BLASTX nr result

ID: Dioscorea21_contig00000958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000958
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF42972.1|AF127241_1 arginine decarboxylase 2 [Nicotiana tab...   130   8e-29
gb|AAF42970.1|AF127239_1 arginine decarboxylase 1 [Nicotiana tab...   129   2e-28
gb|ABY47890.1| arginine decarboxylase [Oryza sativa Japonica Group]   128   4e-28
gb|EAZ35714.1| hypothetical protein OsJ_20004 [Oryza sativa Japo...   128   4e-28
ref|NP_001056695.1| Os06g0131300 [Oryza sativa Japonica Group] g...   128   4e-28

>gb|AAF42972.1|AF127241_1 arginine decarboxylase 2 [Nicotiana tabacum]
          Length = 721

 Score =  130 bits (328), Expect = 8e-29
 Identities = 64/120 (53%), Positives = 86/120 (71%)
 Frame = +1

Query: 1   AIVRSVQFACDRKSVRHPIICSESGRALVSHHSVLIFEAISAASPDQASXXXXXXXXXXX 180
           A+V++VQ+ CDRK V+HP+ICSESGRA+VSHHS+LIFEA+SA+S   +S           
Sbjct: 369 AVVQAVQYVCDRKGVKHPVICSESGRAIVSHHSILIFEAVSASSHSCSS----------- 417

Query: 181 XXXXXXXXXXXXXXXSDESRADYRNLMAAAVRGEYQTCVLYAEQLKRRCVDEFKDGLLGL 360
                          ++++ ADYRNL AAAVRGEY+TCVLY++QLK+RCVD+FK+G LG+
Sbjct: 418 SHLSSGGLQSMAETLNEDALADYRNLSAAAVRGEYETCVLYSDQLKQRCVDQFKEGSLGI 477


>gb|AAF42970.1|AF127239_1 arginine decarboxylase 1 [Nicotiana tabacum]
           gi|7230373|gb|AAF42971.1|AF127240_1 arginine
           decarboxylase 1 [Nicotiana tabacum]
          Length = 720

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/119 (52%), Positives = 85/119 (71%)
 Frame = +1

Query: 4   IVRSVQFACDRKSVRHPIICSESGRALVSHHSVLIFEAISAASPDQASXXXXXXXXXXXX 183
           +V++VQ+ CDRK V+HP+ICSESGRA+VSHHS+LIFEA+SA+S   +S            
Sbjct: 369 VVQAVQYVCDRKGVKHPVICSESGRAIVSHHSILIFEAVSASSHSCSS-----------S 417

Query: 184 XXXXXXXXXXXXXXSDESRADYRNLMAAAVRGEYQTCVLYAEQLKRRCVDEFKDGLLGL 360
                         ++++ ADYRNL AAAVRGEY+TCVLY++QLK+RCVD+FK+G LG+
Sbjct: 418 HLSSGGLQSMAETLNEDALADYRNLSAAAVRGEYETCVLYSDQLKQRCVDQFKEGSLGI 476


>gb|ABY47890.1| arginine decarboxylase [Oryza sativa Japonica Group]
          Length = 702

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/120 (55%), Positives = 79/120 (65%)
 Frame = +1

Query: 1   AIVRSVQFACDRKSVRHPIICSESGRALVSHHSVLIFEAISAASPDQASXXXXXXXXXXX 180
           A+V +V   CDRK V HPIICSESGRALVSHHSVL+FEA SA++P +             
Sbjct: 368 AVVAAVGRVCDRKGVAHPIICSESGRALVSHHSVLVFEAFSASAPGRIDPATGYLLDEL- 426

Query: 181 XXXXXXXXXXXXXXXSDESRADYRNLMAAAVRGEYQTCVLYAEQLKRRCVDEFKDGLLGL 360
                          +D+  ADYRNLMAAAVRG++ TC LYA+QLKRRC D+FKDG+LGL
Sbjct: 427 ---------------TDDCHADYRNLMAAAVRGDFDTCALYADQLKRRCADQFKDGVLGL 471


>gb|EAZ35714.1| hypothetical protein OsJ_20004 [Oryza sativa Japonica Group]
          Length = 651

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/120 (55%), Positives = 79/120 (65%)
 Frame = +1

Query: 1   AIVRSVQFACDRKSVRHPIICSESGRALVSHHSVLIFEAISAASPDQASXXXXXXXXXXX 180
           A+V +V   CDRK V HPIICSESGRALVSHHSVL+FEA SA++P +             
Sbjct: 317 AVVAAVGRVCDRKGVAHPIICSESGRALVSHHSVLVFEAFSASAPGRIDPATGYLLDEL- 375

Query: 181 XXXXXXXXXXXXXXXSDESRADYRNLMAAAVRGEYQTCVLYAEQLKRRCVDEFKDGLLGL 360
                          +D+  ADYRNLMAAAVRG++ TC LYA+QLKRRC D+FKDG+LGL
Sbjct: 376 ---------------TDDCHADYRNLMAAAVRGDFDTCALYADQLKRRCADQFKDGVLGL 420


>ref|NP_001056695.1| Os06g0131300 [Oryza sativa Japonica Group]
           gi|12229999|sp|Q9SNN0.1|SPE1_ORYSJ RecName:
           Full=Arginine decarboxylase 1; Short=ARGDC1;
           Short=OsADC1 gi|6006369|dbj|BAA84799.1| arginine
           decarboxylase [Oryza sativa Japonica Group]
           gi|47716667|gb|AAT37534.1| arginine decarboxylase [Oryza
           sativa] gi|113594735|dbj|BAF18609.1| Os06g0131300 [Oryza
           sativa Japonica Group] gi|125553918|gb|EAY99523.1|
           hypothetical protein OsI_21492 [Oryza sativa Indica
           Group]
          Length = 702

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/120 (55%), Positives = 79/120 (65%)
 Frame = +1

Query: 1   AIVRSVQFACDRKSVRHPIICSESGRALVSHHSVLIFEAISAASPDQASXXXXXXXXXXX 180
           A+V +V   CDRK V HPIICSESGRALVSHHSVL+FEA SA++P +             
Sbjct: 368 AVVAAVGRVCDRKGVAHPIICSESGRALVSHHSVLVFEAFSASAPGRIDPATGYLLDEL- 426

Query: 181 XXXXXXXXXXXXXXXSDESRADYRNLMAAAVRGEYQTCVLYAEQLKRRCVDEFKDGLLGL 360
                          +D+  ADYRNLMAAAVRG++ TC LYA+QLKRRC D+FKDG+LGL
Sbjct: 427 ---------------TDDCHADYRNLMAAAVRGDFDTCALYADQLKRRCADQFKDGVLGL 471


Top