BLASTX nr result
ID: Dioscorea21_contig00000983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00000983
(997 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P93431.2|RCA_ORYSJ RecName: Full=Ribulose bisphosphate carbox... 216 2e-65
ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase ... 208 1e-64
ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase... 210 2e-64
ref|XP_004138462.1| PREDICTED: ribulose bisphosphate carboxylase... 215 3e-64
gb|ADD60243.1| rubisco activase [Glycine max] 202 3e-64
>sp|P93431.2|RCA_ORYSJ RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase,
chloroplastic; Short=RA; Short=RuBisCO activase; Flags:
Precursor gi|8918359|dbj|BAA97583.1| RuBisCO activase
large isoform precursor [Oryza sativa (japonica
cultivar-group)] gi|32352158|dbj|BAC78572.1|
ribulose-bisphosphate carboxylase activase large isoform
precursor protein [Oryza sativa Japonica Group]
gi|77552725|gb|ABA95522.1| Ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|125578108|gb|EAZ19330.1| hypothetical protein
OsJ_34880 [Oryza sativa Japonica Group]
gi|218186228|gb|EEC68655.1| hypothetical protein
OsI_37096 [Oryza sativa Indica Group]
Length = 466
Score = 216 bits (551), Expect(2) = 2e-65
Identities = 102/119 (85%), Positives = 113/119 (94%)
Frame = -3
Query: 728 GIFRTDNVPTEDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIADMGIEKIGKRLVNSR 549
GIFRTDNVP EDIVK+VD+FPGQSIDFFGALRARVYDDEVR W++D G+E IGKRLVNSR
Sbjct: 309 GIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSR 368
Query: 548 EGPPTFEQPRMTLEKLLEYGYMLVKEQENVKRVQLADKYLSEAALGDANEDAMKTGTFY 372
EGPP FEQP+MT+EKL+EYGYMLVKEQENVKRVQLA++YLSEAALGDAN DAMKTG+FY
Sbjct: 369 EGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFY 427
Score = 59.7 bits (143), Expect(2) = 2e-65
Identities = 28/39 (71%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Frame = -2
Query: 342 GQGA**V-HVPVPDGCTEPSATNFDPTARSDDGSCLYKF 229
GQGA ++PVP+GCT+P A NFDPTARSDDGSCLY F
Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYTF 466
Score = 107 bits (268), Expect = 3e-21
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = -2
Query: 993 KGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADCPTNVQLPGMYN 835
KGKMC LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYN
Sbjct: 210 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYN 262
>ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
precursor, putative [Ricinus communis]
gi|223527225|gb|EEF29388.1| Ribulose bisphosphate
carboxylase/oxygenase activase 1, chloroplast precursor,
putative [Ricinus communis]
Length = 474
Score = 208 bits (530), Expect(2) = 1e-64
Identities = 99/119 (83%), Positives = 111/119 (93%)
Frame = -3
Query: 728 GIFRTDNVPTEDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIADMGIEKIGKRLVNSR 549
GIFRTDNVP EDIVKLVDTFPGQSIDFFGA+RARVYDDEVR WI+ +G+E +GKRLVNS+
Sbjct: 318 GIFRTDNVPKEDIVKLVDTFPGQSIDFFGAIRARVYDDEVRAWISTIGVENVGKRLVNSK 377
Query: 548 EGPPTFEQPRMTLEKLLEYGYMLVKEQENVKRVQLADKYLSEAALGDANEDAMKTGTFY 372
E PPTFEQP+MTL+KLLEYG MLVKEQENVKRVQLADKYL EAALGDAN+DA++ G+FY
Sbjct: 378 EAPPTFEQPKMTLDKLLEYGSMLVKEQENVKRVQLADKYLKEAALGDANDDAIQNGSFY 436
Score = 65.5 bits (158), Expect(2) = 1e-64
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2
Query: 342 GQGA**VHVPVPDGCTEPSATNFDPTARSDDGSCLYKF 229
G+ A V VPVP+GCT+PSA NFDPTARSDDGSCLY+F
Sbjct: 437 GKAAQQVKVPVPEGCTDPSAENFDPTARSDDGSCLYEF 474
Score = 106 bits (265), Expect = 8e-21
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -2
Query: 993 KGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADCPTNVQLPGMYN 835
KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYN
Sbjct: 219 KGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYN 271
>ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
chloroplastic-like [Vitis vinifera]
gi|297740331|emb|CBI30513.3| unnamed protein product
[Vitis vinifera]
Length = 474
Score = 210 bits (535), Expect(2) = 2e-64
Identities = 99/119 (83%), Positives = 114/119 (95%)
Frame = -3
Query: 728 GIFRTDNVPTEDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIADMGIEKIGKRLVNSR 549
GIFR+DN+P ED+VKLVDTFPGQSIDFFGALRARVYDDEVR W+A +G+E IGK+LVNS+
Sbjct: 318 GIFRSDNIPKEDMVKLVDTFPGQSIDFFGALRARVYDDEVRKWVASVGVEGIGKKLVNSK 377
Query: 548 EGPPTFEQPRMTLEKLLEYGYMLVKEQENVKRVQLADKYLSEAALGDANEDAMKTGTFY 372
EGPPTFE+P+MTL+KLLEYG MLV+EQENVKRVQLADKYLSEAALGDANEDA+K+G+FY
Sbjct: 378 EGPPTFEKPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANEDAIKSGSFY 436
Score = 63.2 bits (152), Expect(2) = 2e-64
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = -2
Query: 342 GQGA**VHVPVPDGCTEPSATNFDPTARSDDGSCLYK 232
G+ A V++PVP+GCT+PSA NFDPTARSDDGSCLY+
Sbjct: 437 GKAAQQVNLPVPEGCTDPSANNFDPTARSDDGSCLYQ 473
Score = 106 bits (265), Expect = 8e-21
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -2
Query: 993 KGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADCPTNVQLPGMYN 835
KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYN
Sbjct: 219 KGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYN 271
>ref|XP_004138462.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
chloroplastic-like [Cucumis sativus]
Length = 474
Score = 215 bits (547), Expect(2) = 3e-64
Identities = 102/119 (85%), Positives = 113/119 (94%)
Frame = -3
Query: 728 GIFRTDNVPTEDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIADMGIEKIGKRLVNSR 549
GIFR+DN+P EDIVKLVDTFPGQSIDFFGALRARVYDDEVRNW+ +G+E I K+LVNS+
Sbjct: 318 GIFRSDNIPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWVCSVGVENIAKKLVNSK 377
Query: 548 EGPPTFEQPRMTLEKLLEYGYMLVKEQENVKRVQLADKYLSEAALGDANEDAMKTGTFY 372
EGPPTFEQP+MTLEKLLEYG MLV+EQENVKRVQLADKYLSEAALGDANEDA+K+GTFY
Sbjct: 378 EGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANEDAIKSGTFY 436
Score = 57.4 bits (137), Expect(2) = 3e-64
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -2
Query: 342 GQGA**VHVPVPDGCTEPSATNFDPTARSDDGSCLY 235
G+ A V +P+P+GCT+P+A NFDPTARSDDGSC Y
Sbjct: 437 GKAAQQVSLPIPEGCTDPNADNFDPTARSDDGSCNY 472
Score = 108 bits (269), Expect = 3e-21
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 993 KGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADCPTNVQLPGMYN 835
KGKMCALFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYN
Sbjct: 219 KGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYN 271
>gb|ADD60243.1| rubisco activase [Glycine max]
Length = 474
Score = 202 bits (514), Expect(2) = 3e-64
Identities = 98/119 (82%), Positives = 109/119 (91%)
Frame = -3
Query: 728 GIFRTDNVPTEDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIADMGIEKIGKRLVNSR 549
GIFRTD V EDI+KLVDTF GQSIDFFGALRARVYDDEVR WI+ +G+E IGK+LVNS+
Sbjct: 318 GIFRTDGVLKEDIIKLVDTFLGQSIDFFGALRARVYDDEVRKWISGVGVENIGKKLVNSK 377
Query: 548 EGPPTFEQPRMTLEKLLEYGYMLVKEQENVKRVQLADKYLSEAALGDANEDAMKTGTFY 372
EGPPTFEQP+MTL KLLEYG MLV+EQENVKRVQLADKYL+EAALGDAN+DA+KTG FY
Sbjct: 378 EGPPTFEQPKMTLSKLLEYGNMLVQEQENVKRVQLADKYLNEAALGDANDDAIKTGNFY 436
Score = 70.1 bits (170), Expect(2) = 3e-64
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -2
Query: 342 GQGA**VHVPVPDGCTEPSATNFDPTARSDDGSCLYKF 229
GQGA VHVPVP+GCT+P+A N+DPTARSDDGSC YKF
Sbjct: 437 GQGAQQVHVPVPEGCTDPTAENYDPTARSDDGSCTYKF 474
Score = 106 bits (265), Expect = 8e-21
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -2
Query: 993 KGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADCPTNVQLPGMYN 835
KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYN
Sbjct: 219 KGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYN 271