BLASTX nr result

ID: Dioscorea21_contig00000976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000976
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522264.1| replication factor C / DNA polymerase III ga...    84   5e-14
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
emb|CBI30725.3| unnamed protein product [Vitis vinifera]               82   2e-13
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...    82   2e-13
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...    80   4e-13

>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 38/73 (52%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = -3

Query: 836  RQNGWSRYKPISIAEKLELENLSLEPRTRSICCWRSSKITRGKVPRLRMR-RKSNSFLKV 660
            +Q GWS+ K +SIAEKLE ENL LEPR+RS+ CW++S++TR K+ RL++R RK ++ LK+
Sbjct: 1033 QQTGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRTRKPHALLKL 1092

Query: 659  ALFKRCLCARSPR 621
                +C+ ++SPR
Sbjct: 1093 VSCGKCISSKSPR 1105


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
            predicted protein [Populus trichocarpa]
          Length = 1188

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 38/73 (52%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = -3

Query: 836  RQNGWSRYKPISIAEKLELENLSLEPRTRSICCWRSSKITRGKVPRLRMR-RKSNSFLKV 660
            +Q GWS++K +SIAEKLE ENL LEPR+R + CW+++++TR K+ RL +R RK +S LK+
Sbjct: 1116 QQAGWSKHKAVSIAEKLEQENLRLEPRSRCLLCWKATRVTRRKLSRLNIRTRKPHSLLKL 1175

Query: 659  ALFKRCLCARSPR 621
                +CL ++SPR
Sbjct: 1176 VSCGKCLSSKSPR 1188


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 37/73 (50%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = -3

Query: 836  RQNGWSRYKPISIAEKLELENLSLEPRTRSICCWRSSKITRGKVPRLRMR-RKSNSFLKV 660
            +++GW++ K +SIAEKLE ENL LEPR+RS+ CW++SK+TR K+ R ++R R+ +S LK+
Sbjct: 847  QRSGWTKRKAVSIAEKLEQENLRLEPRSRSLLCWKASKVTRRKLSRFKIRTRRPHSLLKL 906

Query: 659  ALFKRCLCARSPR 621
                +CL ++SPR
Sbjct: 907  VSCGKCLSSKSPR 919


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 37/73 (50%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = -3

Query: 836  RQNGWSRYKPISIAEKLELENLSLEPRTRSICCWRSSKITRGKVPRLRMR-RKSNSFLKV 660
            +++GW++ K +SIAEKLE ENL LEPR+RS+ CW++SK+TR K+ R ++R R+ +S LK+
Sbjct: 1089 QRSGWTKRKAVSIAEKLEQENLRLEPRSRSLLCWKASKVTRRKLSRFKIRTRRPHSLLKL 1148

Query: 659  ALFKRCLCARSPR 621
                +CL ++SPR
Sbjct: 1149 VSCGKCLSSKSPR 1161


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
 Frame = -3

Query: 836  RQNGWSRYKPISIAEKLELENLSLEPRTRSICCWRSSKITRGKVPRLRMR-RKSNSFLKV 660
            +++GWS+ K +SIAEKLE ENL LEPR+RS+ CW++S++TR K+ RL++R RK  + L +
Sbjct: 1119 QRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRSRKPRALLNL 1178

Query: 659  ALFKRCLCARSPR 621
                +CL  +SPR
Sbjct: 1179 VSCGKCLSTKSPR 1191


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