BLASTX nr result

ID: Dioscorea21_contig00000970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000970
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like ...    99   7e-19
gb|ABR17278.1| unknown [Picea sitchensis]                              92   7e-17
ref|XP_002511905.1| conserved hypothetical protein [Ricinus comm...    89   7e-16
ref|XP_004133852.1| PREDICTED: protein BPS1, chloroplastic-like ...    88   1e-15
gb|ABK94247.1| unknown [Populus trichocarpa]                           88   1e-15

>ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]
          Length = 350

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 62/136 (45%), Positives = 83/136 (61%)
 Frame = +3

Query: 3   LLVAAFSGHSKPLLLNLDVPRKFTWSVAFTDLQAYVNNEILNLFPSGKVASPREVEAVRI 182
           +  AAF+G +  L+ +L V   F WS AFTDLQ+YVN EI N F SG+V   +E+EAV  
Sbjct: 209 VFAAAFTGSANKLI-DLHVADTFLWSEAFTDLQSYVNVEIRNTFSSGRVTVLKELEAVDT 267

Query: 183 AVEKFTISNHVNCNEEALAPVRNSTQEEGLQETVSKLIKSAEELDRGLDLLSKQVNTFFK 362
           ++ K          ++ + P  + T     Q +VS L KS E+L  GLDLL+K V+ FF+
Sbjct: 268 SINKL-----YPMVQDGVGPAEDGT----FQNSVSDLGKSVEKLSEGLDLLTKDVDGFFQ 318

Query: 363 IVLTGRDALLNTLRGS 410
           +VLTGRDALL  LR S
Sbjct: 319 MVLTGRDALLCNLRVS 334


>gb|ABR17278.1| unknown [Picea sitchensis]
          Length = 376

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
 Frame = +3

Query: 3   LLVAAFSGHSKPLLLNLDVPRKFTWSVAFTDLQAYVNNEILNLFPSGKVASPREVEAVRI 182
           +LV+ F+G S PL+ +L +P +F+WS  F  LQ  VN EI   F  G+V + +E+E++  
Sbjct: 222 ILVSVFAGSSGPLV-DLSIPDQFSWSALFMTLQQEVNEEIRVGFVMGRVTALKELESLNA 280

Query: 183 AVEKFTISNHV------NCNEEALAPVRNSTQEEGLQETVSKLIKSAEELDRGLDLLSKQ 344
           AV+    +  +        NE        S Q E +++ V +L +SA+ L +GLD L+KQ
Sbjct: 281 AVKNLRSTIQMLSLDMPGGNEGGFQITEGSEQAEQIRQPVQELQQSADLLSQGLDPLTKQ 340

Query: 345 VNTFFKIVLTGRDALLNTLRGSD 413
           VN FF+I+L GR+ALL++LR S+
Sbjct: 341 VNEFFQIILKGRNALLDSLRFSE 363


>ref|XP_002511905.1| conserved hypothetical protein [Ricinus communis]
           gi|223549085|gb|EEF50574.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 381

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 60/136 (44%), Positives = 81/136 (59%)
 Frame = +3

Query: 3   LLVAAFSGHSKPLLLNLDVPRKFTWSVAFTDLQAYVNNEILNLFPSGKVASPREVEAVRI 182
           +  AAFS  SK LL+ LDV     W+ AF+DLQ  +N EI   F  GK    +E++AV  
Sbjct: 209 VFAAAFSNSSKNLLV-LDVSDTIKWAQAFSDLQTNLNVEIREKFCHGKFTVLKELDAVDS 267

Query: 183 AVEKFTISNHVNCNEEALAPVRNSTQEEGLQETVSKLIKSAEELDRGLDLLSKQVNTFFK 362
            V+K          ++ + PV    + E  + +VS L K +E+L +GLDLL+KQV+ FFK
Sbjct: 268 IVKKL-----YPMIQDGVGPV----EVEAFENSVSDLRKGSEKLSQGLDLLAKQVDGFFK 318

Query: 363 IVLTGRDALLNTLRGS 410
           IVL+GRDALL  LR S
Sbjct: 319 IVLSGRDALLCKLRES 334


>ref|XP_004133852.1| PREDICTED: protein BPS1, chloroplastic-like isoform 1 [Cucumis
           sativus] gi|449432130|ref|XP_004133853.1| PREDICTED:
           protein BPS1, chloroplastic-like isoform 2 [Cucumis
           sativus] gi|449432132|ref|XP_004133854.1| PREDICTED:
           protein BPS1, chloroplastic-like isoform 3 [Cucumis
           sativus]
          Length = 349

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
 Frame = +3

Query: 3   LLVAAFSGHSKPLLLNLDVPRKFTWSVAFTDLQAYVNNEILNLFPSGKVASPREVEAVRI 182
           +  ++FSG S+  LL  +VP  F W+ AFT+LQ YVN EI  ++ SG+  + R+V+AV  
Sbjct: 209 VFASSFSGSSE-WLLPTNVPDSFRWASAFTELQKYVNMEIKKIYSSGRFTALRDVDAVNE 267

Query: 183 AVEK---FTISNHVNCNEEALAPVRNSTQEEGLQETVSKLIKSAEELDRGLDLLSKQVNT 353
            V+K       N  +C EE              Q  + +L + AE L +G+D L+KQV+ 
Sbjct: 268 RVKKLHSMIQGNMDDCKEE-------------FQNLIVELRREAENLTQGVDHLTKQVDE 314

Query: 354 FFKIVLTGRDALLNTLRGSD 413
           FF IVL+GRD LL+ LR ++
Sbjct: 315 FFHIVLSGRDELLSNLRANE 334


>gb|ABK94247.1| unknown [Populus trichocarpa]
          Length = 354

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 58/147 (39%), Positives = 82/147 (55%)
 Frame = +3

Query: 3   LLVAAFSGHSKPLLLNLDVPRKFTWSVAFTDLQAYVNNEILNLFPSGKVASPREVEAVRI 182
           +  AAFS +SK L+ +LDVP    W+ A++DLQ  VN EI  +F  GK    +E++ V  
Sbjct: 209 VFAAAFSVNSKNLI-DLDVPNTILWAQAYSDLQTTVNGEIREVFSRGKFTFLKELDEVET 267

Query: 183 AVEKFTISNHVNCNEEALAPVRNSTQEEGLQETVSKLIKSAEELDRGLDLLSKQVNTFFK 362
            V     +N     ++ + P    T+ E    + S L + AE L + LD L+K+V+ FFK
Sbjct: 268 VV-----NNLYPMIQDGMGP----TEVEAFSSSFSDLGRRAERLSQVLDFLAKEVDGFFK 318

Query: 363 IVLTGRDALLNTLRGSDFTPQSNRDAN 443
           IVL+GRDALL  LR SD      R +N
Sbjct: 319 IVLSGRDALLCNLRVSDTVADPFRGSN 345


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