BLASTX nr result

ID: Dioscorea21_contig00002086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002086
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284687.1| PREDICTED: protein TIC 22, chloroplastic-lik...   313   4e-83
ref|XP_002438041.1| hypothetical protein SORBIDRAFT_10g007160 [S...   311   1e-82
ref|XP_002302438.1| predicted protein [Populus trichocarpa] gi|2...   311   1e-82
ref|XP_003564106.1| PREDICTED: uncharacterized protein LOC100825...   310   4e-82
dbj|BAD35192.1| putative Tic22 [Oryza sativa Japonica Group]          305   1e-80

>ref|XP_002284687.1| PREDICTED: protein TIC 22, chloroplastic-like isoform 1 [Vitis
           vinifera] gi|359492043|ref|XP_003634356.1| PREDICTED:
           protein TIC 22, chloroplastic-like isoform 2 [Vitis
           vinifera]
          Length = 277

 Score =  313 bits (801), Expect = 4e-83
 Identities = 166/273 (60%), Positives = 194/273 (71%), Gaps = 10/273 (3%)
 Frame = -2

Query: 843 PNPSNPFDEFTSFLHRHASRVGAELSXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----- 679
           P PSNP   F++F+H+H  R+GAEL+                                  
Sbjct: 4   PKPSNPLLSFSTFIHQHCLRLGAELASRLDDTRRLAGNWPPPALRRSLPLSSLPFASMSQ 63

Query: 678 -----KHAFDVALSADYVAKTLAGTPVYTVSNSNNEFVLVSDPNNGLKSLGLLCFRHEDX 514
                K    VALS+D+VAK+LAGT VYTVSNSNNEFVL+SDPN G+KS+GLLCFR ED 
Sbjct: 64  EARGAKRDLGVALSSDHVAKSLAGTAVYTVSNSNNEFVLISDPN-GIKSIGLLCFRQEDA 122

Query: 513 XXXXXXXXLRQPVLGKGARVVPITLDQVYMLKVEGIAFRFLPDPLQIKNALELKAAERSK 334
                    R   L   ARVVPI+LDQVYMLKVEGIAFRFLPDP+QIKNALELKAA+   
Sbjct: 123 EAFLAQVQSRTRELRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALELKAADIKS 182

Query: 333 GFDGVPVFQSDLLVIKKKNKRYCPIYFQKEDIERELMKVSKTSRGFSSSQHIMVGCLEDV 154
           GFDGVPVFQSDLLV+KKKN+RYCPIYFQKEDI +EL KVS++SRG   +QHIMVG LEDV
Sbjct: 183 GFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHIMVGSLEDV 242

Query: 153 LKKMELNDKNSGWDDLIFIPPGKSYTQHINEVS 55
           L+KME ++KNSGW+DLIFIPPGKS++QHI EV+
Sbjct: 243 LRKMETSEKNSGWEDLIFIPPGKSHSQHIQEVT 275


>ref|XP_002438041.1| hypothetical protein SORBIDRAFT_10g007160 [Sorghum bicolor]
           gi|241916264|gb|EER89408.1| hypothetical protein
           SORBIDRAFT_10g007160 [Sorghum bicolor]
          Length = 283

 Score =  311 bits (797), Expect = 1e-82
 Identities = 170/286 (59%), Positives = 195/286 (68%), Gaps = 8/286 (2%)
 Frame = -2

Query: 885 RGALPPSAAPME--------SSPNPSNPFDEFTSFLHRHASRVGAELSXXXXXXXXXXXX 730
           R +LP +AAPM         +SP P NP     SFL  H SR+ + L+            
Sbjct: 10  RSSLPLAAAPMSDPTPSPYAASPPPPNPLAAAASFLQHHLSRLASHLNAPRPALAAAAAA 69

Query: 729 XXXXXXXXXXXXXXXXAKHAFDVALSADYVAKTLAGTPVYTVSNSNNEFVLVSDPNNGLK 550
                              +  +AL+ D VA+ L GTPV+TV NS+NEFVLVSDP  GL+
Sbjct: 70  ARTPGPQGA----------SLSLALAPDEVARALTGTPVFTVCNSSNEFVLVSDPATGLR 119

