BLASTX nr result

ID: Dioscorea21_contig00002038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002038
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513059.1| beta-galactosidase, putative [Ricinus commun...    56   4e-06

>ref|XP_002513059.1| beta-galactosidase, putative [Ricinus communis]
            gi|223548070|gb|EEF49562.1| beta-galactosidase, putative
            [Ricinus communis]
          Length = 1110

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/72 (34%), Positives = 41/72 (56%)
 Frame = +2

Query: 2    NSYASKWRACHLDKMSVHTTHCSIEQQTDHVVQVKTVYFIVTEDQDFLSKDKDTIDETET 181
            NSY S+W+A  +D +   T  CSI+++TDH+V++K VY  V  D+D         D +++
Sbjct: 855  NSYYSRWKAARIDNLEFLTKSCSIQEKTDHLVKIKAVYIGVPRDED---------DSSQS 905

Query: 182  RGTVFFRVEVCY 217
                 F V++ Y
Sbjct: 906  SKQALFEVDIIY 917


Top