BLASTX nr result

ID: Dioscorea21_contig00000984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000984
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273349.2| PREDICTED: ATP-dependent DNA helicase 2 subu...   315   9e-84
emb|CBI38852.3| unnamed protein product [Vitis vinifera]              315   9e-84
ref|XP_002511723.1| ku P80 DNA helicase, putative [Ricinus commu...   305   1e-80
ref|XP_002320725.1| predicted protein [Populus trichocarpa] gi|2...   300   3e-79
gb|AAL87544.1|AF293344_1 KAP-2 [Phaseolus vulgaris]                   299   5e-79

>ref|XP_002273349.2| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
            vinifera]
          Length = 690

 Score =  315 bits (807), Expect = 9e-84
 Identities = 160/275 (58%), Positives = 197/275 (71%)
 Frame = -2

Query: 913  FPSFSRFPAKWLPNAHQQEASDNFVRMLDLAPSDREEMLKPEFTPNPVLERFYRYLDLKS 734
            FPSFS  PA W PN  QQEA+DN V+MLDLAPS  +E L P+ TPNPVLERFYR+L+LKS
Sbjct: 413  FPSFSNLPASWQPNEEQQEAADNLVKMLDLAPSGSKETLLPDLTPNPVLERFYRHLELKS 472

Query: 733  KQPDASVPPLDSTLKRMIEPDTDLPFQNKSAIDNFRSHFELKENPKKKKPTTLAWNDKPS 554
            K PDA+VPPLD +LK++ EPD  L  QNK  ID FR  FELKENPK KK T     ++PS
Sbjct: 473  KHPDAAVPPLDESLKKITEPDPKLLSQNKPIIDAFRRRFELKENPKLKKSTRRLLRERPS 532

Query: 553  STDNEAGADGGTSDIQRNLIQDSSVVKVEKIGDSNPIQDFEAMMARRDNPKWIMKAIQGM 374
              + EA    G+       I+++S V VEKIGDS PIQDFEAMM+ RD+P+W+ KAI  M
Sbjct: 533  GLNEEASMGDGSDGQAIKSIENTSTVGVEKIGDSTPIQDFEAMMSCRDSPEWVGKAINEM 592

Query: 373  RAYINDLLENSYRGDTFPKAIECLAALRKGCILEQEPKEFNRFLFHLYDKWKTSDLLEFF 194
            +  I DL+E+SY GD + KA+E L ALRKGC+LEQEPK+FN FL HLY   +  +L  F 
Sbjct: 593  KNKIFDLVEDSYEGDNYLKALEYLVALRKGCVLEQEPKQFNDFLHHLYKYCEKHNLNSFC 652

Query: 193  KILPSKNVTLITKTEAADSDVTEEEAKNFPLKPEP 89
            + L SK + LI KTEAADS+VTE+EA++  +K EP
Sbjct: 653  ESLASKEIMLINKTEAADSEVTEDEARSLMVKKEP 687


>emb|CBI38852.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  315 bits (807), Expect = 9e-84
 Identities = 160/275 (58%), Positives = 197/275 (71%)
 Frame = -2

Query: 913  FPSFSRFPAKWLPNAHQQEASDNFVRMLDLAPSDREEMLKPEFTPNPVLERFYRYLDLKS 734
            FPSFS  PA W PN  QQEA+DN V+MLDLAPS  +E L P+ TPNPVLERFYR+L+LKS
Sbjct: 396  FPSFSNLPASWQPNEEQQEAADNLVKMLDLAPSGSKETLLPDLTPNPVLERFYRHLELKS 455

Query: 733  KQPDASVPPLDSTLKRMIEPDTDLPFQNKSAIDNFRSHFELKENPKKKKPTTLAWNDKPS 554
            K PDA+VPPLD +LK++ EPD  L  QNK  ID FR  FELKENPK KK T     ++PS
Sbjct: 456  KHPDAAVPPLDESLKKITEPDPKLLSQNKPIIDAFRRRFELKENPKLKKSTRRLLRERPS 515

