BLASTX nr result

ID: Dioscorea21_contig00002094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002094
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC75796.1| hypothetical protein OsI_12727 [Oryza sativa Indi...    94   4e-17
ref|NP_001050716.1| Os03g0634000 [Oryza sativa Japonica Group] g...    94   4e-17
ref|XP_002464206.1| hypothetical protein SORBIDRAFT_01g014100 [S...    92   1e-16
ref|XP_004135654.1| PREDICTED: sec-independent protein transloca...    90   8e-16
ref|NP_001104942.1| sec-independent protein translocase protein ...    89   1e-15

>gb|EEC75796.1| hypothetical protein OsI_12727 [Oryza sativa Indica Group]
          Length = 171

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 55/94 (58%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
 Frame = +2

Query: 140 SGSLASTNSVFFSNGAGAXXXXXXXXXXXXTRGVAGVGTPSRG---LSVRCLFGLGVPEL 310
           +  ++S  S F + GAG              R  AG G  SRG   +  +CLFGLGVPEL
Sbjct: 39  AAGMSSRASSFVTGGAGGLAVAVA------ARTRAGSGAGSRGGGAMGCKCLFGLGVPEL 92

Query: 311 AVIAGVAALVFGPKKLPEIGRSIGKTVKSFQQAA 412
            VIAGVAALVFGPK+LPEIGRSIGKTVKSFQQAA
Sbjct: 93  VVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAA 126


>ref|NP_001050716.1| Os03g0634000 [Oryza sativa Japonica Group]
           gi|75226284|sp|Q75GK3.1|TATA_ORYSJ RecName:
           Full=Sec-independent protein translocase protein TATA,
           chloroplastic; AltName: Full=Protein THYLAKOID ASSEMBLY
           4; AltName: Full=Protein TWIN-ARGININE TRANSLOCATION A;
           Flags: Precursor gi|41469490|gb|AAS07275.1| putative
           sec-independent protein transporter [Oryza sativa
           Japonica Group] gi|108709978|gb|ABF97773.1|
           twin-arginine translocation protein, TatA/E family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113549187|dbj|BAF12630.1| Os03g0634000 [Oryza sativa
           Japonica Group] gi|215686563|dbj|BAG88816.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222625415|gb|EEE59547.1| hypothetical protein
           OsJ_11824 [Oryza sativa Japonica Group]
          Length = 170

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 55/94 (58%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
 Frame = +2

Query: 140 SGSLASTNSVFFSNGAGAXXXXXXXXXXXXTRGVAGVGTPSRG---LSVRCLFGLGVPEL 310
           +  ++S  S F + GAG              R  AG G  SRG   +  +CLFGLGVPEL
Sbjct: 39  AAGMSSRASSFVTGGAGGLAVAVA------ARTRAGSGAGSRGGGAMGCKCLFGLGVPEL 92

Query: 311 AVIAGVAALVFGPKKLPEIGRSIGKTVKSFQQAA 412
            VIAGVAALVFGPK+LPEIGRSIGKTVKSFQQAA
Sbjct: 93  VVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAA 126


>ref|XP_002464206.1| hypothetical protein SORBIDRAFT_01g014100 [Sorghum bicolor]
           gi|241918060|gb|EER91204.1| hypothetical protein
           SORBIDRAFT_01g014100 [Sorghum bicolor]
          Length = 173

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 55/94 (58%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
 Frame = +2

Query: 140 SGSLASTNSVFFSNGAGAXXXXXXXXXXXXTRGVAGVGTPSRG---LSVRCLFGLGVPEL 310
           +  ++S  S F   G G              R  AG    SRG   L  +CLFGLGVPEL
Sbjct: 40  AAGMSSRASSFVGGGGGGGLAAVAASVAARPRSGAG----SRGGGALGCKCLFGLGVPEL 95

Query: 311 AVIAGVAALVFGPKKLPEIGRSIGKTVKSFQQAA 412
           AVIAGVAALVFGPK+LPEIGRSIGKTVKSFQQAA
Sbjct: 96  AVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAA 129


>ref|XP_004135654.1| PREDICTED: sec-independent protein translocase protein TATA,
           chloroplastic-like [Cucumis sativus]
          Length = 158

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 54/116 (46%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
 Frame = +2

Query: 77  MACSSTSLXXXXXXXXXXXXFSGSLASTNSVFFSNGAGAXXXXXXXXXXXXTRGVAGVGT 256
           M  SS +L             S S +S+ S FF+N A                 +    T
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 257 PSR----GLSVRCLFGLGVPELAVIAGVAALVFGPKKLPEIGRSIGKTVKSFQQAA 412
            ++    G +   LFGLGVPEL VIAGVAALVFGPKKLPE+G+SIGKTVKSFQQAA
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAA 116


>ref|NP_001104942.1| sec-independent protein translocase protein TATA, chloroplastic
           [Zea mays] gi|75267414|sp|Q9XFJ8.1|TATA_MAIZE RecName:
           Full=Sec-independent protein translocase protein TATA,
           chloroplastic; AltName: Full=Protein THYLAKOID ASSEMBLY
           4; AltName: Full=Protein TWIN-ARGININE TRANSLOCATION A;
           Flags: Precursor gi|4877984|gb|AAD31522.1|AF145755_1
           THA4 [Zea mays]
          Length = 170

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 269 LSVRCLFGLGVPELAVIAGVAALVFGPKKLPEIGRSIGKTVKSFQQAA 412
           L  +CLFGLGVPELAVIAGVAALVFGPK+LPEIGRSIGKTVKSFQQAA
Sbjct: 80  LGCKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAA 127


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