Query: 549 SLGLLCFRHEDXXXXXXXXXLRQPVLGKGARVVPITLDQVYMLKVEGIAFRFLPDPLQIK 370
           SLGLLCFR ED          RQPVLGKGA+VVPITLDQVYMLK EGIAFRFLPDPLQIK
Sbjct: 120 SLGLLCFRSEDADALLSHVRTRQPVLGKGAKVVPITLDQVYMLKAEGIAFRFLPDPLQIK 179

Query: 369 NALELKAAERSKGFDGVPVFQSDLLVIKKKNKRYCPIYFQKEDIERELMKVSKTSRGFSS 190
           NALE+K+   +  FDGVPVFQSDLLV+KK+ KRYCPIYFQKEDIEREL + SK SRG   
Sbjct: 180 NALEMKSGLTA--FDGVPVFQSDLLVVKKQKKRYCPIYFQKEDIERELTRASKGSRGSVL 237

Query: 189 SQHIMVGCLEDVLKKMELNDKNSGWDDLIFIPPGKSYTQHINEVSA 52
           S+ IMVG LEDVLKKME+N++NSGWDDLIFIPPGK+  QHINEVSA
Sbjct: 238 SKQIMVGSLEDVLKKMEINERNSGWDDLIFIPPGKNLNQHINEVSA 283


>ref|XP_002302438.1| predicted protein [Populus trichocarpa] gi|222844164|gb|EEE81711.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  311 bits (797), Expect = 1e-82
 Identities = 171/273 (62%), Positives = 195/273 (71%), Gaps = 6/273 (2%)
 Frame = -2

Query: 855 MESSPNPSNPFDEFTSFLHRHASRVGAELSXXXXXXXXXXXXXXXXXXXXXXXXXXXXA- 679
           ME S  PSNP    ++F+H H  R+GAE S                            A 
Sbjct: 1   MEPS-GPSNPLLSLSTFIHHHCLRLGAEFSTRISDTTRFLGGNLPPPRRLCLAPSPPFAS 59

Query: 678 -----KHAFDVALSADYVAKTLAGTPVYTVSNSNNEFVLVSDPNNGLKSLGLLCFRHEDX 514
                + A    LS+D+VAKTLAGT VYTVSNSNNEFVL+SDPN G KS+GLLCFR ED 
Sbjct: 60  VSQPKQTATTANLSSDHVAKTLAGTAVYTVSNSNNEFVLISDPN-GAKSIGLLCFRQEDA 118

Query: 513 XXXXXXXXLRQPVLGKGARVVPITLDQVYMLKVEGIAFRFLPDPLQIKNALELKAAERSK 334
                   LR+  L   A+VVPITLDQVYMLKVEGIAFRFLPDP+QIKNALELKA +   
Sbjct: 119 EAFLAQVRLRRRELRSQAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKAVDIRS 178

Query: 333 GFDGVPVFQSDLLVIKKKNKRYCPIYFQKEDIERELMKVSKTSRGFSSSQHIMVGCLEDV 154
           GFDGVPVFQSDLLV+KKKNKRYCPIYFQKEDIE+EL KVSK SRG S SQHIMVG LEDV
Sbjct: 179 GFDGVPVFQSDLLVVKKKNKRYCPIYFQKEDIEKELSKVSKASRGPSLSQHIMVGSLEDV 238

Query: 153 LKKMELNDKNSGWDDLIFIPPGKSYTQHINEVS 55
           LKKME+++K SGW+DLIFIPPGKS++QHI+E++
Sbjct: 239 LKKMEISEKKSGWEDLIFIPPGKSHSQHIHEIT 271


>ref|XP_003564106.1| PREDICTED: uncharacterized protein LOC100825582 [Brachypodium
           distachyon]
          Length = 274

 Score =  310 bits (793), Expect = 4e-82
 Identities = 169/280 (60%), Positives = 192/280 (68%), Gaps = 4/280 (1%)
 Frame = -2

Query: 879 ALPPSAAPME----SSPNPSNPFDEFTSFLHRHASRVGAELSXXXXXXXXXXXXXXXXXX 712
           +LP +AAPM     SS  P NP    +SFL  H S + +  +                  
Sbjct: 11  SLPLAAAPMSNPSPSSSPPPNPLAAASSFLQHHLSNLASRFAAPRPALAAAHPPGPQGS- 69

