BLASTX nr result

ID: Dioscorea21_contig00002064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002064
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541848.1| PREDICTED: thioredoxin M4, chloroplastic-lik...   201   2e-49
ref|NP_001047543.1| Os02g0639900 [Oryza sativa Japonica Group] g...   196   7e-48
ref|XP_003540097.1| PREDICTED: thioredoxin M4, chloroplastic-lik...   195   2e-47
gb|ABS84825.1| thioredoxin [Limonium bicolor]                         194   2e-47
ref|NP_001236067.1| uncharacterized protein LOC100526924 [Glycin...   193   6e-47

>ref|XP_003541848.1| PREDICTED: thioredoxin M4, chloroplastic-like [Glycine max]
          Length = 233

 Score =  201 bits (511), Expect = 2e-49
 Identities = 105/192 (54%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
 Frame = +2

Query: 113 SRCAMAAAILQSLPAPHCRSLSTISSSPRAAFSPVSAALDVRSSRILPKFTGLRVSRRTP 292
           S  +MA   LQSL      +L   S+ P A FSP  A    R+S  LP+++GLR+     
Sbjct: 48  SSASMATVQLQSL------TLVRSSALPSATFSPPIAVSGRRNSAALPRYSGLRLRPAAE 101

Query: 293 R-FXXXXXXXXXXXXXXXXCEAQETAIDVADVTKATWESLVLKSEGPVLVEFWAPWCGPC 469
             F                CEA +TA++VA VT A W+SLV++SE PVLVEFWAPWCGPC
Sbjct: 102 TSFPTHASSRTASRGGGVKCEAGDTAVEVAPVTDANWQSLVIESESPVLVEFWAPWCGPC 161

Query: 470 RMLIPTIGKLSKAYEGKLKCYKINTDENPDIATKYGIRSIPTVMIFKNGEKKDTIIGAVP 649
           RM+ P I +L+K Y GKLKCYK+NTDE+P  ATKYGIRSIPTV+IFKNGEKKDT+IGAVP
Sbjct: 162 RMIHPIIDELAKEYTGKLKCYKLNTDESPSTATKYGIRSIPTVIIFKNGEKKDTVIGAVP 221

Query: 650 ESTLVTSIDKFV 685
           ++TL +SI+KF+
Sbjct: 222 KTTLTSSIEKFL 233


>ref|NP_001047543.1| Os02g0639900 [Oryza sativa Japonica Group]
           gi|75323566|sp|Q6H7E4.1|TRXM1_ORYSJ RecName:
           Full=Thioredoxin M1, chloroplastic; Short=OsTrxm1;
           AltName: Full=OsTrx08; Flags: Precursor
           gi|49388235|dbj|BAD25355.1| putative Thioredoxin M-type,
           chloroplast precursor [Oryza sativa Japonica Group]
           gi|113537074|dbj|BAF09457.1| Os02g0639900 [Oryza sativa
           Japonica Group] gi|215704537|dbj|BAG94170.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218191250|gb|EEC73677.1| hypothetical protein
           OsI_08226 [Oryza sativa Indica Group]
           gi|222623322|gb|EEE57454.1| hypothetical protein
           OsJ_07676 [Oryza sativa Japonica Group]
          Length = 173

 Score =  196 bits (498), Expect = 7e-48
 Identities = 98/174 (56%), Positives = 122/174 (70%)
 Frame = +2

Query: 170 SLSTISSSPRAAFSPVSAALDVRSSRILPKFTGLRVSRRTPRFXXXXXXXXXXXXXXXXC 349
           S   +S +  AA  PV+ A      R+LP+  G+R +                       
Sbjct: 4   SALAVSVAKPAASPPVAVAAVTPQRRLLPQCRGVRAAP----VVRLRSGRARGVSVVCAA 59

Query: 350 EAQETAIDVADVTKATWESLVLKSEGPVLVEFWAPWCGPCRMLIPTIGKLSKAYEGKLKC 529
           + QET+  V DVTK+TW+SLV++SE PVLVEFWA WCGPC+M+ P IGKLSK YEGKL C
Sbjct: 60  QGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNC 119

Query: 530 YKINTDENPDIATKYGIRSIPTVMIFKNGEKKDTIIGAVPESTLVTSIDKFVGQ 691
           YK+NTDENPDIAT++GIRSIPT+MIFKNGEKKD +IGAVPESTLV+SIDK++G+
Sbjct: 120 YKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYIGR 173


>ref|XP_003540097.1| PREDICTED: thioredoxin M4, chloroplastic-like [Glycine max]
          Length = 175

