     +LY+ DTGRSRG+ FV  S+ E+ +A IE 
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 212 LNGVELEGRAMRVSVAQGKK 153
           L+G E  GR +RV+ +   K
Sbjct: 172 LDGSEYGGRTLRVNFSDKPK 191


>ref|XP_002314506.1| predicted protein [Populus trichocarpa] gi|222863546|gb|EEF00677.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  287 bits (735), Expect = 2e-75
 Identities = 145/214 (67%), Positives = 173/214 (80%), Gaps = 7/214 (3%)
 Frame = -1

Query: 770 RISCIVAQEQTVG-----EQDQLVVEQES--TIPLPPSSQSTKLYFGNLPYNCDSAQLAG 612
           R+S  VAQE+        E+++L  E+    T  +P +   TKLYFGNLPYN DSAQLAG
Sbjct: 69  RVSASVAQEEAPATASAVEEEELASEEAKGETNEIPVN---TKLYFGNLPYNVDSAQLAG 125

Query: 611 IIQQVADPEMVEVLYDRDTGKSRGFAFVTMSCIEDCEAVIKNLDRSQFGGRTMRVNFADR 432
           IIQ+   PEMVEVLY R+TG+SRGFAFVTMS IEDC AVI+NLD SQ+ GR +RVNF+D 
Sbjct: 126 IIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVIENLDESQYMGRILRVNFSDN 185

Query: 431 PQPKEPLYPETEFKLFVGNLSWSVTAESLSGVFQEYGNVVGARILYDGDTGRSRGYGFVC 252
           P+PKEPLYPETE+KLFVGNLSWS T+ESL+  FQEYGNVVGAR+LYDG+TG+SRGYGFVC
Sbjct: 186 PKPKEPLYPETEYKLFVGNLSWSATSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVC 245

Query: 251 YSTKEEMDAAIEQLNGVELEGRAMRVSVAQGKKS 150
           YSTK EM  A+  L+GVELEGRA+RVS+A+G+KS
Sbjct: 246 YSTKAEMQTALVSLDGVELEGRALRVSLAEGRKS 279


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