BLASTX nr result
ID: Dioscorea21_contig00002121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002121
(3162 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi... 774 0.0
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu... 743 0.0
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,... 729 0.0
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi... 729 0.0
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi... 729 0.0
>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein
VITISV_038804 [Vitis vinifera]
Length = 567
Score = 774 bits (1999), Expect = 0.0
Identities = 375/566 (66%), Positives = 455/566 (80%)
Frame = +3
Query: 1056 FLSYLPEIHTPSLTHGFSKVLGSSSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKDQ 1235
F S +P +HT SL GFS+VL S+ +T KD
Sbjct: 25 FFSQVPNLHTLSLNKGFSRVLASTQITISP---------------------------KDN 57
Query: 1236 PFSLPSWKTSKNDLKSKELKLHDAFLYLEYMVNRGHKPDTSQATQLLYDLCKANKVRKAI 1415
F+LP+W++ KND ++++L+L+DAFLYLEYM+ +GHKPD QATQL+Y+LCK+NK+RKA
Sbjct: 58 VFTLPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKAT 117
Query: 1416 HVMELLVKSGNTPDCSVYTFLVNQLCKRGSVGYAMQLVDKMHQYGVTPSTVTYNSLVRGL 1595
VMEL++ SG TPD + TFLVN LCKRG+VGYAMQLV+KM +YG +TVTYNSLVRGL
Sbjct: 118 KVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGL 177
Query: 1596 CVHGNLQQSLQLLERLMQRGLVPNVFTFSFLLEAAYKERGVDEAVRLLDEIIAKGGKPNL 1775
C+HGNL QSLQ+L++ M++GLVPNVFT+SFLLEAAYKERG DEA+RLLDEI+AKGGKPNL
Sbjct: 178 CMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNL 237
Query: 1776 VSYNVLLTGFCKEGRLEEAMKFFRELPYKGFSPNVVSYNILLRSLCYNGQWTEAEELLTE 1955
VSYNVLLTG CKEGR EEAM+FFR+LP KGFSPNVVSYNILLRSLCY G+W +A+ELL E
Sbjct: 238 VSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAE 297
Query: 1956 MGNNGCEPSIITYNILIGSLALHGKPEQALEILEELLDKRYKPVAASYNPIIAWYCKQGR 2135
M PSI+T+NILIGSLALHG+ +QALE+L+++ R+K AASYNPIIA CK+G+
Sbjct: 298 MDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGK 357
Query: 2136 LDMVVKCLDMMMYRHCTPNDGTYNAIAVLCGEGKVEECFSILQSLGNKQNVSMHDYHRNV 2315
+D+VVKCLD MMYR C PN+GTYNAIAVLC EGKV+E FSI+QSLGNKQN S HD+++ V
Sbjct: 358 VDLVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGV 417
Query: 2316 VSLLCKKGNTLAAFQLLNEMTKSGFTPDSYTYSSLIRGLCMEGMLDEALEIIQVMEESGC 2495
+S LC+KGNT AFQLL EMTK GF PDSYTYSSLIRGLC EGMLDEA+EI +MEE+ C
Sbjct: 418 ISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYC 477
Query: 2496 KPDVDNYNALILGLCKAQRTDLAFDVFETMVDKGYSPNETTYTILVEGIAHEDEADLARE 2675
+PDVDN+NALILGLCK ++TDL+ VFE MV KGY PNETTYTI+VEGIAH++E +LA
Sbjct: 478 RPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAA 537
Query: 2676 VLKELYVRNAVSQGTMERITLQYDLE 2753
VLKELY+R AV + T+ER+ +QYDLE
Sbjct: 538 VLKELYLRQAVGRSTLERLVMQYDLE 563
>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 743 bits (1918), Expect = 0.0
Identities = 371/565 (65%), Positives = 442/565 (78%)
Frame = +3
