BLASTX nr result

ID: Dioscorea21_contig00002101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002101
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...    96   9e-18
emb|CBI35689.3| unnamed protein product [Vitis vinifera]               96   9e-18
ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|2...    96   9e-18
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]    96   9e-18
ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...    94   5e-17

>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
            [Vitis vinifera]
          Length = 860

 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 52/97 (53%), Positives = 64/97 (65%)
 Frame = +2

Query: 5    PSLSANTDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXXKSMLGQFTQKRLG 184
            P LS+N+    EI AQVE+ GQ+LGKG G+TW               KSMLGQF+QKR G
Sbjct: 764  PPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQFSQKRQG 823

Query: 185  SPRSLHSFPNKRLKAEFSRVVQQIPSSNRYSKHDTPV 295
            SPRSL     KRLK+EF+R +Q+ PSS RYSK+ +PV
Sbjct: 824  SPRSLQGM-GKRLKSEFTRGLQRTPSSGRYSKNTSPV 859


>emb|CBI35689.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 52/97 (53%), Positives = 64/97 (65%)
 Frame = +2

Query: 5   PSLSANTDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXXKSMLGQFTQKRLG 184
           P LS+N+    EI AQVE+ GQ+LGKG G+TW               KSMLGQF+QKR G
Sbjct: 64  PPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQFSQKRQG 123

Query: 185 SPRSLHSFPNKRLKAEFSRVVQQIPSSNRYSKHDTPV 295
           SPRSL     KRLK+EF+R +Q+ PSS RYSK+ +PV
Sbjct: 124 SPRSLQGM-GKRLKSEFTRGLQRTPSSGRYSKNTSPV 159


>ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|222870825|gb|EEF07956.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 48/95 (50%), Positives = 62/95 (65%)
 Frame = +2

Query: 11  LSANTDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXXKSMLGQFTQKRLGSP 190
           LSAN+    E++AQVE+ GQ+LGKGIG+TW               ++M GQ+TQKR GSP
Sbjct: 129 LSANSIPGEEVHAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRTMFGQYTQKRQGSP 188

Query: 191 RSLHSFPNKRLKAEFSRVVQQIPSSNRYSKHDTPV 295
           R +   PNKRLK EF RV+Q++P S RY K+  PV
Sbjct: 189 RPMQGMPNKRLKQEFPRVLQRMPPSARYHKNAPPV 223


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 52/97 (53%), Positives = 64/97 (65%)
 Frame = +2

Query: 5    PSLSANTDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXXKSMLGQFTQKRLG 184
            P LS+N+    EI AQVE+ GQ+LGKG G+TW               KSMLGQF+QKR G
Sbjct: 798  PPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQFSQKRQG 857

Query: 185  SPRSLHSFPNKRLKAEFSRVVQQIPSSNRYSKHDTPV 295
            SPRSL     KRLK+EF+R +Q+ PSS RYSK+ +PV
Sbjct: 858  SPRSLQGM-GKRLKSEFTRGLQRTPSSGRYSKNTSPV 893


>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 47/95 (49%), Positives = 61/95 (64%)
 Frame = +2

Query: 11   LSANTDSIGEINAQVEVAGQILGKGIGTTWXXXXXXXXXXXXXXXKSMLGQFTQKRLGSP 190
            LS N+    E++AQVE+ GQ+LGKGIG TW               ++M GQ+T KR GSP
Sbjct: 872  LSTNSIPGEEVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSP 931

Query: 191  RSLHSFPNKRLKAEFSRVVQQIPSSNRYSKHDTPV 295
            R +   PNKRLK EF RV+Q++PSS RY K+ +PV
Sbjct: 932  RLMQGMPNKRLKQEFPRVLQRMPSSARYHKNASPV 966


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