BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000971
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559332.1| PREDICTED: 60S ribosomal protein L13a-4-like...   171   4e-41
gb|ACF06488.1| ribosomal protein L13a [Elaeis guineensis]             171   4e-41
pdb|3IZR|K Chain K, Localization Of The Large Subunit Ribosomal ...   170   1e-40
ref|NP_001051314.1| Os03g0756000 [Oryza sativa Japonica Group] g...   170   1e-40
ref|XP_002268901.1| PREDICTED: 60S ribosomal protein L13a-4 [Vit...   169   2e-40

>ref|XP_003559332.1| PREDICTED: 60S ribosomal protein L13a-4-like [Brachypodium
           distachyon]
          Length = 206

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = +3

Query: 39  MVSGSGICARRVVVDARQHMLGRLASILAKELLNGQRVVVVRCEEICMSGGLVRQKMKFL 218
           MVSGSG+CARRVVVDAR HMLGRLASI+AKELLNGQRVVVVRCEEICMSGGLVRQKMK+L
Sbjct: 1   MVSGSGVCARRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 60

Query: 219 RFLRKRMNTKPSHGPIHYRSPAKILWRT 302
           RFLRKRMNTKPSHGPIH+R+PAKILWRT
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRT 88


>gb|ACF06488.1| ribosomal protein L13a [Elaeis guineensis]
          Length = 206

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = +3

Query: 39  MVSGSGICARRVVVDARQHMLGRLASILAKELLNGQRVVVVRCEEICMSGGLVRQKMKFL 218
           MVSGSGIC RRVVVDAR HMLGRLASILAKELLNGQRVVVVRCEEIC+SGGLVRQKMKFL
Sbjct: 1   MVSGSGICTRRVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKFL 60

Query: 219 RFLRKRMNTKPSHGPIHYRSPAKILWRT 302
           RFLRKRMNTKPSHGPIH+R+PAKILWRT
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRT 88


>pdb|3IZR|K Chain K, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|57471706|gb|AAW50984.1| ribosomal protein
           L13a [Triticum aestivum] gi|326516494|dbj|BAJ92402.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 206

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/88 (92%), Positives = 87/88 (98%)
 Frame = +3

Query: 39  MVSGSGICARRVVVDARQHMLGRLASILAKELLNGQRVVVVRCEEICMSGGLVRQKMKFL 218
           MVSGSG+CA+RVVVDAR HMLGRLASI+AKELLNGQRVVVVRCEEICMSGGLVRQKMK+L
Sbjct: 1   MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 60

Query: 219 RFLRKRMNTKPSHGPIHYRSPAKILWRT 302
           RFLRKRMNTKPSHGPIH+R+PAKILWRT
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRT 88


>ref|NP_001051314.1| Os03g0756000 [Oryza sativa Japonica Group]
           gi|37718812|gb|AAR01683.1| putative ribosomal protein
           L13a [Oryza sativa Japonica Group]
           gi|108711156|gb|ABF98951.1| 60S ribosomal protein
           L13a-2, putative, expressed [Oryza sativa Japonica
           Group] gi|113549785|dbj|BAF13228.1| Os03g0756000 [Oryza
           sativa Japonica Group] gi|125545767|gb|EAY91906.1|
           hypothetical protein OsI_13588 [Oryza sativa Indica
           Group] gi|125587965|gb|EAZ28629.1| hypothetical protein
           OsJ_12636 [Oryza sativa Japonica Group]
           gi|215737379|dbj|BAG96308.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215741056|dbj|BAG97551.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215769213|dbj|BAH01442.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 206

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/88 (93%), Positives = 86/88 (97%)
 Frame = +3

Query: 39  MVSGSGICARRVVVDARQHMLGRLASILAKELLNGQRVVVVRCEEICMSGGLVRQKMKFL 218
           MVSGSG+CA RVVVDAR HMLGRLASI+AKELLNGQRVVVVRCEEICMSGGLVRQKMK+L
Sbjct: 1   MVSGSGVCAPRVVVDARHHMLGRLASIIAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 60

Query: 219 RFLRKRMNTKPSHGPIHYRSPAKILWRT 302
           RFLRKRMNTKPSHGPIH+RSPAKILWRT
Sbjct: 61  RFLRKRMNTKPSHGPIHFRSPAKILWRT 88


>ref|XP_002268901.1| PREDICTED: 60S ribosomal protein L13a-4 [Vitis vinifera]
           gi|147801437|emb|CAN63603.1| hypothetical protein
           VITISV_006449 [Vitis vinifera]
          Length = 206

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/88 (92%), Positives = 87/88 (98%)
 Frame = +3

Query: 39  MVSGSGICARRVVVDARQHMLGRLASILAKELLNGQRVVVVRCEEICMSGGLVRQKMKFL 218
           MVSGSGICARRVVVDAR HMLGRLASILAKELLNGQ+VVVVRCEEIC+SGGLVRQKMK+L
Sbjct: 1   MVSGSGICARRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICLSGGLVRQKMKYL 60

Query: 219 RFLRKRMNTKPSHGPIHYRSPAKILWRT 302
           RFLRKRMNTKPSHGPIH+R+P+KILWRT
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKILWRT 88