Query: 553  STDNEAGADGGTSDIQRNLIQDSSVVKVEKIGDSNPIQDFEAMMARRDNPKWIMKAIQGM 374
              + EA    G+       I+++S V VEKIGDS PIQDFEAMM+ RD+P+W+ KAI  M
Sbjct: 516  GLNEEASMGDGSDGQAIKSIENTSTVGVEKIGDSTPIQDFEAMMSCRDSPEWVGKAINEM 575

Query: 373  RAYINDLLENSYRGDTFPKAIECLAALRKGCILEQEPKEFNRFLFHLYDKWKTSDLLEFF 194
            +  I DL+E+SY GD + KA+E L ALRKGC+LEQEPK+FN FL HLY   +  +L  F 
Sbjct: 576  KNKIFDLVEDSYEGDNYLKALEYLVALRKGCVLEQEPKQFNDFLHHLYKYCEKHNLNSFC 635

Query: 193  KILPSKNVTLITKTEAADSDVTEEEAKNFPLKPEP 89
            + L SK + LI KTEAADS+VTE+EA++  +K EP
Sbjct: 636  ESLASKEIMLINKTEAADSEVTEDEARSLMVKKEP 670


>ref|XP_002511723.1| ku P80 DNA helicase, putative [Ricinus communis]
            gi|223548903|gb|EEF50392.1| ku P80 DNA helicase, putative
            [Ricinus communis]
          Length = 684

 Score =  305 bits (780), Expect = 1e-80
 Identities = 155/275 (56%), Positives = 199/275 (72%)
 Frame = -2

Query: 913  FPSFSRFPAKWLPNAHQQEASDNFVRMLDLAPSDREEMLKPEFTPNPVLERFYRYLDLKS 734
            FPSFS FPA W P+  QQEA+DN V MLDLA   +EE+L P+FTPNP+LERFY +L+LKS
Sbjct: 413  FPSFSNFPASWQPSEQQQEAADNLVMMLDLATPGKEEVLLPDFTPNPILERFYHHLELKS 472

Query: 733  KQPDASVPPLDSTLKRMIEPDTDLPFQNKSAIDNFRSHFELKENPKKKKPTTLAWNDKPS 554
            K PDA+VPPLD TLK++ EPD +L   NKS ID F   FE+KENPK+KK T     +KPS
Sbjct: 473  KHPDAAVPPLDRTLKKITEPDPELLSGNKSVIDAFCRSFEVKENPKRKKSTRRFLREKPS 532

Query: 553  STDNEAGADGGTSDIQRNLIQDSSVVKVEKIGDSNPIQDFEAMMARRDNPKWIMKAIQGM 374
             +D++   D G S I   +        VEKIGDSNP+QDFEAM++RRDNP W+ KAI+ M
Sbjct: 533  GSDDD--RDYGDSSIALAIKSGD----VEKIGDSNPVQDFEAMLSRRDNPDWVGKAIKDM 586

Query: 373  RAYINDLLENSYRGDTFPKAIECLAALRKGCILEQEPKEFNRFLFHLYDKWKTSDLLEFF 194
            +  I  ++EN Y G+ +P+A+ECLAALRKGCILEQEPK+FN FL  L+   +   L  F 
Sbjct: 587  KNKIYSIVENCYEGNNYPRALECLAALRKGCILEQEPKQFNDFLHDLFRFCQGKKLGSFC 646

Query: 193  KILPSKNVTLITKTEAADSDVTEEEAKNFPLKPEP 89
            + L SK +TLI+K+EA DS+VT++EA++F +K EP
Sbjct: 647  EFLASKELTLISKSEAIDSEVTDDEARSFFVKKEP 681


>ref|XP_002320725.1| predicted protein [Populus trichocarpa] gi|222861498|gb|EEE99040.1|
            predicted protein [Populus trichocarpa]
          Length = 700

 Score =  300 bits (768), Expect = 3e-79
 Identities = 156/274 (56%), Positives = 193/274 (70%)
 Frame = -2

Query: 913  FPSFSRFPAKWLPNAHQQEASDNFVRMLDLAPSDREEMLKPEFTPNPVLERFYRYLDLKS 734
            FPSFS FPA W PN  QQEA+DN V+MLDLAPS ++E L P+FTPNPVLERFYR+L+LKS
Sbjct: 431  FPSFSSFPASWQPNEQQQEAADNLVKMLDLAPSTKQEALLPDFTPNPVLERFYRHLELKS 490

