BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002116
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   189   7e-46
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   188   2e-45
gb|ABK22805.1| unknown [Picea sitchensis]                             183   7e-44
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   182   1e-43
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447...   181   2e-43

>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  189 bits (481), Expect = 7e-46
 Identities = 99/128 (77%), Positives = 105/128 (82%)
 Frame = +2

Query: 308 MSGAGLEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDL 487
           MS AG ED++LSTSLASY                 ILRSFDQFANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 488 YCDIPLGLYVIRGENVVLIGELDLEKEELPARMISVSAAEIKRAQKAERDSTDLKGSMRK 667
           YCDIPLGLY+IRGENVVLIGELDLEKEELP  M  VSAAEI+RAQKAERD+TDLKG+MRK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 668 RMEFLDLD 691
           RMEFLDLD
Sbjct: 121 RMEFLDLD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  188 bits (477), Expect = 2e-45
 Identities = 99/128 (77%), Positives = 105/128 (82%)
 Frame = +2

Query: 308 MSGAGLEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDL 487
           MS AG ED++LSTSLASY                 ILRSFDQFANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 488 YCDIPLGLYVIRGENVVLIGELDLEKEELPARMISVSAAEIKRAQKAERDSTDLKGSMRK 667
           YCDIPLGLYVIRGENVVLIGELDLEKEELP  M  VSAAEIKRAQKAER+++DLKG+MRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 668 RMEFLDLD 691
           RMEFLDLD
Sbjct: 121 RMEFLDLD 128


>gb|ABK22805.1| unknown [Picea sitchensis]
          Length = 172

 Score =  183 bits (464), Expect = 7e-44
 Identities = 97/128 (75%), Positives = 103/128 (80%)
 Frame = +2

Query: 308 MSGAGLEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDL 487
           MS AG ED+FLSTSLASY                 ILRSFDQFANAVLE A ER+IVGDL
Sbjct: 45  MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLIGILRSFDQFANAVLENALERIIVGDL 104

Query: 488 YCDIPLGLYVIRGENVVLIGELDLEKEELPARMISVSAAEIKRAQKAERDSTDLKGSMRK 667
           YCD+PLGLYVIRGENVVLIGELD E+EELPA MI VSA EIKRAQKAERD+TDLKGSMRK
Sbjct: 105 YCDLPLGLYVIRGENVVLIGELDPEREELPANMIHVSATEIKRAQKAERDATDLKGSMRK 164

Query: 668 RMEFLDLD 691
           RMEFLDL+
Sbjct: 165 RMEFLDLE 172


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  182 bits (461), Expect = 1e-43
 Identities = 95/128 (74%), Positives = 102/128 (79%)
 Frame = +2

Query: 308 MSGAGLEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDL 487
           MS AG ED++LSTSLASY                  LRSFDQFANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 488 YCDIPLGLYVIRGENVVLIGELDLEKEELPARMISVSAAEIKRAQKAERDSTDLKGSMRK 667
           YCDIPLGLYVIRGENVVLIGELDLE+EELP  M  VS AEIKRAQKAER+++DLKG+MRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 668 RMEFLDLD 691
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  181 bits (460), Expect = 2e-43
 Identities = 96/128 (75%), Positives = 102/128 (79%)
 Frame = +2

Query: 308 MSGAGLEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDL 487
           MS AG +D+FLSTSLA+Y                 ILRSFDQFAN VLEGACERVIVGDL
Sbjct: 1   MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60

Query: 488 YCDIPLGLYVIRGENVVLIGELDLEKEELPARMISVSAAEIKRAQKAERDSTDLKGSMRK 667
           YCDI LGLYVIRGENVVLIGELDLEKEELP+ M  VS AEIKRAQKAER++TDLKGSMRK
Sbjct: 61  YCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRK 120

Query: 668 RMEFLDLD 691
           RMEFLD D
Sbjct: 121 RMEFLDFD 128