Query: 1056 FLSYLPEIHTPSLTHGFSKVLGSSSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKDQ 1235
F S++P + SL GFSKVL S+ +T KD
Sbjct: 25 FFSHIPNLQKLSLNKGFSKVLASTQITISP---------------------------KDT 57
Query: 1236 PFSLPSWKTSKNDLKSKELKLHDAFLYLEYMVNRGHKPDTSQATQLLYDLCKANKVRKAI 1415
F+LP+WKT K + KSKEL+L DAF +LE+MV +G KPD QATQLLYDLCKA K+RKAI
Sbjct: 58 IFTLPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAI 117
Query: 1416 HVMELLVKSGNTPDCSVYTFLVNQLCKRGSVGYAMQLVDKMHQYGVTPSTVTYNSLVRGL 1595
VME+++ SG PD S YTFLV+ LC++G+VGYAMQLVDKM +YG +TVTYNSLVRGL
Sbjct: 118 KVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGL 177
Query: 1596 CVHGNLQQSLQLLERLMQRGLVPNVFTFSFLLEAAYKERGVDEAVRLLDEIIAKGGKPNL 1775
C+HGNL QSLQLL+RL+Q+GLVPN +T+SFLLEAAYKERG DEA +LLDEIIAKGG+PNL
Sbjct: 178 CMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNL 237
Query: 1776 VSYNVLLTGFCKEGRLEEAMKFFRELPYKGFSPNVVSYNILLRSLCYNGQWTEAEELLTE 1955
VSYNVLLTG CKEGR E+A++ FRELP KGFSPNVVSYNILLRSLC G+W EA LL E
Sbjct: 238 VSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAE 297
Query: 1956 MGNNGCEPSIITYNILIGSLALHGKPEQALEILEELLDKRYKPVAASYNPIIAWYCKQGR 2135
M + PS +TYNILIGSLALHG+ E ALE+LEE++ R+KP A+SYNPIIA CK G+
Sbjct: 298 MNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGK 357
Query: 2136 LDMVVKCLDMMMYRHCTPNDGTYNAIAVLCGEGKVEECFSILQSLGNKQNVSMHDYHRNV 2315
LD+VVKCLD MMYRHC PN+GTYNAIA LC EG V+E FSI+QSLGNKQ+ S ++++ V
Sbjct: 358 LDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIV 417
Query: 2316 VSLLCKKGNTLAAFQLLNEMTKSGFTPDSYTYSSLIRGLCMEGMLDEALEIIQVMEESGC 2495
++ LC+KGNT AFQLL EMTK GFTPDS+TYSSLIRGLCMEGML+EA+EI VMEE+
Sbjct: 418 ITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN- 476
Query: 2496 KPDVDNYNALILGLCKAQRTDLAFDVFETMVDKGYSPNETTYTILVEGIAHEDEADLARE 2675
KPD +NYN+LILG CK++RTDLA DVFE MV KGY PNETTYTILVEGI HE E DLA +
Sbjct: 477 KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATK 536
Query: 2676 VLKELYVRNAVSQGTMERITLQYDL 2750
VL+EL +R+ +SQ T+ER+ +QYDL
Sbjct: 537 VLRELQLRDVISQSTLERLVMQYDL 561
>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 567
Score = 729 bits (1883), Expect = 0.0
Identities = 351/566 (62%), Positives = 445/566 (78%)
Frame = +3
Query: 1056 FLSYLPEIHTPSLTHGFSKVLGSSSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKDQ 1235
F S++P +H+ SL F++VL S+ +T KD
Sbjct: 25 FFSHIPNLHSFSLNKDFTRVLASTQITISP---------------------------KDS 57
Query: 1236 PFSLPSWKTSKNDLKSKELKLHDAFLYLEYMVNRGHKPDTSQATQLLYDLCKANKVRKAI 1415
+LP+W++ KND +++++++ DAF +LE++V GHKPD QATQLLYDLCK+NK++KAI
Sbjct: 58 VITLPNWRSGKNDQRNRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAI 117
Query: 1416 HVMELLVKSGNTPDCSVYTFLVNQLCKRGSVGYAMQLVDKMHQYGVTPSTVTYNSLVRGL 1595
VME+++ G PD + YTFLVN LCKRG+VGYAMQLV+KM G +TVTYN+LV+GL
Sbjct: 118 RVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGL 177
