BLASTX nr result

ID: Dioscorea21_contig00002044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002044
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266328.1| PREDICTED: 60S acidic ribosomal protein P1-1...    77   5e-12
ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago tr...    72   2e-10
ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1...    68   3e-09
gb|ABB29934.1| acidic ribosomal protein P1a-like [Solanum tubero...    68   4e-09
ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...    66   1e-08

>ref|XP_002266328.1| PREDICTED: 60S acidic ribosomal protein P1-1 isoform 2 [Vitis
           vinifera] gi|225466735|ref|XP_002266284.1| PREDICTED:
           60S acidic ribosomal protein P1-1 isoform 1 [Vitis
           vinifera] gi|296089006|emb|CBI38709.3| unnamed protein
           product [Vitis vinifera]
          Length = 111

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 36/48 (75%), Positives = 39/48 (81%)
 Frame = -2

Query: 855 MSCGEQPVIYACLALHDDGIPITTEKINTLLKAANVTTEPYWAPLFAK 712
           MS GE   +YACLALHDDGIPIT EKI+TL+KAANV  EPYW  LFAK
Sbjct: 1   MSVGELAAVYACLALHDDGIPITAEKISTLVKAANVPVEPYWPLLFAK 48


>ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago truncatula]
           gi|355491416|gb|AES72619.1| 60S acidic ribosomal protein
           P1 [Medicago truncatula] gi|388507442|gb|AFK41787.1|
           unknown [Medicago truncatula]
          Length = 110

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 36/48 (75%), Positives = 36/48 (75%)
 Frame = -2

Query: 855 MSCGEQPVIYACLALHDDGIPITTEKINTLLKAANVTTEPYWAPLFAK 712
           MS GE   IYA L LHDDGIPIT EKI TLLKAANVT E YW  LFAK
Sbjct: 1   MSSGELGCIYATLILHDDGIPITAEKIGTLLKAANVTVESYWPSLFAK 48


>ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1 isoform 1 [Vitis
           vinifera] gi|297742458|emb|CBI34607.3| unnamed protein
           product [Vitis vinifera]
          Length = 111

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 33/48 (68%), Positives = 36/48 (75%)
 Frame = -2

Query: 855 MSCGEQPVIYACLALHDDGIPITTEKINTLLKAANVTTEPYWAPLFAK 712
           MS GEQ    A L LHDDGIP+T EKI+TLLKAANV+ E YW  LFAK
Sbjct: 1   MSIGEQACTLAILILHDDGIPVTAEKISTLLKAANVSVESYWPGLFAK 48


>gb|ABB29934.1| acidic ribosomal protein P1a-like [Solanum tuberosum]
          Length = 112

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 33/48 (68%), Positives = 36/48 (75%)
 Frame = -2

Query: 855 MSCGEQPVIYACLALHDDGIPITTEKINTLLKAANVTTEPYWAPLFAK 712
           MS GE    YA L LHD+ IPIT EKI+TL+KAANVT EPYW  LFAK
Sbjct: 1   MSYGEVACTYAALLLHDEDIPITAEKISTLVKAANVTVEPYWPLLFAK 48


>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/48 (64%), Positives = 35/48 (72%)
 Frame = -2

Query: 855 MSCGEQPVIYACLALHDDGIPITTEKINTLLKAANVTTEPYWAPLFAK 712
           M+ GE    YA L LHDDGIP+T+EKI TL+KAANV  E YW  LFAK
Sbjct: 1   MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAK 48


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