Query: 733  KQPDASVPPLDSTLKRMIEPDTDLPFQNKSAIDNFRSHFELKENPKKKKPTTLAWNDKPS 554
            K PDA+VPPLD TLK + E D DL  + K+ +D F   FELKENP+ KK +      KPS
Sbjct: 491  KHPDAAVPPLDETLKTITEADPDLLSEKKNVMDAFYKSFELKENPRLKKSSKRLLEKKPS 550

Query: 553  STDNEAGADGGTSDIQRNLIQDSSVVKVEKIGDSNPIQDFEAMMARRDNPKWIMKAIQGM 374
                  G+D    D    L+     VKVEKIGDS+P+QDFEAMM+ RD+P W+ KAIQ M
Sbjct: 551  ------GSDEDHQDTTNALV--VKPVKVEKIGDSSPVQDFEAMMSCRDSPDWVSKAIQDM 602

Query: 373  RAYINDLLENSYRGDTFPKAIECLAALRKGCILEQEPKEFNRFLFHLYDKWKTSDLLEFF 194
            +  I  L+ENSY GD   KA+ECL ALRKGCILEQEPK+FN FL HL++  +      F 
Sbjct: 603  KNKIYSLVENSYDGDNHGKALECLLALRKGCILEQEPKQFNDFLHHLFNVRQEKKFRNFC 662

Query: 193  KILPSKNVTLITKTEAADSDVTEEEAKNFPLKPE 92
            + L  K +TLI+K+EA DS+VT++EA+NF +K E
Sbjct: 663  ESLIPKGLTLISKSEAIDSEVTDDEARNFLVKKE 696


>gb|AAL87544.1|AF293344_1 KAP-2 [Phaseolus vulgaris]
          Length = 686

 Score =  299 bits (766), Expect = 5e-79
 Identities = 157/277 (56%), Positives = 202/277 (72%)
 Frame = -2

Query: 913  FPSFSRFPAKWLPNAHQQEASDNFVRMLDLAPSDREEMLKPEFTPNPVLERFYRYLDLKS 734
            F SFS FPA WLPN  Q EA+ N V+ LDLAP  +EE+L P+FT NPVLERFYR+L+ KS
Sbjct: 414  FHSFSNFPASWLPNGQQLEAAANLVKALDLAPDGQEEVLLPDFTANPVLERFYRFLEQKS 473

Query: 733  KQPDASVPPLDSTLKRMIEPDTDLPFQNKSAIDNFRSHFELKENPKKKKPTTLAWNDKPS 554
            K PD +VPPLD TLK++ EPD DL  QNKS ID+F   FELK NP KK  +   +  K S
Sbjct: 474  KDPDIAVPPLDDTLKKITEPDADLLLQNKSVIDSFCRSFELKGNPLKK--SRRLFGGKRS 531

Query: 553  STDNEAGADGGTSDIQRNLIQDSSVVKVEKIGDSNPIQDFEAMMARRDNPKWIMKAIQGM 374
             +++E   +  T++   NLI+++SV KVEKIGD  P QDFEA+++RRD+P W++KAI  M
Sbjct: 532  FSNDEEIKENITAE-PPNLIENASV-KVEKIGDLTPAQDFEALISRRDSPDWVVKAINEM 589

Query: 373  RAYINDLLENSYRGDTFPKAIECLAALRKGCILEQEPKEFNRFLFHLYDKWKTSDLLEFF 194
            +  I DL+E+S+ GD +PKA+ECL  LRKGCILEQEPK+FN FL HL +  +   L  F 
Sbjct: 590  KNKIFDLVEDSHEGDNYPKALECLVVLRKGCILEQEPKQFNDFLKHLCNFCQEKSLHSFC 649

Query: 193  KILPSKNVTLITKTEAADSDVTEEEAKNFPLKPEPSS 83
            + L SK++TLI+KTEA DSDVT+EEA++F +K EP S
Sbjct: 650  QYLASKDLTLISKTEAVDSDVTDEEARSFLVKSEPKS 686


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