Query: 1596 CVHGNLQQSLQLLERLMQRGLVPNVFTFSFLLEAAYKERGVDEAVRLLDEIIAKGGKPNL 1775
C+HGNL +SLQ L+RLMQ+GLVPN FT+S LLEAAYKERGV+EA+RLLDEIIAKGG+PNL
Sbjct: 178 CMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNL 237
Query: 1776 VSYNVLLTGFCKEGRLEEAMKFFRELPYKGFSPNVVSYNILLRSLCYNGQWTEAEELLTE 1955
VSYNVLLTG CKEGR+EEA++ F+ LP KGFSPNVVSYNILLRSLCY G+W EA ELL E
Sbjct: 238 VSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAE 297
Query: 1956 MGNNGCEPSIITYNILIGSLALHGKPEQALEILEELLDKRYKPVAASYNPIIAWYCKQGR 2135
M PSI+TYNILIGSLA HGK EQAL++++E++ +KP A SYNPIIA CK+G+
Sbjct: 298 MNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGK 357
Query: 2136 LDMVVKCLDMMMYRHCTPNDGTYNAIAVLCGEGKVEECFSILQSLGNKQNVSMHDYHRNV 2315
++ VV CLD M++ C+PN+GT+NAIAVLC EGKV+E FS++QSLGNKQN S+HDY++ V
Sbjct: 358 VEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGV 417
Query: 2316 VSLLCKKGNTLAAFQLLNEMTKSGFTPDSYTYSSLIRGLCMEGMLDEALEIIQVMEESGC 2495
VS LCKKGNT AF LL EMTK GFTPDSYTYSSLIRGLC+EGML EA+EI +++EE
Sbjct: 418 VSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHY 477
Query: 2496 KPDVDNYNALILGLCKAQRTDLAFDVFETMVDKGYSPNETTYTILVEGIAHEDEADLARE 2675
+PD+DN+NALILG CK+ RTDL+ +VFE M++KGY+P+ETTYTILVEGI HE+E +LA E
Sbjct: 478 RPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAE 537
Query: 2676 VLKELYVRNAVSQGTMERITLQYDLE 2753
VL+EL++R +SQ T+ER+ +QYDLE
Sbjct: 538 VLRELHLRQVMSQSTVERLIMQYDLE 563
>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 729 bits (1882), Expect = 0.0
Identities = 366/565 (64%), Positives = 436/565 (77%)
Frame = +3
Query: 1056 FLSYLPEIHTPSLTHGFSKVLGSSSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKDQ 1235
F S++P I SL GFSKVL S+ +T KD
Sbjct: 25 FFSHIPNIQKLSLNKGFSKVLASTQITISP---------------------------KDT 57
Query: 1236 PFSLPSWKTSKNDLKSKELKLHDAFLYLEYMVNRGHKPDTSQATQLLYDLCKANKVRKAI 1415
F+LP+WK K D KSKEL+L+DAF +LE+MV +G KPD QATQLLYDLCK K+RKAI
Sbjct: 58 IFTLPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAI 117
Query: 1416 HVMELLVKSGNTPDCSVYTFLVNQLCKRGSVGYAMQLVDKMHQYGVTPSTVTYNSLVRGL 1595
VME+++ SG PD + YTFLV+ LC++G+VGYAMQLVDKM +YG +T TYNSLVRGL
Sbjct: 118 KVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGL 177
Query: 1596 CVHGNLQQSLQLLERLMQRGLVPNVFTFSFLLEAAYKERGVDEAVRLLDEIIAKGGKPNL 1775
C+HGNL QSLQLL+RL+Q+GLVPN +T+SFLLEAAYKERG DEA +LLDEIIAKGGKPNL
Sbjct: 178 CMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNL 237
Query: 1776 VSYNVLLTGFCKEGRLEEAMKFFRELPYKGFSPNVVSYNILLRSLCYNGQWTEAEELLTE 1955
VSYNVLLTG CKEGR E+AM+ FRELP KGFSPNVVSYNILLRSLC G+W EA LL E
Sbjct: 238 VSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAE 297
Query: 1956 MGNNGCEPSIITYNILIGSLALHGKPEQALEILEELLDKRYKPVAASYNPIIAWYCKQGR 2135
M + PS +TYNILIGSL LHG+ E ALE+LEE++ R+KP A+SYNPIIA CK +
Sbjct: 298 MDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRK 357
Query: 2136 LDMVVKCLDMMMYRHCTPNDGTYNAIAVLCGEGKVEECFSILQSLGNKQNVSMHDYHRNV 2315