 Score =  195 bits (495), Expect = 2e-47
 Identities = 98/165 (59%), Positives = 118/165 (71%), Gaps = 1/165 (0%)
 Frame = +2

Query: 194 PRAAFSPVSAALDVRSSRILPKFTGLRVS-RRTPRFXXXXXXXXXXXXXXXXCEAQETAI 370
           P AAFSP + +   R+S +LP   GLR+      R                 CEAQ+TA+
Sbjct: 14  PTAAFSPAATS---RTSVLLPHCAGLRLRPAAATRLVASPARRIASRAARVVCEAQDTAV 70

Query: 371 DVADVTKATWESLVLKSEGPVLVEFWAPWCGPCRMLIPTIGKLSKAYEGKLKCYKINTDE 550
           +VA +T A W+SLVL+SE  VLVEFWAPWCGPCRM+ P I +L+K Y GKLKCYK+NTDE
Sbjct: 71  EVAPITDANWQSLVLESESAVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKLNTDE 130

Query: 551 NPDIATKYGIRSIPTVMIFKNGEKKDTIIGAVPESTLVTSIDKFV 685
           +P  AT+YGIRSIPTVMIFKNGEKKDT+IGAVP+STL  SI+KFV
Sbjct: 131 SPSTATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFV 175


>gb|ABS84825.1| thioredoxin [Limonium bicolor]
          Length = 187

 Score =  194 bits (494), Expect = 2e-47
 Identities = 97/186 (52%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = +2

Query: 131 AAILQSLPAPHCRSLSTISSSPRAAFSPVSAALDVRSSRILPKFTGLRV-SRRTPRFXXX 307
           AA+ +S+  P    +++ + +P  + S V +    R    L KF+GLRV S  + R    
Sbjct: 2   AAVFESVSVPRSSIVTSAALAPIVSLSSVVSFSCARQPVKLAKFSGLRVISSASTRRLRP 61

Query: 308 XXXXXXXXXXXXXCEAQETAIDVADVTKATWESLVLKSEGPVLVEFWAPWCGPCRMLIPT 487
                        CE+ +TA++V  VT ++W+SLVL+S+ PVLVEFWAPWCGPCRM+ P 
Sbjct: 62  LRSSGVRRSGRVVCESPDTAVEVQSVTDSSWQSLVLESDSPVLVEFWAPWCGPCRMIHPI 121

Query: 488 IGKLSKAYEGKLKCYKINTDENPDIATKYGIRSIPTVMIFKNGEKKDTIIGAVPESTLVT 667
           I +L+K Y GKLKC+K+NTDE+P IAT+YGIRSIPTVMIFKNGEKKD +IGAVP+STL T
Sbjct: 122 IDELAKQYTGKLKCFKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDAVIGAVPKSTLTT 181

Query: 668 SIDKFV 685
           SI+KF+
Sbjct: 182 SIEKFL 187


>ref|NP_001236067.1| uncharacterized protein LOC100526924 [Glycine max]
           gi|255631161|gb|ACU15946.1| unknown [Glycine max]
          Length = 182

 Score =  193 bits (490), Expect = 6e-47
 Identities = 101/188 (53%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
 Frame = +2

Query: 125 MAAAILQSLPAPHCRSLSTISSSPRAAFSPVSAALDVRSSRILPKFTGLRVSRRTPR-FX 301
           MA   LQSL      +L   S+ P A FSP  A    R+S  LP++  LR+       F 
Sbjct: 1   MATVQLQSL------TLVRSSALPSATFSPPIALSGRRNSTALPRYACLRLRPAAETCFP 54

Query: 302 XXXXXXXXXXXXXXXCEAQETAIDVADVTKATWESLVLKSEGPVLVEFWAPWCGPCRMLI 481
                          CEA +TA++VA +T A W+SLVL+SE PVLVEFWAPWCGPCRM+ 
Sbjct: 55  TRAALRTAPRGGGVKCEAGDTAVEVAPITDANWQSLVLESESPVLVEFWAPWCGPCRMIH 114

Query: 482 PTIGKLSKAYEGKLKCYKINTDENPDIATKYGIRSIPTVMIFKNGEKKDTIIGAVPESTL 661
           P I +L+K Y G+LKCYK+NTDE+P  AT+YGIRSIPTV+IFKNGEKKDT+IGAVP++TL
Sbjct: 115 PIIDELAKEYVGRLKCYKLNTDESPSTATRYGIRSIPTVIIFKNGEKKDTVIGAVPKTTL 174

Query: 662 VTSIDKFV 685
            +SI+KF+
Sbjct: 175 TSSIEKFL 182


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