Query: 711 XXXXXXXXXXAKHAFDVALSADYVAKTLAGTPVYTVSNSNNEFVLVSDPNNGLKSLGLLC 532
                        +  +AL+ D VA+ L GTPV+TV NS+NEFVLVSDP  GL+SLGLLC
Sbjct: 70  -------------SLSLALAPDEVARALTGTPVFTVCNSSNEFVLVSDPATGLRSLGLLC 116

Query: 531 FRHEDXXXXXXXXXLRQPVLGKGARVVPITLDQVYMLKVEGIAFRFLPDPLQIKNALELK 352
           FR ED          RQPVLGKGA+VVPITLDQVYMLK EGIAFRFLPDPLQIKNALELK
Sbjct: 117 FRSEDADALLSHVRTRQPVLGKGAKVVPITLDQVYMLKAEGIAFRFLPDPLQIKNALELK 176

Query: 351 AAERSKGFDGVPVFQSDLLVIKKKNKRYCPIYFQKEDIERELMKVSKTSRGFSSSQHIMV 172
           +     GFDGVPVFQSDLLV+KK+ KRYCPIYFQKEDIEREL K SK S+G +  + IMV
Sbjct: 177 SG--LTGFDGVPVFQSDLLVVKKQKKRYCPIYFQKEDIERELKKASKGSKGSALLKQIMV 234

Query: 171 GCLEDVLKKMELNDKNSGWDDLIFIPPGKSYTQHINEVSA 52
           G LEDVLKKME+ND+NSGWDD+IFIPPGKS  QHINEVSA
Sbjct: 235 GSLEDVLKKMEINDRNSGWDDMIFIPPGKSLNQHINEVSA 274


>dbj|BAD35192.1| putative Tic22 [Oryza sativa Japonica Group]
          Length = 303

 Score =  305 bits (780), Expect = 1e-80
 Identities = 171/296 (57%), Positives = 196/296 (66%), Gaps = 20/296 (6%)
 Frame = -2

Query: 879 ALPPSAAPME----------SSPNPSNPFDEFTSFLHRHASRVGAELSXXXXXXXXXXXX 730
           +LP +AAPM           SS  P NP    +SFLH H SR+ +  +            
Sbjct: 17  SLPLAAAPMSNPSAPSSSSSSSSLPPNPLAAASSFLHHHLSRLASRFAAPPRPALAAVTA 76

Query: 729 XXXXXXXXXXXXXXXXAKHAFDVALSADYVAKTLAGTPVYTVSNSNNEFVLVSDPNNGLK 550
                              +  +AL+ D VA+ L GTPV+TV NS+NEFVLVSDP  GL+
Sbjct: 77  SAAPPGPQGASA-------SLSLALAPDEVARALTGTPVFTVCNSSNEFVLVSDPATGLR 129

Query: 549 SLGLLCFRHEDXXXXXXXXXLRQPVLGKGARVVPITLDQVYMLKVEGIAFRFLPDPLQIK 370
           SLGLLCFR ED         +RQPV+G+GA+VVPITLDQVYMLK EGIAFRFLPDPLQIK
Sbjct: 130 SLGLLCFRSEDADALLTHVRMRQPVVGRGAKVVPITLDQVYMLKAEGIAFRFLPDPLQIK 189

Query: 369 NALELKAAERSKGFDGVPVFQSDLLVIKKKNKRYCPIYFQK----------EDIERELMK 220
           NALELK+      FDGVPVFQSDLLV+KK+ KRYCPIYFQK          EDIEREL K
Sbjct: 190 NALELKSG--LTAFDGVPVFQSDLLVVKKQKKRYCPIYFQKVFTIFAFLAQEDIERELTK 247

Query: 219 VSKTSRGFSSSQHIMVGCLEDVLKKMELNDKNSGWDDLIFIPPGKSYTQHINEVSA 52
            SKTSRG + S+ IMVG LEDVLKKME+N++NSGWDDLIFIPPGKS  QHINEVSA
Sbjct: 248 ASKTSRGSALSKQIMVGSLEDVLKKMEMNERNSGWDDLIFIPPGKSLNQHINEVSA 303


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