+D+VVKCLD MMYRHC PN+GTYNAIA LC EG V+E FSI+QSLGNKQ+ S ++++ V
Sbjct: 358 VDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIV 417
Query: 2316 VSLLCKKGNTLAAFQLLNEMTKSGFTPDSYTYSSLIRGLCMEGMLDEALEIIQVMEESGC 2495
++ LC+KGNT AFQLL EMTK GFTPDS+TYSSLIRGLCMEGML+EA+EI VMEE+
Sbjct: 418 ITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-I 476
Query: 2496 KPDVDNYNALILGLCKAQRTDLAFDVFETMVDKGYSPNETTYTILVEGIAHEDEADLARE 2675
K D +NYN+LILG CK++RTDLA DVFE MV KGY NETTYTILVEGI HE E DLA E
Sbjct: 477 KLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATE 536
Query: 2676 VLKELYVRNAVSQGTMERITLQYDL 2750
VL+EL +R+ ++Q T+ER+ +QYDL
Sbjct: 537 VLRELQLRDVINQSTVERLVMQYDL 561
>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 729 bits (1881), Expect = 0.0
Identities = 366/565 (64%), Positives = 436/565 (77%)
Frame = +3
Query: 1056 FLSYLPEIHTPSLTHGFSKVLGSSSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKDQ 1235
F S++P I SL GFSKVL S+ +T KD
Sbjct: 25 FFSHIPNIQKLSLNKGFSKVLASTQITISP---------------------------KDT 57
Query: 1236 PFSLPSWKTSKNDLKSKELKLHDAFLYLEYMVNRGHKPDTSQATQLLYDLCKANKVRKAI 1415
F+LP+WK K D KSKEL+L+DAF +LE+MV +G KPD QATQLLYDLCK K+RKAI
Sbjct: 58 IFTLPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAI 117
Query: 1416 HVMELLVKSGNTPDCSVYTFLVNQLCKRGSVGYAMQLVDKMHQYGVTPSTVTYNSLVRGL 1595
VME+++ SG PD + YTFLV+ LC++G+VGYAMQLVDKM +YG +T TYNSLVRGL
Sbjct: 118 KVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGL 177
Query: 1596 CVHGNLQQSLQLLERLMQRGLVPNVFTFSFLLEAAYKERGVDEAVRLLDEIIAKGGKPNL 1775
C+HGNL QSLQLL+RL+Q+GLVPN +T+SFLLEAAYKERG DEA +LLDEIIAKGGKPNL
Sbjct: 178 CMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNL 237
Query: 1776 VSYNVLLTGFCKEGRLEEAMKFFRELPYKGFSPNVVSYNILLRSLCYNGQWTEAEELLTE 1955
VSYNVLLTG CKEGR E+AM+ FRELP KGFSPNVVSYNILLRSLC G+W EA LL E
Sbjct: 238 VSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAE 297
Query: 1956 MGNNGCEPSIITYNILIGSLALHGKPEQALEILEELLDKRYKPVAASYNPIIAWYCKQGR 2135
M + PS +TYNILIGSL LHG+ E ALE+LEE++ R+KP A+SYNPIIA CK +
Sbjct: 298 MDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRK 357
Query: 2136 LDMVVKCLDMMMYRHCTPNDGTYNAIAVLCGEGKVEECFSILQSLGNKQNVSMHDYHRNV 2315
+D+VVKCLD MMYRHC PN+GTYNAIA LC EG V+E FSI+QSLGNKQ+ S ++++ V
Sbjct: 358 VDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIV 417
Query: 2316 VSLLCKKGNTLAAFQLLNEMTKSGFTPDSYTYSSLIRGLCMEGMLDEALEIIQVMEESGC 2495
++ LC+KGNT AFQLL EMTK GFTPDS+TYSSLIRGLCMEGML+EA+EI VMEE+
Sbjct: 418 ITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-I 476
Query: 2496 KPDVDNYNALILGLCKAQRTDLAFDVFETMVDKGYSPNETTYTILVEGIAHEDEADLARE 2675
K D +NYN+LILG CK++RTDLA DVFE MV KGY NETTYTILVEGI HE E DLA E
Sbjct: 477 KLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATE 536
Query: 2676 VLKELYVRNAVSQGTMERITLQYDL 2750
VL+EL +R+ ++Q T+ER+ +QYDL
Sbjct: 537 VLRELQLRDVINQSTVERLIMQYDL 561